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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 17:34:56 UTC

Update Date

2022-03-07 02:52:26 UTC

HMDB ID

HMDB0030127

Secondary Accession Numbers

HMDB30127

Metabolite Identification

Common Name

Withaperuvin E

Description

Withaperuvin E, also known as ketopelenolid-a or oxopelenolide a, belongs to the class of organic compounds known as withanolides and derivatives. These are c28 steroids structurally characterized by an ergostane skeleton usually functionalized at carbons 1, 22 and 26 to form a lactone ring. Based on a literature review a small amount of articles have been published on Withaperuvin E.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 05061305012D          

 36 41  0  0  0  0            999 V2000
    9.0978    2.1617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3064    3.7984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8899    3.0027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5214    2.5711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5817    1.7620    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8971    2.2807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6168    1.5048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3335    2.7164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1456    2.8616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0484    0.9486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7313    1.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6803    2.3423    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3047    0.5338    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4412    2.6612    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5455    3.4796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0532    1.9404    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5850    1.3097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7092    2.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1486    0.8741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0237    2.8418    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4926    0.3886    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8889    3.9791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6774    2.2309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2411    1.7952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2629    2.5229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3971    1.4549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5020    2.2041    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9608    1.0193    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9895    3.2018    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8683    0.0982    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9932    4.7974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1797    3.2838    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1995    0.6540    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6235    3.0201    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1280    3.6602    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6805    0.2434    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  7  6  2  0  0  0  0
  9  8  1  0  0  0  0
 11 10  1  0  0  0  0
 14  1  1  0  0  0  0
 14 12  1  0  0  0  0
 15  2  1  0  0  0  0
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 16  8  1  0  0  0  0
 17 13  1  0  0  0  0
 17 16  1  0  0  0  0
 18  6  1  0  0  0  0
 19  7  1  0  0  0  0
 20 12  1  0  0  0  0
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 22 15  1  0  0  0  0
 23  3  1  0  0  0  0
 23  9  1  0  0  0  0
 24  4  1  0  0  0  0
 24 16  1  0  0  0  0
 24 18  1  0  0  0  0
 25  5  1  0  0  0  0
 25 20  1  0  0  0  0
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 26 23  1  0  0  0  0
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 28 19  1  0  0  0  0
 28 21  1  0  0  0  0
 28 24  1  0  0  0  0
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 31 22  2  0  0  0  0
 32 25  1  0  0  0  0
 33 26  1  0  0  0  0
 34 27  1  0  0  0  0
 35 20  1  0  0  0  0
 35 22  1  0  0  0  0
 36 21  1  0  0  0  0
 36 28  1  0  0  0  0
M  END

HMDB0030127
     RDKit          3D
Withaperuvin E
 72 77  0  0  0  0  0  0  0  0999 V2000
    5.3817    0.8149    2.4878 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1143    0.1587    1.1849 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.0605    1.9842    0.2024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5210    1.6257    1.5540 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.5883   -0.1781   -3.2195 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6482   -1.7752   -3.0286 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.2440   -0.7316    1.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
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  2  3  2  0
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 36 71  1  0
 36 72  1  0
M  END


  Mrv0541 05061305012D          

 36 41  0  0  0  0            999 V2000
    9.0978    2.1617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3064    3.7984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8899    3.0027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5214    2.5711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5817    1.7620    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8971    2.2807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6168    1.5048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3335    2.7164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1456    2.8616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0484    0.9486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7313    1.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6803    2.3423    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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 32 25  1  0  0  0  0
 33 26  1  0  0  0  0
 34 27  1  0  0  0  0
 35 20  1  0  0  0  0
 35 22  1  0  0  0  0
 36 21  1  0  0  0  0
 36 28  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0030127

> <DATABASE_NAME>
hmdb

> <SMILES>
CC1=C(C)C(=O)OC(C1)C(C)(O)C1(O)CCC2(O)C3CC4OC44C(=O)C=CC(=O)C4(C)C3CCC12C

> <INCHI_IDENTIFIER>
InChI=1S/C28H36O8/c1-14-12-20(35-22(31)15(14)2)25(5,32)27(34)11-10-26(33)17-13-21-28(36-21)19(30)7-6-18(29)24(28,4)16(17)8-9-23(26,27)3/h6-7,16-17,20-21,32-34H,8-13H2,1-5H3

> <INCHI_KEY>
DHNMHYCYRGRLRY-UHFFFAOYSA-N

> <FORMULA>
C28H36O8

> <MOLECULAR_WEIGHT>
500.5806

> <EXACT_MASS>
500.241018128

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_AVERAGE_POLARIZABILITY>
52.823146129141335

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
15-[1-(4,5-dimethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl)-1-hydroxyethyl]-12,15-dihydroxy-2,16-dimethyl-8-oxapentacyclo[9.7.0.0²,⁷.0⁷,⁹.0¹²,¹⁶]octadec-4-ene-3,6-dione

> <ALOGPS_LOGP>
1.47

> <JCHEM_LOGP>
2.5419800180000003

> <ALOGPS_LOGS>
-3.46

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.838525145887303

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.717330524377129

> <JCHEM_PKA_STRONGEST_BASIC>
-3.201030312637884

> <JCHEM_POLAR_SURFACE_AREA>
133.66

> <JCHEM_REFRACTIVITY>
128.92769999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.74e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
15-[1-(4,5-dimethyl-6-oxo-2,3-dihydropyran-2-yl)-1-hydroxyethyl]-12,15-dihydroxy-2,16-dimethyl-8-oxapentacyclo[9.7.0.0²,⁷.0⁷,⁹.0¹²,¹⁶]octadec-4-ene-3,6-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0030127
     RDKit          3D
Withaperuvin E
 72 77  0  0  0  0  0  0  0  0999 V2000
    5.3817    0.8149    2.4878 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1143    0.1587    1.1849 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1417   -0.2956    0.5026 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5465   -0.1807    0.9750 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8780   -0.9467   -0.7709 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8286   -1.4117   -1.4878 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5972   -1.0592   -1.1996 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5553   -0.1948   -0.7173 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2216   -0.7944   -1.1321 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3799   -1.0586   -2.6123 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1371   -2.0475   -0.5353 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1318    0.0650   -0.7166 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2073    0.1922    0.6931 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1690    1.4822   -1.2201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2798    1.9930   -1.1634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0084    0.8840   -0.4472 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7542    1.0093    0.8940 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4848    0.8731   -0.6328 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0605    1.9842    0.2024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5210    1.6257    1.5540 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0401    0.5945    2.3099 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2487    0.4605    1.6795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5187    0.3990    2.3963 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5238    0.2128    3.6364 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7613    0.5565    1.6507 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7060    0.2820    0.3555 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4959   -0.1516   -0.3094 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4756   -0.2560   -1.5479 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2977   -0.4662    0.4835 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5278   -1.8690    1.0641 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0256   -0.4791   -0.3108 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0478   -1.3899    0.3724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7686   -1.5780   -0.4377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2842   -0.3266   -1.0546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5095   -0.3537   -2.5411 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7022    0.0657    0.7385 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4395    1.0307    3.0497 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8182    1.8211    2.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1127    0.2594    3.0933 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1827    0.0312    0.1092 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8408   -1.1290    1.4469 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6294    0.6557    1.7191 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7191    0.7781   -1.2617 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3507   -1.6512   -2.6695 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5883   -0.1781   -3.2195 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6482   -1.7752   -3.0286 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5618   -2.7595   -1.0926 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8788   -0.6120    1.1571 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4963    1.5704   -2.2675 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8287    2.1223   -0.6020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2892    2.8907   -0.5142 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6757    2.1911   -2.1668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6575    1.9543    1.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7320    1.1634   -1.6820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9198    2.5006   -0.3216 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2879    2.7915    0.2930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7688    2.5374    2.1763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6822    0.8788    2.1230 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6238    0.3951   -0.2115 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5752   -1.8193    1.4860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8783   -2.0686    1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -2.6388    0.2954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2824   -0.9860   -1.2896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5332   -2.3986    0.4289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7685   -1.1204    1.3849 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0374   -2.3189   -1.2507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0770   -2.1254    0.2090 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2407    0.1592   -3.1385 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4868    0.1233   -2.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6879   -1.4267   -2.8276 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2844    1.0910    0.9860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2440   -0.7316    1.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  3  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
  9 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 23 25  1  0
 25 26  2  0
 26 27  1  0
 27 28  2  0
 27 29  1  0
 29 30  1  0
 29 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
  8 36  1  0
 36  2  1  0
 34 12  1  0
 34 16  1  0
 31 18  1  0
 22 20  1  0
 29 22  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  4 40  1  0
  4 41  1  0
  4 42  1  0
  8 43  1  0
 10 44  1  0
 10 45  1  0
 10 46  1  0
 11 47  1  0
 13 48  1  0
 14 49  1  0
 14 50  1  0
 15 51  1  0
 15 52  1  0
 17 53  1  0
 18 54  1  0
 19 55  1  0
 19 56  1  0
 20 57  1  0
 25 58  1  0
 26 59  1  0
 30 60  1  0
 30 61  1  0
 30 62  1  0
 31 63  1  0
 32 64  1  0
 32 65  1  0
 33 66  1  0
 33 67  1  0
 35 68  1  0
 35 69  1  0
 35 70  1  0
 36 71  1  0
 36 72  1  0
M  END

