Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:34:24 UTC
Update Date2022-03-07 02:52:24 UTC
HMDB IDHMDB0030046
Secondary Accession Numbers
  • HMDB30046
Metabolite Identification
Common NameAsparagoside A
DescriptionAsparagoside A belongs to the class of organic compounds known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative. Based on a literature review a small amount of articles have been published on Asparagoside A.
Structure
Data?1563861929
Synonyms
ValueSource
(25S)-5beta-Spirostan-3beta-ol 3-O-beta-D-glucosideHMDB
(25S)-5b-Spirostan-3b-ol 3-O-b-D-glucosideHMDB
(25S)-5Β-spirostan-3β-ol 3-O-β-D-glucosideHMDB
(25S)-5beta-Spirostan-3beta-ol 3-O-beta-D- glucosideHMDB
(25S)-5beta-Spirostan-3beta-yl beta-D-glucopyranosideHMDB
(25S)-5beta-Spirostan-3beta-yl beta-D-glucosideHMDB
25S-5-beta-SPIROSTAN-3-beta-ol-3-O-betHMDB
Sarsasaponin monoglucosideHMDB
Chemical FormulaC33H54O8
Average Molecular Weight578.7771
Monoisotopic Molecular Weight578.381868704
IUPAC Name2-(hydroxymethyl)-6-{5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane]oxy}oxane-3,4,5-triol
Traditional Name2-(hydroxymethyl)-6-{5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane]oxy}oxane-3,4,5-triol
CAS Registry Number14835-43-9
SMILES
CC1C2C(CC3C4CCC5CC(CCC5(C)C4CCC23C)OC2OC(CO)C(O)C(O)C2O)OC11CCC(C)CO1
InChI Identifier
InChI=1S/C33H54O8/c1-17-7-12-33(38-16-17)18(2)26-24(41-33)14-23-21-6-5-19-13-20(8-10-31(19,3)22(21)9-11-32(23,26)4)39-30-29(37)28(36)27(35)25(15-34)40-30/h17-30,34-37H,5-16H2,1-4H3
InChI KeyZNEIIZNXGCIAAL-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassSteroidal glycosides
Direct ParentSteroidal saponins
Alternative Parents
Substituents
  • Steroidal saponin
  • Triterpenoid
  • Spirostane skeleton
  • Glycosyl compound
  • O-glycosyl compound
  • Ketal
  • Monosaccharide
  • Oxane
  • Tetrahydrofuran
  • Secondary alcohol
  • Polyol
  • Organoheterocyclic compound
  • Oxacycle
  • Acetal
  • Primary alcohol
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point245 - 247 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0055 g/LALOGPS
logP2.79ALOGPS
logP3.56ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)12.21ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area117.84 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity151.83 m³·mol⁻¹ChemAxon
Polarizability67.92 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+231.40931661259
DarkChem[M-H]-223.14231661259
DeepCCS[M-2H]-274.18530932474
DeepCCS[M+Na]+250.59230932474
AllCCS[M+H]+238.432859911
AllCCS[M+H-H2O]+237.532859911
AllCCS[M+NH4]+239.332859911
AllCCS[M+Na]+239.532859911
AllCCS[M-H]-217.732859911
AllCCS[M+Na-2H]-221.332859911
AllCCS[M+HCOO]-225.332859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.7.19 minutes32390414
Predicted by Siyang on May 30, 202217.3437 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20222.78 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid73.7 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid3652.2 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid195.4 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid250.1 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid173.0 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid611.9 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid811.6 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid772.0 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)134.3 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1380.9 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid675.8 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1979.7 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid488.0 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid523.8 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate172.9 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA276.1 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water10.2 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Asparagoside ACC1C2C(CC3C4CCC5CC(CCC5(C)C4CCC23C)OC2OC(CO)C(O)C(O)C2O)OC11CCC(C)CO13104.4Standard polar33892256
Asparagoside ACC1C2C(CC3C4CCC5CC(CCC5(C)C4CCC23C)OC2OC(CO)C(O)C(O)C2O)OC11CCC(C)CO14030.8Standard non polar33892256
Asparagoside ACC1C2C(CC3C4CCC5CC(CCC5(C)C4CCC23C)OC2OC(CO)C(O)C(O)C2O)OC11CCC(C)CO14586.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Asparagoside A,1TMS,isomer #1CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O)C(O)C6O)CCC5(C)C4CCC3(C)C1C2C4513.2Semi standard non polar33892256
Asparagoside A,1TMS,isomer #2CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C)C(O)C6O)CCC5(C)C4CCC3(C)C1C2C4508.0Semi standard non polar33892256
Asparagoside A,1TMS,isomer #3CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O)C(O[Si](C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4485.8Semi standard non polar33892256
Asparagoside A,1TMS,isomer #4CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O)C(O)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4489.0Semi standard non polar33892256
Asparagoside A,2TMS,isomer #1CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C6O)CCC5(C)C4CCC3(C)C1C2C4442.6Semi standard non polar33892256
Asparagoside A,2TMS,isomer #2CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4415.6Semi standard non polar33892256
Asparagoside A,2TMS,isomer #3CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O)C(O)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4437.4Semi standard non polar33892256
Asparagoside A,2TMS,isomer #4CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4393.7Semi standard non polar33892256
Asparagoside A,2TMS,isomer #5CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C)C(O)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4406.8Semi standard non polar33892256
Asparagoside A,2TMS,isomer #6CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O)C(O[Si](C)(C)C)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4401.6Semi standard non polar33892256
Asparagoside A,3TMS,isomer #1CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4350.7Semi standard non polar33892256
Asparagoside A,3TMS,isomer #2CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4348.3Semi standard non polar33892256
Asparagoside A,3TMS,isomer #3CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4338.5Semi standard non polar33892256
Asparagoside A,3TMS,isomer #4CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4348.5Semi standard non polar33892256
Asparagoside A,4TMS,isomer #1CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C6O[Si](C)(C)C)CCC5(C)C4CCC3(C)C1C2C4298.5Semi standard non polar33892256
Asparagoside A,1TBDMS,isomer #1CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C6O)CCC5(C)C4CCC3(C)C1C2C4736.9Semi standard non polar33892256
Asparagoside A,1TBDMS,isomer #2CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C6O)CCC5(C)C4CCC3(C)C1C2C4726.6Semi standard non polar33892256
Asparagoside A,1TBDMS,isomer #3CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4702.4Semi standard non polar33892256
Asparagoside A,1TBDMS,isomer #4CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O)C(O)C6O[Si](C)(C)C(C)(C)C)CCC5(C)C4CCC3(C)C1C2C4706.1Semi standard non polar33892256
Asparagoside A,2TBDMS,isomer #1CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C6O)CCC5(C)C4CCC3(C)C1C2C4874.4Semi standard non polar33892256
Asparagoside A,2TBDMS,isomer #2CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4860.0Semi standard non polar33892256
Asparagoside A,2TBDMS,isomer #3CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C6O[Si](C)(C)C(C)(C)C)CCC5(C)C4CCC3(C)C1C2C4868.8Semi standard non polar33892256
Asparagoside A,2TBDMS,isomer #4CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C6O)CCC5(C)C4CCC3(C)C1C2C4823.4Semi standard non polar33892256
Asparagoside A,2TBDMS,isomer #5CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C6O[Si](C)(C)C(C)(C)C)CCC5(C)C4CCC3(C)C1C2C4838.3Semi standard non polar33892256
Asparagoside A,2TBDMS,isomer #6CC1CCC2(OC1)OC1CC3C4CCC5CC(OC6OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C6O[Si](C)(C)C(C)(C)C)CCC5(C)C4CCC3(C)C1C2C4836.7Semi standard non polar33892256
Spectra
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB020810
KNApSAcK IDC00003563
Chemspider ID389388
KEGG Compound IDC08886
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound440454
PDB IDNot Available
ChEBI ID15579
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1813281
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.