Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:45:55 UTC |
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Update Date | 2022-11-30 19:26:04 UTC |
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HMDB ID | HMDB0115155 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) |
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Description | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)), in particular, consists of one chain of arachidonic acid at the C-1 position and one chain of stearidonic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC InChI=1S/C41H65O8P/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(42)47-37-39(38-48-50(44,45)46)49-41(43)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2/h6,8,11-14,17-19,21-23,26-29,39H,3-5,7,9-10,15-16,20,24-25,30-38H2,1-2H3,(H2,44,45,46)/b8-6-,13-11-,14-12-,19-17-,21-18-,23-22-,28-26-,29-27-/t39-/m1/s1 |
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Synonyms | Value | Source |
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1-arachidonoyl-2-stearidonoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-arachidonoyl-2-stearidonoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:4/18:4) | SMPDB, HMDB | PA(20:4n6/18:4n3) | SMPDB, HMDB | PA(20:4w6/18:4w3) | SMPDB, HMDB | PA(38:8) | SMPDB, HMDB | Phosphatidic acid(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) | SMPDB, HMDB | Phosphatidic acid(20:4/18:4) | SMPDB, HMDB | Phosphatidic acid(20:4n6/18:4n3) | SMPDB, HMDB | Phosphatidic acid(20:4w6/18:4w3) | SMPDB, HMDB | Phosphatidic acid(38:8) | SMPDB, HMDB | Phosphatidate(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) | SMPDB, HMDB | Phosphatidate(20:4/18:4) | SMPDB, HMDB | Phosphatidate(20:4n6/18:4n3) | SMPDB, HMDB | Phosphatidate(20:4w6/18:4w3) | SMPDB, HMDB | Phosphatidate(38:8) | SMPDB, HMDB | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) | SMPDB |
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Chemical Formula | C41H65O8P |
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Average Molecular Weight | 716.937 |
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Monoisotopic Molecular Weight | 716.441706051 |
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IUPAC Name | [(2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-2-[(6Z,9Z,12Z,15Z)-octadeca-6,9,12,15-tetraenoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-2-[(6Z,9Z,12Z,15Z)-octadeca-6,9,12,15-tetraenoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC |
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InChI Identifier | InChI=1S/C41H65O8P/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(42)47-37-39(38-48-50(44,45)46)49-41(43)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2/h6,8,11-14,17-19,21-23,26-29,39H,3-5,7,9-10,15-16,20,24-25,30-38H2,1-2H3,(H2,44,45,46)/b8-6-,13-11-,14-12-,19-17-,21-18-,23-22-,28-26-,29-27-/t39-/m1/s1 |
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InChI Key | RFLXEBPBDSVSDA-JPEVCZJFSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0024925)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/22:2(13Z,16Z)) (PathBank: SMP0024926)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0024927)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0024928)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0024929)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0024930)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0024931)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0024932)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024933)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024934)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC | 5633.6 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC | 4419.4 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC | 5134.3 | Semi standard non polar | 33892256 |
DerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),1TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C | 5173.2 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),1TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C | 4562.5 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),1TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C | 4993.2 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),2TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 5116.1 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),2TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4529.8 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),2TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4409.2 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),1TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5385.7 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),1TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 4690.3 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)),1TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5026.3 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 10V, Positive-QTOF | splash10-0674-1192604300-f88f06a68a08708b029a | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 20V, Positive-QTOF | splash10-052n-2192212000-fd1032a0df3b0e534e47 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 40V, Positive-QTOF | splash10-06r2-1197013000-f4c8c265fb2dd87d14a0 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 10V, Negative-QTOF | splash10-0fbi-4094400300-f3874dd7a477679b8b8e | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 20V, Negative-QTOF | splash10-004i-9032000000-6fc7f6b81b9ca21f8c97 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 40V, Negative-QTOF | splash10-004i-9000000000-0835ff2e749b8791d3ac | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 10V, Positive-QTOF | splash10-00kb-0000009500-8e305592ff99e63ed645 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 20V, Positive-QTOF | splash10-014i-0000007900-397959807ad87acbcac9 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 40V, Positive-QTOF | splash10-02tc-0000907100-656e1c8958ad1bc3a8dd | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 10V, Positive-QTOF | splash10-000i-0000000900-22f648ca106818f18ab4 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 20V, Positive-QTOF | splash10-000o-0000009900-3fd62b528331a36cf7d6 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 40V, Positive-QTOF | splash10-000i-0000902300-95c9597dd220d8535097 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 10V, Negative-QTOF | splash10-014i-0000000900-a17617836514233694c7 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 20V, Negative-QTOF | splash10-0hki-0033900400-daa8124f385577257c32 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) 40V, Negative-QTOF | splash10-0ufr-1169600100-25f609a3d0e921a26e8c | 2021-09-22 | Wishart Lab | View Spectrum |
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Pathways | |
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