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      16.983   4.035   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      17.372   7.090   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.128   5.605   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.707   4.799   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.286   3.289   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.675   4.257   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.151   2.809   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.223   5.071   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.738   5.342   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.424   1.771   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      10.698   2.635   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.337   4.372   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.169   0.996   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      15.757   4.968   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      15.952   6.495   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.699   3.622   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.692   2.445   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.191   4.528   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.144   1.632   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      13.111   5.305   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.653   0.725   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      14.726   7.428   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       8.731   4.164   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.183   3.351   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      11.691   4.709   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.208   2.716   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      10.270   4.114   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       3.660   1.903   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       3.714   5.977   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0       1.621   0.183   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0      14.921   8.955   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0      11.535   6.130   0.000  0.00  0.00           O+0
HETATM   33  O   UNK     0       7.839   1.221   0.000  0.00  0.00           O+0
HETATM   34  O   UNK     0      10.497   5.638   0.000  0.00  0.00           O+0
HETATM   35  O   UNK     0      13.306   6.832   0.000  0.00  0.00           O+0
HETATM   36  O   UNK     0       3.137   0.454   0.000  0.00  0.00           O+0
CONECT    1   14                                                            
CONECT    2   15                                                            
CONECT    3   23                                                            
CONECT    4   24                                                            
CONECT    5   25                                                            
CONECT    6    7   18                                                       
CONECT    7    6   19                                                       
CONECT    8    9   16                                                       
CONECT    9    8   23                                                       
CONECT   10   11   26                                                       
CONECT   11   10   27                                                       
CONECT   12   14   20                                                       
CONECT   13   17   21                                                       
CONECT   14    1   12   15                                                  
CONECT   15    2   14   22                                                  
CONECT   16    8   17   24                                                  
CONECT   17   13   16   26                                                  
CONECT   18    6   24   29                                                  
CONECT   19    7   28   30                                                  
CONECT   20   12   25   35                                                  
CONECT   21   13   28   36                                                  
CONECT   22   15   31   35                                                  
CONECT   23    3    9   26   27                                             
CONECT   24    4   16   18   28                                             
CONECT   25    5   20   27   32                                             
CONECT   26   10   17   23   33                                             
CONECT   27   11   23   25   34                                             
CONECT   28   19   21   24   36                                             
CONECT   29   18                                                            
CONECT   30   19                                                            
CONECT   31   22                                                            
CONECT   32   25                                                            
CONECT   33   26                                                            
CONECT   34   27                                                            
CONECT   35   20   22                                                       
CONECT   36   21   28                                                       
MASTER        0    0    0    0    0    0    0    0   36    0   82    0
END

