Hmdb loader
Identification
HMDB Protein ID HMDBP07850
Secondary Accession Numbers
  • 13559
Name Neuronal pentraxin-2
Synonyms
  1. NP-II
  2. NP2
  3. Neuronal pentraxin II
Gene Name NPTX2
Protein Type Unknown
Biological Properties
General Function Involved in metal ion binding
Specific Function Likely to play role in the modification of cellular properties that underlie long-term plasticity. Binds to agar matrix in a calcium-dependent manner
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location
  1. Secreted
Gene Properties
Chromosome Location Chromosome:7
Locus 7q21.3-q22.1
SNPs NPTX2
Gene Sequence
>1296 bp
ATGCTGGCGCTGCTGGCCGCCAGCGTGGCGCTCGCCGTGGCCGCTGGGGCCCAGGACAGC
CCGGCGCCCGGTAGCCGCTTCGTGTGCACGGCACTGCCCCCAGAGGCGGTGCACGCCGGC
TGCCCGCTGCCCGCGATGCCCATGCAGGGCGGCGCGCAGAGTCCCGAGGAGGAGCTGAGG
GCCGCGGTGCTGCAGCTGCGCGAGACCGTCGTGCAGCAGAAGGAGACGCTGGGCGCGCAG
CGCGAGGCCATCCGCGAGCTCACGGGCAAGCTAGCGCGCTGCGAGGGGCTGGCGGGCGGC
AAGGCGCGCGGCGCGGGGGCCACGGGCAAGGACACTATGGGCGACCTGCCGCGGGACCCC
GGCCACGTCGTGGAGCAGCTCAGCCGCTCGCTGCAGACCCTCAAGGACCGCCTGGAGAGC
CTCGAGCACCAGCTCAGAGCAAACGTGTCCAATGCTGGGCTGCCCGGCGACTTCCGCGAG
GTGCTCCAGCAGCGGCTGGGGGAGCTGGAGAGGCAGCTTCTGCGCAAGGTGGCAGAGCTG
GAGGACGAGAAGTCCCTGCTGCACAATGAGACCTCGGCTCACCGGCAGAAGACCGAGAGC
ACCCTGAACGCGCTGCTGCAGAGGGTCACCGAGCTGGAGCGAGGCAATAGCGCCTTTAAG
TCACCAGATGCGTTCAAGGTGTCCCTCCCACTCCGCACAAACTACCTATACGGCAAGATC
AAGAAGACGCTGCCTGAGCTGTACGCCTTCACCATCTGCCTGTGGCTGCGGTCCAGCGCC
TCACCAGGCATTGGCACCCCCTTCTCCTATGCGGTGCCAGGGCAGGCCAACGAGATCGTG
CTGATCGAGTGGGGCAACAACCCCATCGAGCTGCTCATCAACGACAAGGTTGCGCAGCTG
CCCCTGTTTGTCAGTGACGGCAAGTGGCACCACATCTGTGTCACCTGGACGACACGGGAT
GGCATGTGGGAGGCATTCCAGGACGGAGAGAAGCTGGGCACTGGGGAGAACCTGGCCCCC
TGGCACCCCATCAAGCCCGGGGGCGTGCTGATCCTTGGACAAGAGCAGGACACCGTGGGG
GGTAGGTTTGATGCCACTCAGGCATTTGTCGGGGAGCTCAGCCAGTTCAACATATGGGAC
CGCGTCCTTCGCGCACAAGAAATTGTCAACATCGCCAACTGCTCCACAAACATGCCGGGC
AACATCATCCCGTGGGTGGACAATAACGTCGATGTGTTCGGAGGGGCCTCCAAGTGGCCC
GTGGAGACGTGTGAGGAGCGTCTCCTTGACTTGTAG
Protein Properties
Number of Residues 431
Molecular Weight 47041.2
Theoretical pI 5.34
Pfam Domain Function
Signals
  • 1-15
Transmembrane Regions
  • None
Protein Sequence
>Neuronal pentraxin-2
MLALLAASVALAVAAGAQDSPAPGSRFVCTALPPEAVHAGCPLPAMPMQGGAQSPEEELR
AAVLQLRETVVQQKETLGAQREAIRELTGKLARCEGLAGGKARGAGATGKDTMGDLPRDP
GHVVEQLSRSLQTLKDRLESLEHQLRANVSNAGLPGDFREVLQQRLGELERQLLRKVAEL
EDEKSLLHNETSAHRQKTESTLNALLQRVTELERGNSAFKSPDAFKVSLPLRTNYLYGKI
KKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEWGNNPIELLINDKVAQL
PLFVSDGKWHHICVTWTTRDGMWEAFQDGEKLGTGENLAPWHPIKPGGVLILGQEQDTVG
GRFDATQAFVGELSQFNIWDRVLRAQEIVNIANCSTNMPGNIIPWVDNNVDVFGGASKWP
VETCEERLLDL
GenBank ID Protein 37574283
UniProtKB/Swiss-Prot ID P47972
UniProtKB/Swiss-Prot Entry Name NPTX2_HUMAN
PDB IDs Not Available
GenBank Gene ID AC074121
GeneCard ID NPTX2
GenAtlas ID NPTX2
HGNC ID HGNC:7953
References
General References
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  3. Hillier LW, Fulton RS, Fulton LA, Graves TA, Pepin KH, Wagner-McPherson C, Layman D, Maas J, Jaeger S, Walker R, Wylie K, Sekhon M, Becker MC, O'Laughlin MD, Schaller ME, Fewell GA, Delehaunty KD, Miner TL, Nash WE, Cordes M, Du H, Sun H, Edwards J, Bradshaw-Cordum H, Ali J, Andrews S, Isak A, Vanbrunt A, Nguyen C, Du F, Lamar B, Courtney L, Kalicki J, Ozersky P, Bielicki L, Scott K, Holmes A, Harkins R, Harris A, Strong CM, Hou S, Tomlinson C, Dauphin-Kohlberg S, Kozlowicz-Reilly A, Leonard S, Rohlfing T, Rock SM, Tin-Wollam AM, Abbott A, Minx P, Maupin R, Strowmatt C, Latreille P, Miller N, Johnson D, Murray J, Woessner JP, Wendl MC, Yang SP, Schultz BR, Wallis JW, Spieth J, Bieri TA, Nelson JO, Berkowicz N, Wohldmann PE, Cook LL, Hickenbotham MT, Eldred J, Williams D, Bedell JA, Mardis ER, Clifton SW, Chissoe SL, Marra MA, Raymond C, Haugen E, Gillett W, Zhou Y, James R, Phelps K, Iadanoto S, Bubb K, Simms E, Levy R, Clendenning J, Kaul R, Kent WJ, Furey TS, Baertsch RA, Brent MR, Keibler E, Flicek P, Bork P, Suyama M, Bailey JA, Portnoy ME, Torrents D, Chinwalla AT, Gish WR, Eddy SR, McPherson JD, Olson MV, Eichler EE, Green ED, Waterston RH, Wilson RK: The DNA sequence of human chromosome 7. Nature. 2003 Jul 10;424(6945):157-64. [PubMed:12853948 ]
  4. Hsu YC, Perin MS: Human neuronal pentraxin II (NPTX2): conservation, genomic structure, and chromosomal localization. Genomics. 1995 Jul 20;28(2):220-7. [PubMed:8530029 ]