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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 17:32:43 UTC

Update Date

2022-03-07 02:52:17 UTC

HMDB ID

HMDB0029800

Secondary Accession Numbers

HMDB29800

Metabolite Identification

Common Name

Mangiferic acid

Description

Mangiferic acid, also known as mangiferate, belongs to the class of organic compounds known as lineolic acids and derivatives. These are derivatives of lineolic acid. Lineolic acid is a polyunsaturated omega-6 18 carbon long fatty acid, with two CC double bonds at the 9- and 12-positions. Based on a literature review a significant number of articles have been published on Mangiferic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0029800
     RDKit          3D
Mangiferic acid
 52 51  0  0  0  0  0  0  0  0999 V2000
    6.9211   -1.5020    1.9400 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2027   -0.0992    1.4988 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9426    0.6831    1.3433 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6205    1.2079    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3607    1.9871    0.0198 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4758    1.3051   -1.0309 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1466   -0.0953   -0.6068 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2801   -0.7345   -1.6585 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0190    0.0224   -1.8323 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340   -0.5879   -1.6102 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4108    0.1222   -1.7694 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1124    0.0834   -0.4147 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4598    0.8161   -0.5157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1634    0.7809    0.8261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4785   -0.5601    1.3355 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3755   -1.4738    0.6386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7990   -1.1676    0.4500 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2591   -0.0477   -0.3096 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6037    0.7462   -0.9682 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6619    0.1877   -0.3095 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8693   -2.0894    1.8885 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4393   -1.5523    2.9261 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2351   -1.9687    1.1844 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7971    0.4312    2.2806 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7834   -0.1298    0.5621 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2698    0.8403    2.1728 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2835    1.0603   -0.6785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6213    2.9920   -0.3922 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8158    2.0612    0.9738 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6036    1.9357   -1.2728 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    1.2158   -1.9827 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1028   -0.6416   -0.5064 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6042   -0.1545    0.3541 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0394   -1.7738   -1.4196 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8354   -0.6386   -2.6254 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9924    1.0795   -2.1429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1777   -1.6322   -1.3033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2146    1.1684   -2.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0706   -0.4093   -2.4828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2307   -0.9621   -0.1124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4344    0.5781    0.3023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9864    0.3138   -1.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2316    1.8642   -0.7549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9402    1.5619    0.9263 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3506    1.1828    1.5412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4898   -1.0972    1.4779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8477   -0.4418    2.3922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3493   -2.4563    1.2297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9808   -1.8211   -0.3614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2432   -2.1012   -0.0626 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3364   -1.2317    1.4655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9846    1.1424   -0.1619 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  0
  2 25  1  0
  3 26  1  0
  4 27  1  0
  5 28  1  0
  5 29  1  0
  6 30  1  0
  6 31  1  0
  7 32  1  0
  7 33  1  0
  8 34  1  0
  8 35  1  0
  9 36  1  0
 10 37  1  0
 11 38  1  0
 11 39  1  0
 12 40  1  0
 12 41  1  0
 13 42  1  0
 13 43  1  0
 14 44  1  0
 14 45  1  0
 15 46  1  0
 15 47  1  0
 16 48  1  0
 16 49  1  0
 17 50  1  0
 17 51  1  0
 20 52  1  0
M  END


  Mrv0541 02241216132D          

 20 19  0  0  0  0            999 V2000
   -6.4348   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7204   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0042   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2897   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5753   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8593   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1449   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4304   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7142   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0001   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7143   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4305   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1448   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8593   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5754   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2898   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0041   -0.6187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7203   -0.2062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4348   -0.6187    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7203    0.6187    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0029800

> <DATABASE_NAME>
hmdb

> <SMILES>
CC\C=C\CCCC\C=C\CCCCCCCC(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C18H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h3-4,9-10H,2,5-8,11-17H2,1H3,(H,19,20)/b4-3+,10-9+

> <INCHI_KEY>
AWGFYZFANDHELM-SCPMJEMWSA-N

> <FORMULA>
C18H32O2

> <MOLECULAR_WEIGHT>
280.4455

> <EXACT_MASS>
280.240230268

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
36.723935860538006

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(9E,15E)-octadeca-9,15-dienoic acid

> <ALOGPS_LOGP>
7.04

> <JCHEM_LOGP>
6.421876794333333

> <ALOGPS_LOGS>
-6.26

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.988167283903808

> <JCHEM_POLAR_SURFACE_AREA>
37.3

> <JCHEM_REFRACTIVITY>
88.51879999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
14