COMPND    HMDB0030127
HETATM    1  C1  UNL     1       5.382   0.815   2.488  1.00  0.00           C  
HETATM    2  C2  UNL     1       5.114   0.159   1.185  1.00  0.00           C  
HETATM    3  C3  UNL     1       6.142  -0.296   0.503  1.00  0.00           C  
HETATM    4  C4  UNL     1       7.546  -0.181   0.975  1.00  0.00           C  
HETATM    5  C5  UNL     1       5.878  -0.947  -0.771  1.00  0.00           C  
HETATM    6  O1  UNL     1       6.829  -1.412  -1.488  1.00  0.00           O  
HETATM    7  O2  UNL     1       4.597  -1.059  -1.200  1.00  0.00           O  
HETATM    8  C6  UNL     1       3.555  -0.195  -0.717  1.00  0.00           C  
HETATM    9  C7  UNL     1       2.222  -0.794  -1.132  1.00  0.00           C  
HETATM   10  C8  UNL     1       2.380  -1.059  -2.612  1.00  0.00           C  
HETATM   11  O3  UNL     1       2.137  -2.048  -0.535  1.00  0.00           O  
HETATM   12  C9  UNL     1       1.132   0.065  -0.717  1.00  0.00           C  
HETATM   13  O4  UNL     1       1.207   0.192   0.693  1.00  0.00           O  
HETATM   14  C10 UNL     1       1.169   1.482  -1.220  1.00  0.00           C  
HETATM   15  C11 UNL     1      -0.280   1.993  -1.163  1.00  0.00           C  
HETATM   16  C12 UNL     1      -1.008   0.884  -0.447  1.00  0.00           C  
HETATM   17  O5  UNL     1      -0.754   1.009   0.894  1.00  0.00           O  
HETATM   18  C13 UNL     1      -2.485   0.873  -0.633  1.00  0.00           C  
HETATM   19  C14 UNL     1      -3.060   1.984   0.202  1.00  0.00           C  
HETATM   20  C15 UNL     1      -3.521   1.626   1.554  1.00  0.00           C  
HETATM   21  O6  UNL     1      -3.040   0.595   2.310  1.00  0.00           O  
HETATM   22  C16 UNL     1      -4.249   0.461   1.679  1.00  0.00           C  
HETATM   23  C17 UNL     1      -5.519   0.399   2.396  1.00  0.00           C  
HETATM   24  O7  UNL     1      -5.524   0.213   3.636  1.00  0.00           O  
HETATM   25  C18 UNL     1      -6.761   0.556   1.651  1.00  0.00           C  
HETATM   26  C19 UNL     1      -6.706   0.282   0.355  1.00  0.00           C  
HETATM   27  C20 UNL     1      -5.496  -0.152  -0.309  1.00  0.00           C  
HETATM   28  O8  UNL     1      -5.476  -0.256  -1.548  1.00  0.00           O  
HETATM   29  C21 UNL     1      -4.298  -0.466   0.483  1.00  0.00           C  
HETATM   30  C22 UNL     1      -4.528  -1.869   1.064  1.00  0.00           C  
HETATM   31  C23 UNL     1      -3.026  -0.479  -0.311  1.00  0.00           C  
HETATM   32  C24 UNL     1      -2.048  -1.390   0.372  1.00  0.00           C  
HETATM   33  C25 UNL     1      -0.769  -1.578  -0.438  1.00  0.00           C  
HETATM   34  C26 UNL     1      -0.284  -0.327  -1.055  1.00  0.00           C  
HETATM   35  C27 UNL     1      -0.510  -0.354  -2.541  1.00  0.00           C  
HETATM   36  C28 UNL     1       3.702   0.066   0.738  1.00  0.00           C  
HETATM   37  H1  UNL     1       4.440   1.031   3.050  1.00  0.00           H  
HETATM   38  H2  UNL     1       5.818   1.821   2.256  1.00  0.00           H  
HETATM   39  H3  UNL     1       6.113   0.259   3.093  1.00  0.00           H  
HETATM   40  H4  UNL     1       8.183   0.031   0.109  1.00  0.00           H  
HETATM   41  H5  UNL     1       7.841  -1.129   1.447  1.00  0.00           H  
HETATM   42  H6  UNL     1       7.629   0.656   1.719  1.00  0.00           H  
HETATM   43  H7  UNL     1       3.719   0.778  -1.262  1.00  0.00           H  
HETATM   44  H8  UNL     1       3.351  -1.651  -2.670  1.00  0.00           H  
HETATM   45  H9  UNL     1       2.588  -0.178  -3.220  1.00  0.00           H  
HETATM   46  H10 UNL     1       1.648  -1.775  -3.029  1.00  0.00           H  
HETATM   47  H11 UNL     1       2.562  -2.759  -1.093  1.00  0.00           H  
HETATM   48  H12 UNL     1       0.879  -0.612   1.157  1.00  0.00           H  
HETATM   49  H13 UNL     1       1.496   1.570  -2.267  1.00  0.00           H  
HETATM   50  H14 UNL     1       1.829   2.122  -0.602  1.00  0.00           H  
HETATM   51  H15 UNL     1      -0.289   2.891  -0.514  1.00  0.00           H  
HETATM   52  H16 UNL     1      -0.676   2.191  -2.167  1.00  0.00           H  
HETATM   53  H17 UNL     1      -0.657   1.954   1.193  1.00  0.00           H  
HETATM   54  H18 UNL     1      -2.732   1.163  -1.682  1.00  0.00           H  
HETATM   55  H19 UNL     1      -3.920   2.501  -0.322  1.00  0.00           H  
HETATM   56  H20 UNL     1      -2.288   2.791   0.293  1.00  0.00           H  
HETATM   57  H21 UNL     1      -3.769   2.537   2.176  1.00  0.00           H  
HETATM   58  H22 UNL     1      -7.682   0.879   2.123  1.00  0.00           H  
HETATM   59  H23 UNL     1      -7.624   0.395  -0.212  1.00  0.00           H  
HETATM   60  H24 UNL     1      -5.575  -1.819   1.486  1.00  0.00           H  
HETATM   61  H25 UNL     1      -3.878  -2.069   1.925  1.00  0.00           H  
HETATM   62  H26 UNL     1      -4.553  -2.639   0.295  1.00  0.00           H  
HETATM   63  H27 UNL     1      -3.282  -0.986  -1.290  1.00  0.00           H  
HETATM   64  H28 UNL     1      -2.533  -2.399   0.429  1.00  0.00           H  
HETATM   65  H29 UNL     1      -1.769  -1.120   1.385  1.00  0.00           H  
HETATM   66  H30 UNL     1      -1.037  -2.319  -1.251  1.00  0.00           H  
HETATM   67  H31 UNL     1      -0.077  -2.125   0.209  1.00  0.00           H  
HETATM   68  H32 UNL     1       0.241   0.159  -3.139  1.00  0.00           H  
HETATM   69  H33 UNL     1      -1.487   0.123  -2.853  1.00  0.00           H  
HETATM   70  H34 UNL     1      -0.688  -1.427  -2.828  1.00  0.00           H  
HETATM   71  H35 UNL     1       3.284   1.091   0.986  1.00  0.00           H  
HETATM   72  H36 UNL     1       3.244  -0.732   1.361  1.00  0.00           H  
CONECT    1    2   37   38   39
CONECT    2    3    3   36
CONECT    3    4    5
CONECT    4   40   41   42
CONECT    5    6    6    7
CONECT    7    8
CONECT    8    9   36   43
CONECT    9   10   11   12
CONECT   10   44   45   46
CONECT   11   47
CONECT   12   13   14   34
CONECT   13   48
CONECT   14   15   49   50
CONECT   15   16   51   52
CONECT   16   17   18   34
CONECT   17   53
CONECT   18   19   31   54
CONECT   19   20   55   56
CONECT   20   21   22   57
CONECT   21   22
CONECT   22   23   29
CONECT   23   24   24   25
CONECT   25   26   26   58
CONECT   26   27   59
CONECT   27   28   28   29
CONECT   29   30   31
CONECT   30   60   61   62
CONECT   31   32   63
CONECT   32   33   64   65
CONECT   33   34   66   67
CONECT   34   35
CONECT   35   68   69   70
CONECT   36   71   72
END

