Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2006-08-13 11:13:59 UTC |
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Update Date | 2023-02-21 17:16:56 UTC |
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HMDB ID | HMDB0004113 |
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Secondary Accession Numbers | - HMDB0031466
- HMDB04113
- HMDB31466
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Metabolite Identification |
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Common Name | Se-Methylselenocysteine |
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Description | Se-Methylselenocysteine (SeMSC) is a naturally occurring seleno-amino acid that is synthesized by plants such as garlic, astragalus, onions, and broccoli. It cannot be synthesized by higher animals. Unlike selenomethionine, which is incorporated into proteins in place of methionine, SeMSC is not incorporated into any proteins, thereby being fully available for the synthesis of selenium-containing enzymes such as glutathione peroxidase. Selenomethionine is the major seleno-compound in cereal grains (wheat grain, maize, and rice), soybeans, and enriched yeast. Seleno-compounds present in plants may have a profound effect upon the health of animals and human subjects. It is now known that the total Se content cannot be used as an indication of its efficacy, but knowledge of individual selenocompounds is necessary to fully assess the significance. Thus, speciation of the seleno-compounds has moved to the forefront. Since animals and man are dependent upon plants for their nutritional requirements, this makes the types of seleno-compounds in plants even more critical. Se enters the food chain through incorporation into plant proteins, mostly as selenocysteine and selenomethionine at normal Se levels. There are two possible pathways for the catabolism of selenomethionine: (1) a transsulfuration pathway via selenocystathionine to produce selenocysteine, which in turn is degraded to H2Se by the enzyme beta-lyase and (2) a transamination-decarboxylation pathway. It was estimated that 90% of methionine is metabolized through this pathway and thus could be also the major route for selenomethionine catabolism (PMID: 14748935 , Br J Nutr. 2004 Jan;91(1):11-28.). Selenomethionine is an amino acid containing selenium. The L-isomer of selenomethionine, known as Se-met and Sem, is a common natural food source of selenium. In vivo, selenomethionine is randomly incorporated instead of methionine and is readily oxidized. Its antioxidant activity arises from its ability to deplete reactive species. Selenium and sulfur are chalcogen elements that share many chemical properties and the substitution of methionine to selenomethionine may have no effect on protein structure and function. However, the incorporation of selenomethionine into tissue proteins and keratin in horses causes alkali disease. Alkali disease is characterized by emaciation, loss of hair, deformation and shedding of hooves, loss of vitality, and erosion of the joints of long bones. |
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Structure | InChI=1S/C4H9NO2Se/c1-8-2-3(5)4(6)7/h3H,2,5H2,1H3,(H,6,7)/t3-/m0/s1 |
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Synonyms | Value | Source |
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L-Methylselenocysteine | ChEBI | Methyl-L-selenocysteine | ChEBI | Methylselenocysteine | ChEBI | Se-methyl-seleno-L-cysteine | ChEBI | Se-methyl-selenocysteine | ChEBI | Selenium methyl cysteine | ChEBI | Selenium-methylselenocystine | ChEBI | Selenohomocysteine | ChEBI | Selenomethylselenocysteine | ChEBI | 3-(Methylseleno)-L-alanine | HMDB | Se-methyl-L-selenocysteine | HMDB | L-Methyl-selenocysteine | HMDB | Methyl selenocysteine | HMDB | Selenomethylselenocysteine, (D,L)-isomer | HMDB | Selenomethylselenocysteine, (L)-isomer, 75Se-labeled | HMDB | SeMCys | HMDB | Selenomethylselenocysteine, (L)-isomer | HMDB | Methylseleno-L-cysteine | HMDB | Selenomethyl selenocysteine | HMDB | Se-Methylselenocysteine | HMDB |
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Chemical Formula | C4H9NO2Se |
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Average Molecular Weight | 182.08 |
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Monoisotopic Molecular Weight | 182.979850365 |
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IUPAC Name | (2R)-2-amino-3-(methylselanyl)propanoic acid |
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Traditional Name | methylselenocysteine |
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CAS Registry Number | 26046-90-2 |
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SMILES | C[Se]C[C@H](N)C(O)=O |
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InChI Identifier | InChI=1S/C4H9NO2Se/c1-8-2-3(5)4(6)7/h3H,2,5H2,1H3,(H,6,7)/t3-/m0/s1 |
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InChI Key | XDSSPSLGNGIIHP-VKHMYHEASA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as l-alpha-amino acids. These are alpha amino acids which have the L-configuration of the alpha-carbon atom. |
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Kingdom | Organic compounds |
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Super Class | Organic acids and derivatives |
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Class | Carboxylic acids and derivatives |
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Sub Class | Amino acids, peptides, and analogues |
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Direct Parent | L-alpha-amino acids |
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Alternative Parents | |
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Substituents | - L-alpha-amino acid
- Amino acid
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Selenoether
- Amine
- Hydrocarbon derivative
- Organic oxide
- Organopnictogen compound
- Primary amine
- Organoselenium compound
- Organooxygen compound
- Organonitrogen compound
- Organic oxygen compound
- Primary aliphatic amine
- Organic nitrogen compound
- Carbonyl group
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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Se-Methylselenocysteine,1TMS,isomer #1 | C[Se]C[C@H](N)C(=O)O[Si](C)(C)C | 1361.9 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,1TMS,isomer #2 | C[Se]C[C@H](N[Si](C)(C)C)C(=O)O | 1443.5 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,2TMS,isomer #1 | C[Se]C[C@H](N[Si](C)(C)C)C(=O)O[Si](C)(C)C | 1464.3 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,2TMS,isomer #1 | C[Se]C[C@H](N[Si](C)(C)C)C(=O)O[Si](C)(C)C | 1325.7 | Standard non polar | 33892256 | Se-Methylselenocysteine,2TMS,isomer #1 | C[Se]C[C@H](N[Si](C)(C)C)C(=O)O[Si](C)(C)C | 1431.9 | Standard polar | 33892256 | Se-Methylselenocysteine,2TMS,isomer #2 | C[Se]C[C@@H](C(=O)O)N([Si](C)(C)C)[Si](C)(C)C | 1574.5 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,2TMS,isomer #2 | C[Se]C[C@@H](C(=O)O)N([Si](C)(C)C)[Si](C)(C)C | 1378.0 | Standard non polar | 33892256 | Se-Methylselenocysteine,2TMS,isomer #2 | C[Se]C[C@@H](C(=O)O)N([Si](C)(C)C)[Si](C)(C)C | 1582.8 | Standard polar | 33892256 | Se-Methylselenocysteine,3TMS,isomer #1 | C[Se]C[C@@H](C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C | 1587.2 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,3TMS,isomer #1 | C[Se]C[C@@H](C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C | 1451.5 | Standard non polar | 33892256 | Se-Methylselenocysteine,3TMS,isomer #1 | C[Se]C[C@@H](C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C | 1399.2 | Standard polar | 33892256 | Se-Methylselenocysteine,1TBDMS,isomer #1 | C[Se]C[C@H](N)C(=O)O[Si](C)(C)C(C)(C)C | 1623.1 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,1TBDMS,isomer #2 | C[Se]C[C@H](N[Si](C)(C)C(C)(C)C)C(=O)O | 1689.4 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,2TBDMS,isomer #1 | C[Se]C[C@H](N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C | 1938.9 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,2TBDMS,isomer #1 | C[Se]C[C@H](N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C | 1733.3 | Standard non polar | 33892256 | Se-Methylselenocysteine,2TBDMS,isomer #1 | C[Se]C[C@H](N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C | 1709.9 | Standard polar | 33892256 | Se-Methylselenocysteine,2TBDMS,isomer #2 | C[Se]C[C@@H](C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2039.0 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,2TBDMS,isomer #2 | C[Se]C[C@@H](C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 1796.6 | Standard non polar | 33892256 | Se-Methylselenocysteine,2TBDMS,isomer #2 | C[Se]C[C@@H](C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 1778.9 | Standard polar | 33892256 | Se-Methylselenocysteine,3TBDMS,isomer #1 | C[Se]C[C@@H](C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2291.5 | Semi standard non polar | 33892256 | Se-Methylselenocysteine,3TBDMS,isomer #1 | C[Se]C[C@@H](C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2064.3 | Standard non polar | 33892256 | Se-Methylselenocysteine,3TBDMS,isomer #1 | C[Se]C[C@@H](C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 1821.2 | Standard polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Experimental GC-MS | GC-MS Spectrum - Se-Methylselenocysteine GC-MS (1 TMS) | splash10-000i-2900000000-584579d62a5c494d1ad4 | 2014-06-16 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - Se-Methylselenocysteine GC-MS (2 TMS) | splash10-0i00-1960000000-c1d9d3d6c03ef447c682 | 2014-06-16 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - Se-Methylselenocysteine GC-MS (Non-derivatized) | splash10-000i-2900000000-584579d62a5c494d1ad4 | 2017-09-12 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - Se-Methylselenocysteine GC-MS (Non-derivatized) | splash10-0i00-1960000000-c1d9d3d6c03ef447c682 | 2017-09-12 | HMDB team, MONA, MassBank | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Se-Methylselenocysteine GC-MS (Non-derivatized) - 70eV, Positive | splash10-0006-9400000000-b52de18849d5860694de | 2016-09-22 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Se-Methylselenocysteine GC-MS (1 TMS) - 70eV, Positive | splash10-00dl-9110000000-370afb49a49bc4836d3e | 2017-10-06 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Se-Methylselenocysteine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 10V, Positive-QTOF | splash10-001r-0900000000-87ae6338ccd9513f5db0 | 2015-09-15 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 20V, Positive-QTOF | splash10-001r-1900000000-204e0c71178a372a67d0 | 2015-09-15 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 40V, Positive-QTOF | splash10-000f-9800000000-f08ef5fe840b11c1330b | 2015-09-15 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 10V, Negative-QTOF | splash10-00lu-5900000000-267cb39ae0470e212ce2 | 2015-09-15 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 20V, Negative-QTOF | splash10-0079-9400000000-7ae0b50471ba90d5656c | 2015-09-15 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 40V, Negative-QTOF | splash10-0006-9300000000-7580c3589d69535a4bb7 | 2015-09-15 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 10V, Negative-QTOF | splash10-0006-9000000000-f9689d19a8a4fb34dc2c | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 20V, Negative-QTOF | splash10-0006-9000000000-f9689d19a8a4fb34dc2c | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 40V, Negative-QTOF | splash10-0006-9000000000-f9689d19a8a4fb34dc2c | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 10V, Positive-QTOF | splash10-00lr-0900000000-d519041b7fbf3920f7ee | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 20V, Positive-QTOF | splash10-00y0-0900000000-88e1671d699eb2ba3233 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Se-Methylselenocysteine 40V, Positive-QTOF | splash10-00dl-5900000000-c1dd9e6e9d3616306ddc | 2021-09-24 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum |
IR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-) | 2023-02-03 | FELIX lab | View Spectrum | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-03 | FELIX lab | View Spectrum | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-03 | FELIX lab | View Spectrum |
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