Showing Protein Protocadherin gamma-C5 (HMDBP07931)
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| HMDB Protein ID | HMDBP07931 | |||||||||||||||
| Secondary Accession Numbers |
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| Name | Protocadherin gamma-C5 | |||||||||||||||
| Synonyms |
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| Gene Name | PCDHGC5 | |||||||||||||||
| Protein Type | Unknown | |||||||||||||||
| Biological Properties | ||||||||||||||||
| General Function | Involved in calcium ion binding | |||||||||||||||
| Specific Function | Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain | |||||||||||||||
| Pathways | Not Available | |||||||||||||||
| Reactions | Not Available | |||||||||||||||
| GO Classification |
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| Cellular Location |
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| Gene Properties | ||||||||||||||||
| Chromosome Location | Chromosome:5 | |||||||||||||||
| Locus | 5q31 | |||||||||||||||
| SNPs | PCDHGC5 | |||||||||||||||
| Gene Sequence |
>2835 bp ATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCC TTGTGCTGCTGGGGCTGGGTGTCTGGGCAGCTTCGTTACTCAGTGGTGGAGGAGTCTGAG CCGGGGACGCTGGTGGGGAATGTTGCTCAGGATCTGGGCTTAAAGATGACAGATCTGTTG AGCCGGCGGCTGCAATTGGGCTCTGAGGAGAATGGGCGCTATTTTTCCCTGAGCTTGATG AGTGGTGCCCTGGCAGTGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCAGCACC AGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCCTGGAGCTAATCCGTGTAGAG GTAGAGATCCTGGATCTCAATGACAACTCTCCTAGCTTTGCCACCCCTGAGCGAGAGATG CGCATCTCAGAATCAGCAGCATCTGGGGCACGATTCCCACTGGACAGTGCCCAGGATCCG GATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACAGCCACTTCTCTCTG AATGTGAAGACCCTAAAAGATGGGAAGCCATTCCCAGAGCTGGTGCTAGAGCAGCAGCTG GATCGTGAAGCCCAGGCAAGACATCAGCTGGTGCTTACTGCTGTGGATGGGGGGACCCCA GCCCGCTCAGGGACCACCCTTATCTCTGTCATCGTGCTGGACATCAATGATAATGCTCCA ACCTTCCAATCCTCAGTTCTACGTGTGGGAATCCCAGAGAATGCACCCATTGGTACTCTG CTGCTCCGCCTCAATGCCACTGATCCAGACGAGGGCACCAACGGCCAACTAGACTATTCT TTTGGAGACCACACATCTGAGGCAGTGCGGAACCTCTTTGGCCTAGACCCTAGCAGTGGG GCAATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTTCTATGAAATTCATGCA AGAGCCCGTGACCAGGGACAGCCTGCCATGGAGGGCCACTGTGTGATTCAAGTGGATGTG GGGGATGTCAATGACAATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTA GAGAGCACACCAGTGGGCACAGTAGTGGGGTTGTTTAATGTGCGAGACCGGGACTCAGGT AGAAATGGTGAAGTGAGCCTTGATATCTCTCCGGACCTGCCATTTCAGATTAAGCCTTCT GAGAACCACTACTCGCTGCTAACCAGCCAGCCTTTGGACCGGGAGGCCACATCCCACTAT ATCATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCCTACACAAACATCTCACCATC AGGCTCAACATTTCAGATGTCAATGACAATGCACCCCGCTTCAACCAGCAGCTTTACACT GCTTACATCCTAGAAAACCGGCCTCCGGGCTCCCTTCTTTGCACTGTGGCTGCCTCAGAT CCAGACACTGGGGATAATGCCCGCCTCACCTACTCCATTGTAGGAAATCAGGTTCAGGGA GCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGCCCAGCGT ACCTTTGACTATGAATTGCTGCAGATGCTGCAGATTGTGGTGGGGGTTCGAGACTCCGGC TCTCCCCCATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAAT GCCCCAGCTGTGCTGCACCCACGGCCAGACTGGGAACACTCAGCCCCCCAGCGTCTCCCT CGCTCTGCTCCTCCTGGCTCCTTGGTCACCAAGGTGACAGCCGTGGATGCTGATGCAGGC CACAATGCGTGGCTCTCCTACTCACTGTTGCCACAGTCCACAGCCCCAGGACTGTTCCTC