Hmdb loader
Identification
HMDB Protein ID HMDBP08542
Secondary Accession Numbers
  • 14255
Name Rab11 family-interacting protein 5
Synonyms
  1. Gaf-1
  2. Gamma-SNAP-associated factor 1
  3. Phosphoprotein pp75
  4. Rab11-FIP5
  5. Rab11-interacting protein Rip11
Gene Name RAB11FIP5
Protein Type Unknown
Biological Properties
General Function Involved in protein transport
Specific Function Rab effector involved in protein trafficking from apical recycling endosomes to the apical plasma membrane
Pathways Not Available
Reactions Not Available
GO Classification
Component
organelle
membrane-bounded organelle
intracellular membrane-bounded organelle
Process
establishment of localization
transport
protein transport
Cellular Location
  1. Cytoplasm
  2. Peripheral membrane protein
  3. Peripheral membrane protein
  4. Mitochondrion membrane
  5. Recycling endosome membrane
Gene Properties
Chromosome Location Chromosome:2
Locus 2p13
SNPs RAB11FIP5
Gene Sequence
>1962 bp
ATGGCCCTGGTGCGGGGCGCGGAGCCGGCGGCGGGGCCTTCCCGCTGGCTGCCCACGCAC
GTCCAGGTGACGGTGCTGCGGGCCCGCGGGCTGCGGGGCAAGAGCTCGGGAGCGGGCAGC
ACCAGCGACGCGTACACGGTGATCCAGGTGGGCCGCGAGAAGTACAGTACGTCGGTGGTG
GAGAAGACGCACGGCTGCCCCGAGTGGCGTGAGGAGTGCTCCTTCGAGCTGCCGCCGGGG
GCCCTGGATGGCCTGCTGCGGGCGCAGGAGGCCGACGCGGGCCCGGCGCCCTGGGCCGCG
AGCTCCGCCGCCGCCTGCGAGCTGGTGCTCACCACCATGCACCGCTCGCTCATCGGCGTC
GACAAGTTCCTGGGCCAGGCCACGGTGGCGCTGGACGAGGTCTTCGGCGCAGGCCGCGCC
CAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGC
GAGATTGAAGTCACCATCCAGTTCACGCGCAACAACCTGAGCGCCAGTATGTTTGACCTG
TCCATGAAGGACAAGCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAG
AAGAAGTATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCT
GACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTG
CGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCA
GCCAGCGGGAGCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGC
CGTAGCAGCTGGCTGTCCACTGAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTGTTC
ACCCATAAGAGGACCTACAGCGATGAGGCCAACCAGATGCGAGTGGCTCCTCCTCGGGCC
CTTCTGGACCTTCAGGGCCACCTGGATGCTGCCTCCCGCTCTTCGCTCTGTGTCAATGGG
AGCCACATTTACAATGAGGAGCCCCAGGGCCCTGTGCGGCACCGCAGCTCCATCTCGGGC
TCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAGGGGCCT
CGTTCCACAGATGACACCTGGCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGGCAGTG
CTTGGACAGGAGGAGCTGAGTGCTCAGGCTAAAGTCCTGGCCCCTGGGGCCAGCCACCCT
GGAGAGGAGGAGGGGGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCATA
GTGGCCTCCTCTGAGGCTGTGGCAGAGAAGGAGGGAGCCCGGAAGGAGGAACGCAAGCCC
CGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGA
AGCTCTCTGGGGGAAAAGGGGGGTCCCATCCTGGGGGCCTCCCCACATCACTCATCCAGT
GGGGAGGAAAAGGCCAAGAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAG
AAACCCAGTCCCCACCCCGTGAAGCCCCTCAGTGCCGCCCCTGTGGAGGGCAGCCCCGAC
AGGAAGCAGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGCTCAAA
ACAGTCACATCTGGGAGCATTCAGCCTGTGACCCAGGCCCCCCAGGCTGGCCAGATGGTG
GACACCAAAAGGCTGAAGGACTCAGCTGTGCTGGACCAGTCGGCCAAGTACTACCACCTG
ACCCACGATGAGCTCATCAGCCTGCTCCTGCAGCGGGAGCGGGAGCTGAGCCAGCGGGAC
GAGCATGTGCAGGAGCTGGAGAGCTACATCGACCGGCTGCTGGTGCGGATCATGGAGACC
TCACCCACGCTGCTGCAGATCCCCCCGGGCCCCCCCAAATAG
Protein Properties