HMDB0030127
     RDKit          3D
Withaperuvin E
 72 77  0  0  0  0  0  0  0  0999 V2000
    5.3817    0.8149    2.4878 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1143    0.1587    1.1849 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1417   -0.2956    0.5026 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5465   -0.1807    0.9750 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8780   -0.9467   -0.7709 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8286   -1.4117   -1.4878 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5972   -1.0592   -1.1996 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5553   -0.1948   -0.7173 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2216   -0.7944   -1.1321 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3799   -1.0586   -2.6123 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1371   -2.0475   -0.5353 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1318    0.0650   -0.7166 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2073    0.1922    0.6931 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1690    1.4822   -1.2201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2798    1.9930   -1.1634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0084    0.8840   -0.4472 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7542    1.0093    0.8940 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4848    0.8731   -0.6328 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0605    1.9842    0.2024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5210    1.6257    1.5540 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0401    0.5945    2.3099 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2487    0.4605    1.6795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5187    0.3990    2.3963 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5238    0.2128    3.6364 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7613    0.5565    1.6507 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7060    0.2820    0.3555 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4959   -0.1516   -0.3094 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4756   -0.2560   -1.5479 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2977   -0.4662    0.4835 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5278   -1.8690    1.0641 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0256   -0.4791   -0.3108 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0478   -1.3899    0.3724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7686   -1.5780   -0.4377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2842   -0.3266   -1.0546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5095   -0.3537   -2.5411 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7022    0.0657    0.7385 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4395    1.0307    3.0497 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8182    1.8211    2.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1127    0.2594    3.0933 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1827    0.0312    0.1092 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8408   -1.1290    1.4469 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6294    0.6557    1.7191 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7191    0.7781   -1.2617 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3507   -1.6512   -2.6695 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5883   -0.1781   -3.2195 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6482   -1.7752   -3.0286 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5618   -2.7595   -1.0926 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8788   -0.6120    1.1571 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4963    1.5704   -2.2675 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8287    2.1223   -0.6020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2892    2.8907   -0.5142 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6757    2.1911   -2.1668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6575    1.9543    1.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7320    1.1634   -1.6820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9198    2.5006   -0.3216 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2879    2.7915    0.2930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7688    2.5374    2.1763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6822    0.8788    2.1230 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6238    0.3951   -0.2115 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5752   -1.8193    1.4860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8783   -2.0686    1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -2.6388    0.2954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2824   -0.9860   -1.2896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5332   -2.3986    0.4289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7685   -1.1204    1.3849 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0374   -2.3189   -1.2507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0770   -2.1254    0.2090 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2407    0.1592   -3.1385 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4868    0.1233   -2.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6879   -1.4267   -2.8276 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2844    1.0910    0.9860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2440   -0.7316    1.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  3  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
  9 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 23 25  1  0
 25 26  2  0
 26 27  1  0
 27 28  2  0
 27 29  1  0
 29 30  1  0
 29 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
  8 36  1  0
 36  2  1  0
 34 12  1  0
 34 16  1  0
 31 18  1  0
 22 20  1  0
 29 22  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  4 40  1  0
  4 41  1  0
  4 42  1  0
  8 43  1  0
 10 44  1  0
 10 45  1  0
 10 46  1  0
 11 47  1  0
 13 48  1  0
 14 49  1  0
 14 50  1  0
 15 51  1  0
 15 52  1  0
 17 53  1  0
 18 54  1  0
 19 55  1  0
 19 56  1  0
 20 57  1  0
 25 58  1  0
 26 59  1  0
 30 60  1  0
 30 61  1  0
 30 62  1  0
 31 63  1  0
 32 64  1  0
 32 65  1  0
 33 66  1  0
 33 67  1  0
 35 68  1  0
 35 69  1  0
 35 70  1  0
 36 71  1  0
 36 72  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
3-oxo-1(10)-Germacren-12,6-olide	HMDB
Ketopelenolid-a	HMDB
Oxopelenolide a	HMDB
14,17,20-Trihydroxy withanolide	HMDB
Withaperuvin-e	HMDB