GTGTCTACACACACTGGTGAGGTGCGCACAGCCCGGGCCTTACTGGAGGATGACTCTGAC ACCCAGCAGGTGGTGGTCCTGGTGAGGGACAATGGTGACCCTTCACTCTCCTCCACAGCC ACAGTGCTGCTGGTTCTGGAGGATGAGGACCCTGAGGAAATGCCCAAATCCAGTGACTTC CTCATACACCCTCCTGAGCGTTCAGACCTTACCCTTTACCTCATTGTGGCTCTAGCGACC GTCAGTCTCTTATCCCTAGTCACCTTCACCTTTCTGTCAGCGAAGTGCCTTCAGGGAAAC GCAGACGGGGACGGGGGTGGAGGGCAGTGCTGCAGGCGCCAGGACTCACCCTCCCCGGAC TTCTATAAGCAGTCCAGCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATG GAGGTGACGCTGCGGCCCACAGACTCGCAGAGCCACTGCTACAGGACGTGCTTTTCACCG GCCTCGGACGGCAGTGACTTCACTTTTCTAAGACCCCTCAGCGTTCAGCAGCCCACAGCT CTGGCGCTGGAGCCTGACGCCATCCGGTCCCGCTCTAATACGCTGCGGGAGCGGAGCCAG CAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGC TCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTG CAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGG GGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTG CCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCT GGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAG AAGGAGAAGAAGTAA |
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| Protein Properties | ||||||||||||||||
| Number of Residues | 944 | |||||||||||||||
| Molecular Weight | 101919.7 | |||||||||||||||
| Theoretical pI | 4.63 | |||||||||||||||
| Pfam Domain Function | ||||||||||||||||
| Signals |
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| Transmembrane Regions |
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| Protein Sequence |
>Protocadherin gamma-C5 MGPKTLPQLAGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKMTDLL SRRLQLGSEENGRYFSLSLMSGALAVNQKIDRESLCGASTSCLLPVQVVTEHPLELIRVE VEILDLNDNSPSFATPEREMRISESAASGARFPLDSAQDPDVGTNTVSFYTLSPNSHFSL NVKTLKDGKPFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAP TFQSSVLRVGIPENAPIGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSG AIHVLGPIDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLANPVL ESTPVGTVVGLFNVRDRDSGRNGEVSLDISPDLPFQIKPSENHYSLLTSQPLDREATSHY IIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILENRPPGSLLCTVAASD PDTGDNARLTYSIVGNQVQGAPASSFVYVNPEDGRIFAQRTFDYELLQMLQIVVGVRDSG SPPLHANTSLHVFVLDENDNAPAVLHPRPDWEHSAPQRLPRSAPPGSLVTKVTAVDADAG HNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTA TVLLVLEDEDPEEMPKSSDFLIHPPERSDLTLYLIVALATVSLLSLVTFTFLSAKCLQGN ADGDGGGGQCCRRQDSPSPDFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP ASDGSDFTFLRPLSVQQPTALALEPDAIRSRSNTLRERSQQAPPNTDWRFSQAQRPGTSG SQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHV PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK |
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| External Links | ||||||||||||||||
| GenBank ID Protein | 5456984 | |||||||||||||||
| UniProtKB/Swiss-Prot ID | Q9Y5F6 | |||||||||||||||
| UniProtKB/Swiss-Prot Entry Name | PCDGM_HUMAN | |||||||||||||||
| PDB IDs | Not Available | |||||||||||||||
| GenBank Gene ID | AF152339 | |||||||||||||||
| GeneCard ID | PCDHGC5 | |||||||||||||||
| GenAtlas ID | PCDHGC5 | |||||||||||||||
| HGNC ID | HGNC:8718 | |||||||||||||||
| References | ||||||||||||||||
| General References |
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