Hmdb loader
Survey
Identification
HMDB Protein ID HMDBP08455
Secondary Accession Numbers
  • 14167
Name Interferon-inducible GTPase 5
Synonyms
  1. Immunity-related GTPase cinema 1
Gene Name IRGC
Protein Type Unknown
Biological Properties
General Function Involved in GTP binding
Specific Function Not Available
Pathways Not Available
Reactions
Guanosine triphosphate + Water → Guanosine diphosphate + Phosphate details
GO Classification
Cellular Component
membrane
Component
membrane
cell part
Function
purine nucleotide binding
binding
nucleotide binding
catalytic activity
hydrolase activity
guanyl nucleotide binding
guanyl ribonucleotide binding
gtp binding
hydrolase activity, acting on acid anhydrides
Molecular Function
hydrolase activity, acting on acid anhydrides
GTP binding
Cellular Location
  1. Cytoplasmic
Gene Properties
Chromosome Location 19
Locus 19q13.31
SNPs IRGC
Gene Sequence
>1392 bp
ATGGCTACTTCAAAGTTGCCCGTGGTGCCTGGGGAGGAGGAAAACACCATCCTTATGGCC
AAGGAAAGGCTGGAGGCCCTGCGCACAGCCTTTGAGTCGGGTGACCTCCCCCAGGCCGCC
TCTCACCTCCAGGAGCTGCTGGCCTCCACGGAAAGCATCCGCCTGGAGGTGGGCGTCACG
GGCGAGTCGGGCGCGGGCAAGTCCTCCCTCATCAATGCCCTGCGTGGCCTGGAGGCCGAG
GACCCTGGCGCGGCTCTCACGGGCGTCATGGAGACCACGATGCAACCGTCGCCCTATCCA
CACCCACAGTTCCCTGACGTGACCCTCTGGGACCTGCCAGGAGCCGGCTCTCCAGGCTGC
CCGGCTGACAAGTACCTAAAGCAGGTAGACTTCAGCCGCTATGACTTCTTCCTGCTGGTC
TCCCCCCGCCGCTGCGGGGCCGTCGAGACCCGCCTGGCCGCTGAGATCCTGTGCCAGGGC
AAGAAGTTCTACTTTGTGCGCACCAAGGTGGACGAGGACCTGGCGGCCACGCGCACCCAG
CGGCCGTCGGGCTTCAGAGAGGCCGCTGTCCTGCAGGAGATCCGAGACCACTGTGCCGAG
CGGCTGCGGGAGGCCGGCGTGGCTGACCCTCGCATCTTCCTGGTGTCCAACCTCTCGCCG
GCCCGCTACGACTTTCCCACGCTGGTGTCCACCTGGGAGCACGACCTGCCCTCCCACCGG
CGCCACGCTGGCCTGCTGTCGCTCCCCGACATCTCGCTGGAGGCCTTGCAGAAGAAGAAG
GCCATGCTTCAAGAGCAAGTCCTCAAGACCGCCCTGGTGTTGGGCGTCATCCAGGCCCTG
CCGGTCCCAGGGCTGGCGGCCGCCTACGATGATGCGTTGCTCATCCACTCACTGCGTGGC
TACCACCGCAGCTTTGGTCTGGACGACGACTCGCTGGCCAAGCTGGCCGAGCAGGTGGGC
AAACAGGCAGGTGACCTGCGCTCGGTCATCCGCTCCCCACTGGCCAACGAGGTCTCGCCT
GAGACTGTCCTGCGGCTCTATTCCCAGTCGTCCGACGGCGCCATGCGGGTGGCCCGCGCC
TTTGAGAGGGGCATCCCTGTGTTTGGGACGCTGGTGGCTGGCGGCATCAGCTTTGGCGCT
GTCTACACCATGCTCCAGGGCTGCCTCAACGAGATGGCTGAGGACGCCCAGCGTGTCCGC
ATCAAGGCCCTGGAGGATGACGAGCCGCAGCCGGAGGTCAGCTTGGAAGTGGCCAGTGAC
AATGGCGTGGAAAAGGGGGGCTCCGGGGAGGGAGGTGGGGAGGAAGCCCCACTCTCAACC
TGCAGGAAGCTCGGCCTCCTTCTTAAGTACATTCTGGACAGCTGGAAGAAACACGACTCA
GAAGAGAAATAA
Protein Properties
Number of Residues 463
Molecular Weight 50287.62
Theoretical pI 5.354
Pfam Domain Function
Signals Not Available
Transmembrane Regions Not Available
Protein Sequence
>Interferon-inducible GTPase 5
MATSKLPVVPGEEENTILMAKERLEALRTAFESGDLPQAASHLQELLASTESIRLEVGVT
GESGAGKSSLINALRGLEAEDPGAALTGVMETTMQPSPYPHPQFPDVTLWDLPGAGSPGC
PADKYLKQVDFSRYDFFLLVSPRRCGAVETRLAAEILCQGKKFYFVRTKVDEDLAATRTQ
RPSGFREAAVLQEIRDHCAERLREAGVADPRIFLVSNLSPARYDFPTLVSTWEHDLPSHR
RHAGLLSLPDISLEALQKKKAMLQEQVLKTALVLGVIQALPVPGLAAAYDDALLIHSLRG
YHRSFGLDDDSLAKLAEQVGKQAGDLRSVIRSPLANEVSPETVLRLYSQSSDGAMRVARA
FERGIPVFGTLVAGGISFGAVYTMLQGCLNEMAEDAQRVRIKALEDDEPQPEVSLEVASD
NGVEKGGSGEGGGEEAPLSTCRKLGLLLKYILDSWKKHDSEEK
GenBank ID Protein 3548787
UniProtKB/Swiss-Prot ID Q6NXR0
UniProtKB/Swiss-Prot Entry Name IIGP5_HUMAN
PDB IDs Not Available
GenBank Gene ID AC005622
GeneCard ID IRGC
GenAtlas ID IRGC
HGNC ID HGNC:28835
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Grimwood J, Gordon LA, Olsen A, Terry A, Schmutz J, Lamerdin J, Hellsten U, Goodstein D, Couronne O, Tran-Gyamfi M, Aerts A, Altherr M, Ashworth L, Bajorek E, Black S, Branscomb E, Caenepeel S, Carrano A, Caoile C, Chan YM, Christensen M, Cleland CA, Copeland A, Dalin E, Dehal P, Denys M, Detter JC, Escobar J, Flowers D, Fotopulos D, Garcia C, Georgescu AM, Glavina T, Gomez M, Gonzales E, Groza M, Hammon N, Hawkins T, Haydu L, Ho I, Huang W, Israni S, Jett J, Kadner K, Kimball H, Kobayashi A, Larionov V, Leem SH, Lopez F, Lou Y, Lowry S, Malfatti S, Martinez D, McCready P, Medina C, Morgan J, Nelson K, Nolan M, Ovcharenko I, Pitluck S, Pollard M, Popkie AP, Predki P, Quan G, Ramirez L, Rash S, Retterer J, Rodriguez A, Rogers S, Salamov A, Salazar A, She X, Smith D, Slezak T, Solovyev V, Thayer N, Tice H, Tsai M, Ustaszewska A, Vo N, Wagner M, Wheeler J, Wu K, Xie G, Yang J, Dubchak I, Furey TS, DeJong P, Dickson M, Gordon D, Eichler EE, Pennacchio LA, Richardson P, Stubbs L, Rokhsar DS, Myers RM, Rubin EM, Lucas SM: The DNA sequence and biology of human chromosome 19. Nature. 2004 Apr 1;428(6982):529-35. [PubMed:15057824 ]