Number of Residues 653
Molecular Weight 70414.4
Theoretical pI 9.8
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>Rab11 family-interacting protein 5
MALVRGAEPAAGPSRWLPTHVQVTVLRARGLRGKSSGAGSTSDAYTVIQVGREKYSTSVV
EKTHGCPEWREECSFELPPGALDGLLRAQEADAGPAPWAASSAAACELVLTTMHRSLIGV
DKFLGQATVALDEVFGAGRAQHTQWYKLHSKPGKKEKERGEIEVTIQFTRNNLSASMFDL
SMKDKPRSPFSKIRDKMKGKKKYDLESASAILPSSAIEDPDLGSLGKMGKAKGFFLRNKL
RKSSLTQSNTSLGSDSTLSSASGSLAYQGPGAELLTRSPSRSSWLSTEGGRDSAQSPKLF
THKRTYSDEANQMRVAPPRALLDLQGHLDAASRSSLCVNGSHIYNEEPQGPVRHRSSISG
SLPSSGSLQAVSSRFSEEGPRSTDDTWPRGSRSNSSSEAVLGQEELSAQAKVLAPGASHP
GEEEGARLPEGKPVQVATPIVASSEAVAEKEGARKEERKPRMGLFHHHHQGLSRSELGRR
SSLGEKGGPILGASPHHSSSGEEKAKSSWFGLREAKDPTQKPSPHPVKPLSAAPVEGSPD
RKQSRSSLSIALSSGLEKLKTVTSGSIQPVTQAPQAGQMVDTKRLKDSAVLDQSAKYYHL
THDELISLLLQRERELSQRDEHVQELESYIDRLLVRIMETSPTLLQIPPGPPK
GenBank ID Protein 24308075
UniProtKB/Swiss-Prot ID Q9BXF6
UniProtKB/Swiss-Prot Entry Name RFIP5_HUMAN
PDB IDs Not Available
GenBank Gene ID NM_015470.2
GeneCard ID RAB11FIP5
GenAtlas ID RAB11FIP5
HGNC ID HGNC:24845
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP: A quantitative atlas of mitotic phosphorylation. Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10762-7. doi: 10.1073/pnas.0805139105. Epub 2008 Jul 31. [PubMed:18669648 ]
  3. Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, Eng JK, Rodionov V, Han DK: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. Sci Signal. 2009 Aug 18;2(84):ra46. doi: 10.1126/scisignal.2000007. [PubMed:19690332 ]
  4. Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell. 2006 Nov 3;127(3):635-48. [PubMed:17081983 ]
  5. Gauci S, Helbig AO, Slijper M, Krijgsveld J, Heck AJ, Mohammed S: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. Anal Chem. 2009 Jun 1;81(11):4493-501. doi: 10.1021/ac9004309. [PubMed:19413330 ]
  6. Brill LM, Salomon AR, Ficarro SB, Mukherji M, Stettler-Gill M, Peters EC: Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. Anal Chem. 2004 May 15;76(10):2763-72. [PubMed:15144186 ]
  7. Nagase T, Ishikawa K, Suyama M, Kikuno R, Hirosawa M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O: Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 1998 Dec 31;5(6):355-64. [PubMed:10048485 ]
  8. Wallace DM, Lindsay AJ, Hendrick AG, McCaffrey MW: Rab11-FIP4 interacts with Rab11 in a GTP-dependent manner and its overexpression condenses the Rab11 positive compartment in HeLa cells. Biochem Biophys Res Commun. 2002 Dec 20;299(5):770-9. [PubMed:12470645 ]
  9. Prekeris R, Klumperman J, Scheller RH: A Rab11/Rip11 protein complex regulates apical membrane trafficking via recycling endosomes. Mol Cell. 2000 Dec;6(6):1437-48. [PubMed:11163216 ]
  10. Wang D, Buyon JP, Zhu W, Chan EK: Defining a novel 75-kDa phosphoprotein associated with SS-A/Ro and identification of distinct human autoantibodies. J Clin Invest. 1999 Nov;104(9):1265-75. [PubMed:10545525 ]
  11. Chen D, Xu W, He P, Medrano EE, Whiteheart SW: Gaf-1, a gamma -SNAP-binding protein associated with the mitochondria. J Biol Chem. 2001 Apr 20;276(16):13127-35. Epub 2001 Jan 25. [PubMed:11278501 ]