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.55e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(9E,15E)-octadeca-9,15-dienoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0029800
     RDKit          3D
Mangiferic acid
 52 51  0  0  0  0  0  0  0  0999 V2000
    6.9211   -1.5020    1.9400 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2027   -0.0992    1.4988 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9426    0.6831    1.3433 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6205    1.2079    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3607    1.9871    0.0198 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4758    1.3051   -1.0309 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1466   -0.0953   -0.6068 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2801   -0.7345   -1.6585 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0190    0.0224   -1.8323 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340   -0.5879   -1.6102 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4108    0.1222   -1.7694 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1124    0.0834   -0.4147 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4598    0.8161   -0.5157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1634    0.7809    0.8261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4785   -0.5601    1.3355 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3755   -1.4738    0.6386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7990   -1.1676    0.4500 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2591   -0.0477   -0.3096 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6037    0.7462   -0.9682 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6619    0.1877   -0.3095 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8693   -2.0894    1.8885 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4393   -1.5523    2.9261 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2351   -1.9687    1.1844 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7971    0.4312    2.2806 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7834   -0.1298    0.5621 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2698    0.8403    2.1728 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2835    1.0603   -0.6785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6213    2.9920   -0.3922 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8158    2.0612    0.9738 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6036    1.9357   -1.2728 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    1.2158   -1.9827 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1028   -0.6416   -0.5064 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6042   -0.1545    0.3541 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0394   -1.7738   -1.4196 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8354   -0.6386   -2.6254 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9924    1.0795   -2.1429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1777   -1.6322   -1.3033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2146    1.1684   -2.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0706   -0.4093   -2.4828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2307   -0.9621   -0.1124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4344    0.5781    0.3023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9864    0.3138   -1.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2316    1.8642   -0.7549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9402    1.5619    0.9263 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3506    1.1828    1.5412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4898   -1.0972    1.4779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8477   -0.4418    2.3922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3493   -2.4563    1.2297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9808   -1.8211   -0.3614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2432   -2.1012   -0.0626 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3364   -1.2317    1.4655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9846    1.1424   -0.1619 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  0
  2 25  1  0
  3 26  1  0
  4 27  1  0
  5 28  1  0
  5 29  1  0
  6 30  1  0
  6 31  1  0
  7 32  1  0
  7 33  1  0
  8 34  1  0
  8 35  1  0
  9 36  1  0
 10 37  1  0
 11 38  1  0
 11 39  1  0
 12 40  1  0
 12 41  1  0
 13 42  1  0
 13 43  1  0
 14 44  1  0
 14 45  1  0
 15 46  1  0
 15 47  1  0
 16 48  1  0
 16 49  1  0
 17 50  1  0
 17 51  1  0
 20 52  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0     -12.012  -1.155   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0     -10.678  -0.385   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -9.341  -1.155   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -8.007  -0.385   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -6.674  -1.155   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -5.337  -0.385   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -4.004  -1.155   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -2.670  -0.385   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.333  -1.155   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000  -0.385   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.333  -1.155   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.670  -0.385   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.004  -1.155   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.337  -0.385   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.674  -1.155   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.008  -0.385   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.341  -1.155   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      10.678  -0.385   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      12.012  -1.155   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0      10.678   1.155   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18                                                            
MASTER        0    0    0    0    0    0    0    0   20    0   38    0
END

COMPND    HMDB0029800
HETATM    1  C1  UNL     1       6.921  -1.502   1.940  1.00  0.00           C  
HETATM    2  C2  UNL     1       7.203  -0.099   1.499  1.00  0.00           C  
HETATM    3  C3  UNL     1       5.943   0.683   1.343  1.00  0.00           C  
HETATM    4  C4  UNL     1       5.621   1.208   0.165  1.00  0.00           C  
HETATM    5  C5  UNL     1       4.361   1.987   0.020  1.00  0.00           C  
HETATM    6  C6  UNL     1       3.476   1.305  -1.031  1.00  0.00           C  
HETATM    7  C7  UNL     1       3.147  -0.095  -0.607  1.00  0.00           C  
HETATM    8  C8  UNL     1       2.280  -0.735  -1.658  1.00  0.00           C  
HETATM    9  C9  UNL     1       1.019   0.022  -1.832  1.00  0.00           C  
HETATM   10  C10 UNL     1      -0.134  -0.588  -1.610  1.00  0.00           C  
HETATM   11  C11 UNL     1      -1.411   0.122  -1.769  1.00  0.00           C  
HETATM   12  C12 UNL     1      -2.112   0.083  -0.415  1.00  0.00           C  
HETATM   13  C13 UNL     1      -3.460   0.816  -0.516  1.00  0.00           C  
HETATM   14  C14 UNL     1      -4.163   0.781   0.826  1.00  0.00           C  
HETATM   15  C15 UNL     1      -4.478  -0.560   1.335  1.00  0.00           C  
HETATM   16  C16 UNL     1      -5.376  -1.474   0.639  1.00  0.00           C  
HETATM   17  C17 UNL     1      -6.799  -1.168   0.450  1.00  0.00           C  
HETATM   18  C18 UNL     1      -7.259  -0.048  -0.310  1.00  0.00           C  
HETATM   19  O1  UNL     1      -6.604   0.746  -0.968  1.00  0.00           O  
HETATM   20  O2  UNL     1      -8.662   0.188  -0.310  1.00  0.00           O  
HETATM   21  H1  UNL     1       7.869  -2.089   1.888  1.00  0.00           H  
HETATM   22  H2  UNL     1       6.439  -1.552   2.926  1.00  0.00           H  
HETATM   23  H3  UNL     1       6.235  -1.969   1.184  1.00  0.00           H  
HETATM   24  H4  UNL     1       7.797   0.431   2.281  1.00  0.00           H  
HETATM   25  H5  UNL     1       7.783  -0.130   0.562  1.00  0.00           H  
HETATM   26  H6  UNL     1       5.270   0.840   2.173  1.00  0.00           H  
HETATM   27  H7  UNL     1       6.283   1.060  -0.679  1.00  0.00           H  
HETATM   28  H8  UNL     1       4.621   2.992  -0.392  1.00  0.00           H  
HETATM   29  H9  UNL     1       3.816   2.061   0.974  1.00  0.00           H  
HETATM   30  H10 UNL     1       2.604   1.936  -1.273  1.00  0.00           H  
HETATM   31  H11 UNL     1       4.065   1.216  -1.983  1.00  0.00           H  
HETATM   32  H12 UNL     1       4.103  -0.642  -0.506  1.00  0.00           H  
HETATM   33  H13 UNL     1       2.604  -0.155   0.354  1.00  0.00           H  
HETATM   34  H14 UNL     1       2.039  -1.774  -1.420  1.00  0.00           H  
HETATM   35  H15 UNL     1       2.835  -0.639  -2.625  1.00  0.00           H  
HETATM   36  H16 UNL     1       0.992   1.079  -2.143  1.00  0.00           H  
HETATM   37  H17 UNL     1      -0.178  -1.632  -1.303  1.00  0.00           H  
HETATM   38  H18 UNL     1      -1.215   1.168  -2.058  1.00  0.00           H  
HETATM   39  H19 UNL     1      -2.071  -0.409  -2.483  1.00  0.00           H  
HETATM   40  H20 UNL     1      -2.231  -0.962  -0.112  1.00  0.00           H  
HETATM   41  H21 UNL     1      -1.434   0.578   0.302  1.00  0.00           H  
HETATM   42  H22 UNL     1      -3.986   0.314  -1.328  1.00  0.00           H  
HETATM   43  H23 UNL     1      -3.232   1.864  -0.755  1.00  0.00           H  
HETATM   44  H24 UNL     1      -4.940   1.562   0.926  1.00  0.00           H  
HETATM   45  H25 UNL     1      -3.351   1.183   1.541  1.00  0.00           H  
HETATM   46  H26 UNL     1      -3.490  -1.097   1.478  1.00  0.00           H  
HETATM   47  H27 UNL     1      -4.848  -0.442   2.392  1.00  0.00           H  
HETATM   48  H28 UNL     1      -5.349  -2.456   1.230  1.00  0.00           H  
HETATM   49  H29 UNL     1      -4.981  -1.821  -0.361  1.00  0.00           H  
HETATM   50  H30 UNL     1      -7.243  -2.101  -0.063  1.00  0.00           H  
HETATM   51  H31 UNL     1      -7.336  -1.232   1.465  1.00  0.00           H  
HETATM   52  H32 UNL     1      -8.985   1.142  -0.162  1.00  0.00           H  
CONECT    1    2   21   22   23
CONECT    2    3   24   25
CONECT    3    4    4   26
CONECT    4    5   27
CONECT    5    6   28   29
CONECT    6    7   30   31
CONECT    7    8   32   33
CONECT    8    9   34   35
CONECT    9   10   10   36
CONECT   10   11   37
CONECT   11   12   38   39
CONECT   12   13   40   41
CONECT   13   14   42   43
CONECT   14   15   44   45
CONECT   15   16   46   47
CONECT   16   17   48   49
CONECT   17   18   50   51
CONECT   18   19   19   20
CONECT   20   52
END

HMDB0029800
     RDKit          3D
Mangiferic acid
 52 51  0  0  0  0  0  0  0  0999 V2000
    6.9211   -1.5020    1.9400 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2027   -0.0992    1.4988 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9426    0.6831    1.3433 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6205    1.2079    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3607    1.9871    0.0198 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4758    1.3051   -1.0309 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1466   -0.0953   -0.6068 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2801   -0.7345   -1.6585 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0190    0.0224   -1.8323 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340   -0.5879   -1.6102 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4108    0.1222   -1.7694 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1124    0.0834   -0.4147 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4598    0.8161   -0.5157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1634    0.7809    0.8261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4785   -0.5601    1.3355 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3755   -1.4738    0.6386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7990   -1.1676    0.4500 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2591   -0.0477   -0.3096 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6037    0.7462   -0.9682 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6619    0.1877   -0.3095 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8693   -2.0894    1.8885 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4393   -1.5523    2.9261 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2351   -1.9687    1.1844 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7971    0.4312    2.2806 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7834   -0.1298    0.5621 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2698    0.8403    2.1728 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2835    1.0603   -0.6785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6213    2.9920   -0.3922 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8158    2.0612    0.9738 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6036    1.9357   -1.2728 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    1.2158   -1.9827 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1028   -0.6416   -0.5064 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6042   -0.1545    0.3541 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0394   -1.7738   -1.4196 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8354   -0.6386   -2.6254 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9924    1.0795   -2.1429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1777   -1.6322   -1.3033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2146    1.1684   -2.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0706   -0.4093   -2.4828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2307   -0.9621   -0.1124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4344    0.5781    0.3023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9864    0.3138   -1.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2316    1.8642   -0.7549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9402    1.5619    0.9263 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3506    1.1828    1.5412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4898   -1.0972    1.4779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8477   -0.4418    2.3922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3493   -2.4563    1.2297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9808   -1.8211   -0.3614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2432   -2.1012   -0.0626 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3364   -1.2317    1.4655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9846    1.1424   -0.1619 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  0
  2 25  1  0
  3 26  1  0
  4 27  1  0
  5 28  1  0
  5 29  1  0
  6 30  1  0
  6 31  1  0
  7 32  1  0
  7 33  1  0
  8 34  1  0
  8 35  1  0
  9 36  1  0
 10 37  1  0
 11 38  1  0
 11 39  1  0
 12 40  1  0
 12 41  1  0
 13 42  1  0
 13 43  1  0
 14 44  1  0
 14 45  1  0
 15 46  1  0
 15 47  1  0
 16 48  1  0
 16 49  1  0
 17 50  1  0
 17 51  1  0
 20 52  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
Mangiferate	Generator
9,15-Octadecadienoic acid	HMDB, MeSH
cis-9,cis-15-Octadecadienoic acid	HMDB, MeSH
(9E,15E)-Octadeca-9,15-dienoate	Generator
Mangiferic acid	MeSH

Chemical Formula

C₁₈H₃₂O₂

Average Molecular Weight

280.4455

Monoisotopic Molecular Weight

280.240230268

IUPAC Name

(9E,15E)-octadeca-9,15-dienoic acid

Traditional Name

(9E,15E)-octadeca-9,15-dienoic acid

CAS Registry Number

18402-92-1

SMILES

CC\C=C\CCCC\C=C\CCCCCCCC(O)=O

InChI Identifier

InChI=1S/C18H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h3-4,9-10H,2,5-8,11-17H2,1H3,(H,19,20)/b4-3+,10-9+

InChI Key

AWGFYZFANDHELM-SCPMJEMWSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as lineolic acids and derivatives. These are derivatives of lineolic acid. Lineolic acid is a polyunsaturated omega-6 18 carbon long fatty acid, with two CC double bonds at the 9- and 12-positions.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Lineolic acids and derivatives

Direct Parent

Lineolic acids and derivatives

Alternative Parents

Substituents

Octadecanoid
Long-chain fatty acid
Fatty acid
Unsaturated fatty acid
Straight chain fatty acid
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Excreta

Biofluid or Excreta

Urine (HMDB: HMDB0029800)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0029800)

Source

Endogenous

Endogenous (HMDB: HMDB0029800)

Plant

Plant (HMDB: HMDB0029800)

Animal

Animal (HMDB: HMDB0029800)

Exogenous

Food

Food (HMDB: HMDB0029800)

Fruit

Tropical fruit

Mango (FooDB: FOOD00106)

Fruits (FooDB: FOOD00871)

Milk and milk product

Unfermented milk

Milk (Cow) (FooDB: FOOD00618)

Exogenous (HMDB: HMDB0029800)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0029800)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0029800)

Lipid metabolism pathway (HMDB: HMDB0029800)

Cellular process

Cell signaling (HMDB: HMDB0029800)

Biochemical process

Lipid transport (HMDB: HMDB0029800)

Role

Biological role

Energy source (HMDB: HMDB0029800)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0029800)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	0.015 mg/L @ 25 °C (est)	The Good Scents Company Information System
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.00016 g/L	ALOGPS
logP	7.04	ALOGPS
logP	6.42	ChemAxon
logS	-6.3	ALOGPS
pKa (Strongest Acidic)	4.99	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	37.3 Å²	ChemAxon
Rotatable Bond Count	14	ChemAxon
Refractivity	88.52 m³·mol⁻¹	ChemAxon
Polarizability	36.72 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	177.111	31661259
DarkChem	[M-H]-	176.462	31661259
DeepCCS	[M+H]+	171.469	30932474
DeepCCS	[M-H]-	168.544	30932474
DeepCCS	[M-2H]-	204.297	30932474
DeepCCS	[M+Na]+	180.178	30932474
AllCCS	[M+H]+	177.4	32859911
AllCCS	[M+H-H2O]+	174.3	32859911
AllCCS	[M+NH4]+	180.2	32859911
AllCCS	[M+Na]+	181.0	32859911
AllCCS	[M-H]-	178.5	32859911
AllCCS	[M+Na-2H]-	180.1	32859911
AllCCS	[M+HCOO]-	182.0	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.	9.82 minutes	32390414
Predicted by Siyang on May 30, 2022	23.4283 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.74 minutes	32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid	35.2 seconds	40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	3055.6 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	596.2 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	241.0 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	373.4 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	625.3 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	1035.4 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	728.9 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	92.1 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	2199.0 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	676.1 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1777.4 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	803.3 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	499.0 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	549.9 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	588.9 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	8.3 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Mangiferic acid	CC\C=C\CCCC\C=C\CCCCCCCC(O)=O	3187.4	Standard polar	33892256
Mangiferic acid	CC\C=C\CCCC\C=C\CCCCCCCC(O)=O	2099.8	Standard non polar	33892256
Mangiferic acid	CC\C=C\CCCC\C=C\CCCCCCCC(O)=O	2163.9	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Mangiferic acid,1TMS,isomer #1	CC/C=C/CCCC/C=C/CCCCCCCC(=O)O[Si](C)(C)C	2219.4	Semi standard non polar	33892256
Mangiferic acid,1TBDMS,isomer #1	CC/C=C/CCCC/C=C/CCCCCCCC(=O)O[Si](C)(C)C(C)(C)C	2458.2	Semi standard non polar	33892256

Spectra

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB001008

KNApSAcK ID

C00052789

Chemspider ID

4943463

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

6439027

PDB ID

Not Available

ChEBI ID

170098

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1811411

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Mangiferic acid (HMDB0029800)

MOL for HMDB0029800 (Mangiferic acid)

3D MOL for HMDB0029800 (Mangiferic acid)

3D SDF for HMDB0029800 (Mangiferic acid)

3D-SDF for HMDB0029800 (Mangiferic acid)

PDB for HMDB0029800 (Mangiferic acid)

3D PDB for HMDB0029800 (Mangiferic acid)

SMILES for HMDB0029800 (Mangiferic acid)

INCHI for HMDB0029800 (Mangiferic acid)

Structure for HMDB0029800 (Mangiferic acid)

3D Structure for HMDB0029800 (Mangiferic acid)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized