Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:33:41 UTC
Update Date2023-02-21 17:19:22 UTC
HMDB IDHMDB0029939
Secondary Accession Numbers
  • HMDB29939
Metabolite Identification
Common Name6-Amino-9H-purine-9-propanoic acid
Description6-Amino-9H-purine-9-propanoic acid, also known as 9-(2-carboxyethyl)adenine or 3-(9-adeninyl)propionic acid, belongs to the class of organic compounds known as 6-aminopurines. These are purines that carry an amino group at position 6. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring. Based on a literature review a significant number of articles have been published on 6-Amino-9H-purine-9-propanoic acid.
Structure
Data?1676999962
Synonyms
ValueSource
6-Amino-9H-purine-9-propanoateGenerator
9-(2-Carboxyethyl)adenineHMDB
3-(9-Adeninyl)propionic acidHMDB
3-(6-Amino-9H-purin-9-yl)propanoateHMDB
Chemical FormulaC8H9N5O2
Average Molecular Weight207.1894
Monoisotopic Molecular Weight207.075624557
IUPAC Name3-(6-amino-9H-purin-9-yl)propanoic acid
Traditional Name3-(6-aminopurin-9-yl)propanoic acid
CAS Registry Number4244-47-7
SMILES
NC1=NC=NC2=C1N=CN2CCC(O)=O
InChI Identifier
InChI=1S/C8H9N5O2/c9-7-6-8(11-3-10-7)13(4-12-6)2-1-5(14)15/h3-4H,1-2H2,(H,14,15)(H2,9,10,11)
InChI KeyQXAYJKFBMWMARF-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 6-aminopurines. These are purines that carry an amino group at position 6. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassImidazopyrimidines
Sub ClassPurines and purine derivatives
Direct Parent6-aminopurines
Alternative Parents
Substituents
  • 6-aminopurine
  • Aminopyrimidine
  • Imidolactam
  • Pyrimidine
  • N-substituted imidazole
  • Azole
  • Heteroaromatic compound
  • Imidazole
  • Amino acid or derivatives
  • Amino acid
  • Carboxylic acid derivative
  • Azacycle
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Primary amine
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point277 - 278 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility5.56 g/LALOGPS
logP-1.3ALOGPS
logP-2ChemAxon
logS-1.6ALOGPS
pKa (Strongest Acidic)3.81ChemAxon
pKa (Strongest Basic)5.16ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area106.92 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity52.28 m³·mol⁻¹ChemAxon
Polarizability19.55 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+146.83931661259
DarkChem[M-H]-143.16931661259
DeepCCS[M+H]+138.9730932474
DeepCCS[M-H]-135.96530932474
DeepCCS[M-2H]-172.74130932474
DeepCCS[M+Na]+148.27930932474
AllCCS[M+H]+145.832859911
AllCCS[M+H-H2O]+141.832859911
AllCCS[M+NH4]+149.432859911
AllCCS[M+Na]+150.532859911
AllCCS[M-H]-144.332859911
AllCCS[M+Na-2H]-144.532859911
AllCCS[M+HCOO]-144.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
6-Amino-9H-purine-9-propanoic acidNC1=NC=NC2=C1N=CN2CCC(O)=O2879.9Standard polar33892256
6-Amino-9H-purine-9-propanoic acidNC1=NC=NC2=C1N=CN2CCC(O)=O1843.4Standard non polar33892256
6-Amino-9H-purine-9-propanoic acidNC1=NC=NC2=C1N=CN2CCC(O)=O2156.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
6-Amino-9H-purine-9-propanoic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)CCN1C=NC2=C(N)N=CN=C212232.4Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,1TMS,isomer #2C[Si](C)(C)NC1=NC=NC2=C1N=CN2CCC(=O)O2296.7Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TMS,isomer #1C[Si](C)(C)NC1=NC=NC2=C1N=CN2CCC(=O)O[Si](C)(C)C2285.0Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TMS,isomer #1C[Si](C)(C)NC1=NC=NC2=C1N=CN2CCC(=O)O[Si](C)(C)C2265.2Standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TMS,isomer #2C[Si](C)(C)N(C1=NC=NC2=C1N=CN2CCC(=O)O)[Si](C)(C)C2287.1Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TMS,isomer #2C[Si](C)(C)N(C1=NC=NC2=C1N=CN2CCC(=O)O)[Si](C)(C)C2373.5Standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CCN1C=NC2=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C212283.1Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CCN1C=NC2=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C212354.5Standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCN1C=NC2=C(N)N=CN=C212507.8Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC1=NC=NC2=C1N=CN2CCC(=O)O2539.3Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1=NC=NC2=C1N=CN2CCC(=O)O[Si](C)(C)C(C)(C)C2682.9Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1=NC=NC2=C1N=CN2CCC(=O)O[Si](C)(C)C(C)(C)C2725.8Standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C1=NC=NC2=C1N=CN2CCC(=O)O)[Si](C)(C)C(C)(C)C2719.9Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C1=NC=NC2=C1N=CN2CCC(=O)O)[Si](C)(C)C(C)(C)C2813.5Standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCN1C=NC2=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=CN=C212848.5Semi standard non polar33892256
6-Amino-9H-purine-9-propanoic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCN1C=NC2=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=CN=C213027.8Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 6-Amino-9H-purine-9-propanoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-08nj-1900000000-e9e98b5e794018f544ee2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-Amino-9H-purine-9-propanoic acid GC-MS (1 TMS) - 70eV, Positivesplash10-00di-3590000000-936b004b77df906c564d2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-Amino-9H-purine-9-propanoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-Amino-9H-purine-9-propanoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 10V, Positive-QTOFsplash10-0a4l-0970000000-c9da99b0e1369601c9682016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 20V, Positive-QTOFsplash10-000l-0910000000-50ff13ed808cc967405b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 40V, Positive-QTOFsplash10-052r-4900000000-e72519ae88e0bdd2d9a92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 10V, Negative-QTOFsplash10-0a4i-0390000000-09e3f530cc0d6b77a8772016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 20V, Negative-QTOFsplash10-001i-0910000000-2b49fd58a6b589afbcd82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 40V, Negative-QTOFsplash10-053r-2900000000-5fa94e8c187eefddb7232016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 10V, Negative-QTOFsplash10-001i-0900000000-0721192934f790a050fc2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 20V, Negative-QTOFsplash10-001i-0900000000-e210ce5380bd6fea160e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 40V, Negative-QTOFsplash10-0a59-2900000000-54c2744f506c39ed04312021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 10V, Positive-QTOFsplash10-0a4i-0290000000-a03267ffb4d3934f17a82021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 20V, Positive-QTOFsplash10-000i-0920000000-642018f8dc64895ecd972021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Amino-9H-purine-9-propanoic acid 40V, Positive-QTOFsplash10-066r-1900000000-6250865ea0d0e3c793f92021-09-24Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB001210
KNApSAcK IDC00054877
Chemspider ID223969
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound255450
PDB IDNot Available
ChEBI ID681033
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .