Showing Protein Protocadherin gamma-C4 (HMDBP07930)
Identification | ||||||||||||||||
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HMDB Protein ID | HMDBP07930 | |||||||||||||||
Secondary Accession Numbers |
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Name | Protocadherin gamma-C4 | |||||||||||||||
Synonyms |
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Gene Name | PCDHGC4 | |||||||||||||||
Protein Type | Unknown | |||||||||||||||
Biological Properties | ||||||||||||||||
General Function | Involved in calcium ion binding | |||||||||||||||
Specific Function | Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain | |||||||||||||||
Pathways | Not Available | |||||||||||||||
Reactions | Not Available | |||||||||||||||
GO Classification |
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Cellular Location |
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Gene Properties | ||||||||||||||||
Chromosome Location | Chromosome:5 | |||||||||||||||
Locus | 5q31 | |||||||||||||||
SNPs | PCDHGC4 | |||||||||||||||
Gene Sequence |
>2817 bp ATGCTCCGCAAGGTGAGAAGCTGGACAGAAATCTGGCGGTGGGCTACCCTTTTGTTCCTC TTTTACCACCTGGGTTACGTTTGTGGGCAGATCCGCTACCCGGTCCCAGAGGAGTCACAG GAAGGGACTTTTGTAGGGAATGTCGCTCAAGATTTCCTGCTGGATACGGACAGTCTGTCA GCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGGATTTGGAC AGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAGTGCC AGCTGCATCGTGCCCCTGGAGTTTGTCACCGAAGGTCCTTTGGAAATGTACCGAGCAGAG GTAGAGATCGTAGATGTGAATGATCACGCCCCCCGTTTTCCGCGGCAGCAGCTGGACTTG GAAATTGGGGAGGCAGCTCCTCCAGGACAGCGTTTCCCGTTGGAAAAGGCTCAGGATGCA GATGTGGGGAGCAATTCGATTAGCAGCTATAGGCTGAGCTCCAATGAACACTTTGCACTG GATGTGAAGAAGCGCAGCGACGGCAGCCTGGTCCCAGAGCTGCTCCTGGAGAAGCCTTTG GATCGAGAGAAGCAATCGGACTACCGCCTGGTGCTGACTGCTGTCGATGGAGGGAACCCG CCGAGATCTGGCACCGCAGAGCTCCGGGTATCCGTGCTGGACGTAAACGACAACGCCCCA GCCTTCCAGCAATCCAGCTACAGGATTAGTGTGTTGGAGAGCGCACCAGCGGGCATGGTG CTCATCCAGCTCAATGCCTCAGACCCGGACCTGGGTCCCAGTGGTAACGTCACCTTTTAT TTCAGTGGTCATACCCCTGATCGTGTAAGAAACCTCTTTAGCCTGCACCCCACTACTGGA AAGCTTACTCTTTTGGGGCCCCTAGACTTTGAGAGTGAGAATTACTATGAATTTGATGTG CGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTG CTGGACGTAAATGACAATGCCCCTTACATCACAGTGACCTCAGAGCTTGGAACCCTCCCC GAGAGTGCAGAACCTGGCACTGTGGTGGCACTTATCAGTGTGCAGGATCCAGACTCAGGG TCAAACGGAGATGTGAGCCTCCGCATTCCTGACCACTTGCCATTTGCCCTCAAGTCTGCC TTCAGGAACCAGTTCTCCCTGGTGACTGCTGGACCCTTGGATCGAGAGGCCAAATCTAGC TATGACATCATGGTCACTGCTTCTGATGCTGGGAACCCTCCTCTCAGTACCCACAGAACT ATTTTCCTCAATATTTCAGATGTGAATGATAATCCACCCTCTTTCTTTCAGAGGTCACAT GAGGTGTTTGTTCCTGAGAACAATCGCCCAGGGGACCTGCTTTGCTCCCTTGCAGCCTCT GACCCAGACTCTGGCTTGAATGCGCTTATCTCCTACTCACTCCTGGAGCCCAGGAATCGA GATGTATCAGCTTCCTCTTTCATCTCTCTGAACCCCCAGACAGGAGCTGTTCATGCTACT CGATCCTTTGACTATGAGCAAACCCAGACACTGCAGTTTGAGGTGCAGGCCCGGGATCGG GGCAACCCACCCCTTAGCAGCACTGTAACAGTTCGTCTATTTGTGCTGGACCTCAATGAC AATGCTCCAGCTGTGCTCCGTCCTCGGGCCCGGCCTGGTTCCTTATGTCCCCAAGCACTG CCTCCATCAGTTGGTGCTGGCCACCTAATCACAAAGGTGACTGCTGTGGACTTGGATTCA GGTTACAATGCTTGGGTTTCCTATCAGCTCCTGGAGGCCCCAGATCCCAGCCTGTTTGCA GTCTCTCGATATGCTGGGGAGGTGCGGACGGCTGTTCCTATCCCAGCTGACCTCCCACCA CAGAAGCTGGTCATTGTGGTAAAGGATAGTGGTAGTCCACCACTCTCTACCTCTGTTACT CTCTTAGTGTCCTTAGAGGAAGACACTCATCCAGTTGTCCCAGATCTTCGAGAATCTTCA GCTCCAAGGGAAGGAGAATCTCGTCTAACCCTCTACTTGGCTGTGTCCCTAGTGGCAATT TGCTTTGTCTCCTTTGGCTCATTCGTGGCACTACTCTCTAAGTGTCTTCGTGGGGCAGCC TGTGGAGTCACATGCTTTCCTGCTGGCACCTGTGCCTGTCTCACCAGATCTCGAAGGAGG GAGGGGCTTCCCCCTTCCAATGGGATCCTCCGAATCCAGCTAGGGTCAGATGACCCTATC AAGTTTGTTGATGTGGGAGGCCACTCTCATGGCTGTACACCCTTGGCTTCTGCACCCACT CGGAGTGATAGCTTCATGATGGTGAAGTCACCCAGTGCACCTATGGCAGGGGAGCCTGTT CGCCCAAGCTGCCCACCCTCTGATCTTCTCTATGGGCTAGAGCAAGCCCCGCCCAACACG GACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGAC ACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCG TCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGA TTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAAT GTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAG GCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA |
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Protein Properties | ||||||||||||||||
Number of Residues | 938 | |||||||||||||||
Molecular Weight | 101212.6 | |||||||||||||||
Theoretical pI | 4.97 | |||||||||||||||
Pfam Domain Function | ||||||||||||||||
Signals |
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Transmembrane Regions |
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Protein Sequence |
>Protocadherin gamma-C4 MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLS ARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAE VEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFAL DVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAP AFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTG KLTLLGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELGTLP ESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSS YDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAAS DPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDR GNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS GYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVT LLVSLEEDTHPVVPDLRESSAPREGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGAA CGVTCFPAGTCACLTRSRRREGLPPSNGILRIQLGSDDPIKFVDVGGHSHGCTPLASAPT RSDSFMMVKSPSAPMAGEPVRPSCPPSDLLYGLEQAPPNTDWRFSQAQRPGTSGSQNGDD TGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQN VYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK |
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External Links | ||||||||||||||||
GenBank ID Protein | 5456982 | |||||||||||||||
UniProtKB/Swiss-Prot ID | Q9Y5F7 | |||||||||||||||
UniProtKB/Swiss-Prot Entry Name | PCDGL_HUMAN | |||||||||||||||
PDB IDs | Not Available | |||||||||||||||
GenBank Gene ID | AF152338 | |||||||||||||||
GeneCard ID | PCDHGC4 | |||||||||||||||
GenAtlas ID | PCDHGC4 | |||||||||||||||
HGNC ID | HGNC:8717 | |||||||||||||||
References | ||||||||||||||||
General References |
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