Chemical Formula

C₂₈H₃₆O₈

Average Molecular Weight

500.5806

Monoisotopic Molecular Weight

500.241018128

IUPAC Name

15-[1-(4,5-dimethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl)-1-hydroxyethyl]-12,15-dihydroxy-2,16-dimethyl-8-oxapentacyclo[9.7.0.0²,⁷.0⁷,⁹.0¹²,¹⁶]octadec-4-ene-3,6-dione

Traditional Name

15-[1-(4,5-dimethyl-6-oxo-2,3-dihydropyran-2-yl)-1-hydroxyethyl]-12,15-dihydroxy-2,16-dimethyl-8-oxapentacyclo[9.7.0.0²,⁷.0⁷,⁹.0¹²,¹⁶]octadec-4-ene-3,6-dione

CAS Registry Number

Not Available

SMILES

CC1=C(C)C(=O)OC(C1)C(C)(O)C1(O)CCC2(O)C3CC4OC44C(=O)C=CC(=O)C4(C)C3CCC12C

InChI Identifier

InChI=1S/C28H36O8/c1-14-12-20(35-22(31)15(14)2)25(5,32)27(34)11-10-26(33)17-13-21-28(36-21)19(30)7-6-18(29)24(28,4)16(17)8-9-23(26,27)3/h6-7,16-17,20-21,32-34H,8-13H2,1-5H3

InChI Key

DHNMHYCYRGRLRY-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as withanolides and derivatives. These are c28 steroids structurally characterized by an ergostane skeleton usually functionalized at carbons 1, 22 and 26 to form a lactone ring.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroid lactones

Direct Parent

Withanolides and derivatives

Alternative Parents

Substituents

Withanolide-skeleton
5,6-epoxysteroid
Cyclohexenone
Dihydropyranone
Oxepane
Pyran
Cyclic alcohol
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tertiary alcohol
Carboxylic acid ester
Ketone
Lactone
Carboxylic acid derivative
Dialkyl ether
Oxirane
Ether
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Carbonyl group
Alcohol
Organic oxygen compound
Organic oxide
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Excreta

Biofluid or Excreta

Urine (HMDB: HMDB0030127)

Tissue

Nervous tissue

Hepatic tissue (HMDB: HMDB0030127)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0030127)

Source

Endogenous

Endogenous (HMDB: HMDB0030127)

Animal

Animal (HMDB: HMDB0030127)

Exogenous

Food

Food (HMDB: HMDB0030127)

Exogenous (HMDB: HMDB0030127)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0030127)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0030127)

Lipid metabolism pathway (HMDB: HMDB0030127)

Cellular process

Cell signaling (HMDB: HMDB0030127)

Biochemical process

Lipid transport (HMDB: HMDB0030127)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0030127)

Molecular messenger

Signaling molecule (HMDB: HMDB0030127)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0030127)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	248 - 250 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.17 g/L	ALOGPS
logP	1.47	ALOGPS
logP	2.54	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	12.72	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	133.66 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	128.93 m³·mol⁻¹	ChemAxon
Polarizability	52.82 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	215.869	31661259
DarkChem	[M-H]-	205.651	31661259
DeepCCS	[M-2H]-	246.307	30932474
DeepCCS	[M+Na]+	221.73	30932474
AllCCS	[M+H]+	216.1	32859911
AllCCS	[M+H-H2O]+	214.3	32859911
AllCCS	[M+NH4]+	217.7	32859911
AllCCS	[M+Na]+	218.1	32859911
AllCCS	[M-H]-	221.3	32859911
AllCCS	[M+Na-2H]-	223.2	32859911
AllCCS	[M+HCOO]-	225.4	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Withaperuvin E	CC1=C(C)C(=O)OC(C1)C(C)(O)C1(O)CCC2(O)C3CC4OC44C(=O)C=CC(=O)C4(C)C3CCC12C	4418.2	Standard polar	33892256
Withaperuvin E	CC1=C(C)C(=O)OC(C1)C(C)(O)C1(O)CCC2(O)C3CC4OC44C(=O)C=CC(=O)C4(C)C3CCC12C	3636.9	Standard non polar	33892256
Withaperuvin E	CC1=C(C)C(=O)OC(C1)C(C)(O)C1(O)CCC2(O)C3CC4OC44C(=O)C=CC(=O)C4(C)C3CCC12C	4250.8	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Withaperuvin E,1TMS,isomer #1	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C)C2(O)CCC3(O)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4196.9	Semi standard non polar	33892256
Withaperuvin E,1TMS,isomer #2	CC1=C(C)C(=O)OC(C(C)(O)C2(O[Si](C)(C)C)CCC3(O)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4198.6	Semi standard non polar	33892256
Withaperuvin E,1TMS,isomer #3	CC1=C(C)C(=O)OC(C(C)(O)C2(O)CCC3(O[Si](C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4216.2	Semi standard non polar	33892256
Withaperuvin E,2TMS,isomer #1	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C)C2(O[Si](C)(C)C)CCC3(O)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4165.0	Semi standard non polar	33892256
Withaperuvin E,2TMS,isomer #2	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C)C2(O)CCC3(O[Si](C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4174.0	Semi standard non polar	33892256
Withaperuvin E,2TMS,isomer #3	CC1=C(C)C(=O)OC(C(C)(O)C2(O[Si](C)(C)C)CCC3(O[Si](C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4178.3	Semi standard non polar	33892256
Withaperuvin E,3TMS,isomer #1	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C)C2(O[Si](C)(C)C)CCC3(O[Si](C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4112.1	Semi standard non polar	33892256
Withaperuvin E,1TBDMS,isomer #1	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C(C)(C)C)C2(O)CCC3(O)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4421.7	Semi standard non polar	33892256
Withaperuvin E,1TBDMS,isomer #2	CC1=C(C)C(=O)OC(C(C)(O)C2(O[Si](C)(C)C(C)(C)C)CCC3(O)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4420.3	Semi standard non polar	33892256
Withaperuvin E,1TBDMS,isomer #3	CC1=C(C)C(=O)OC(C(C)(O)C2(O)CCC3(O[Si](C)(C)C(C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4429.7	Semi standard non polar	33892256
Withaperuvin E,2TBDMS,isomer #1	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C(C)(C)C)C2(O[Si](C)(C)C(C)(C)C)CCC3(O)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4637.8	Semi standard non polar	33892256
Withaperuvin E,2TBDMS,isomer #2	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C(C)(C)C)C2(O)CCC3(O[Si](C)(C)C(C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4637.2	Semi standard non polar	33892256
Withaperuvin E,2TBDMS,isomer #3	CC1=C(C)C(=O)OC(C(C)(O)C2(O[Si](C)(C)C(C)(C)C)CCC3(O[Si](C)(C)C(C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4635.1	Semi standard non polar	33892256
Withaperuvin E,3TBDMS,isomer #1	CC1=C(C)C(=O)OC(C(C)(O[Si](C)(C)C(C)(C)C)C2(O[Si](C)(C)C(C)(C)C)CCC3(O[Si](C)(C)C(C)(C)C)C4CC5OC56C(=O)C=CC(=O)C6(C)C4CCC32C)C1	4797.3	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Withaperuvin E GC-MS (Non-derivatized) - 70eV, Positive	splash10-00or-2669400000-2382ab703867588f94ef	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Withaperuvin E GC-MS (2 TMS) - 70eV, Positive	splash10-01di-4561749000-78df15ae69494ba35867	2017-10-06	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 10V, Positive-QTOF	splash10-0f89-0003930000-1440e6b54cad8a38a6f2	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 20V, Positive-QTOF	splash10-0hh9-8206910000-ea303adcf7e799ae636a	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 40V, Positive-QTOF	splash10-0gba-4192100000-c62948f24286d2a02204	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 10V, Negative-QTOF	splash10-052b-0102900000-094ab1dc368ea93821af	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 20V, Negative-QTOF	splash10-02w9-1907300000-51ad1b375f37c15a0ad1	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 40V, Negative-QTOF	splash10-014i-9303000000-4be135b9c0c51ff7352f	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 10V, Negative-QTOF	splash10-0002-0005900000-b2a92c7950ea261c2ec3	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 20V, Negative-QTOF	splash10-0bvj-2009500000-3f9cc672dd43e5324f1c	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 40V, Negative-QTOF	splash10-0fr6-9401000000-64d04ead8b6d501e4b66	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 10V, Positive-QTOF	splash10-0udi-0001690000-7c45e19a22f13b96453f	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 20V, Positive-QTOF	splash10-0pe9-8209110000-bf0d73bf529f099ee7f5	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Withaperuvin E 40V, Positive-QTOF	splash10-0udi-3924000000-cb88dd14b899a0599b14	2021-09-22	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB001930

KNApSAcK ID

C00058268

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

85089867

PDB ID

Not Available

ChEBI ID

175839

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Withaperuvin E (HMDB0030127)

MOL for HMDB0030127 (Withaperuvin E)

3D MOL for HMDB0030127 (Withaperuvin E)

3D SDF for HMDB0030127 (Withaperuvin E)

3D-SDF for HMDB0030127 (Withaperuvin E)

PDB for HMDB0030127 (Withaperuvin E)

3D PDB for HMDB0030127 (Withaperuvin E)

SMILES for HMDB0030127 (Withaperuvin E)

INCHI for HMDB0030127 (Withaperuvin E)

Structure for HMDB0030127 (Withaperuvin E)

3D Structure for HMDB0030127 (Withaperuvin E)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra