Hmdb loader
Survey
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:35:04 UTC
Update Date2022-03-07 02:52:26 UTC
HMDB IDHMDB0030148
Secondary Accession Numbers
  • HMDB30148
Metabolite Identification
Common NamePrehumulinic acid
DescriptionPrehumulinic acid, also known as prehumulinate, belongs to the class of organic compounds known as vinylogous acids. These are organic compounds containing a hydroxyl group, which is indirectly attached to a carbonyl via an intervening vinyl (>C=C<) moiety. Prehumulinic acid has been detected, but not quantified in, alcoholic beverages. This could make prehumulinic acid a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Prehumulinic acid.
Structure
Data?1563861944
Synonyms
ValueSource
PrehumulinateGenerator
Chemical FormulaC16H24O4
Average Molecular Weight280.3594
Monoisotopic Molecular Weight280.167459256
IUPAC Name3,4-dihydroxy-5-(3-methylbut-2-en-1-yl)-2-(4-methylpentanoyl)cyclopent-2-en-1-one
Traditional Name3,4-dihydroxy-5-(3-methylbut-2-en-1-yl)-2-(4-methylpentanoyl)cyclopent-2-en-1-one
CAS Registry NumberNot Available
SMILES
CC(C)CCC(=O)C1=C(O)C(O)C(CC=C(C)C)C1=O
InChI Identifier
InChI=1S/C16H24O4/c1-9(2)5-7-11-14(18)13(16(20)15(11)19)12(17)8-6-10(3)4/h5,10-11,15,19-20H,6-8H2,1-4H3
InChI KeyNFUYEMRFZRYITM-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as vinylogous acids. These are organic compounds containing a hydroxyl group, which is indirectly attached to a carbonyl via an intervening vinyl (>C=C<) moiety.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassVinylogous acids
Sub ClassNot Available
Direct ParentVinylogous acids
Alternative Parents
Substituents
  • Vinylogous acid
  • Cyclic ketone
  • Secondary alcohol
  • Ketone
  • Enol
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point96.5 - 97.5 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.76 g/LALOGPS
logP2.24ALOGPS
logP2.85ChemAxon
logS-2.6ALOGPS
pKa (Strongest Acidic)1.82ChemAxon
pKa (Strongest Basic)-3.5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area74.6 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity79.77 m³·mol⁻¹ChemAxon
Polarizability32 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+173.53230932474
DeepCCS[M-H]-171.17430932474
DeepCCS[M-2H]-204.05930932474
DeepCCS[M+Na]+179.62530932474
AllCCS[M+H]+168.832859911
AllCCS[M+H-H2O]+165.532859911
AllCCS[M+NH4]+171.932859911
AllCCS[M+Na]+172.732859911
AllCCS[M-H]-172.832859911
AllCCS[M+Na-2H]-173.532859911
AllCCS[M+HCOO]-174.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Prehumulinic acidCC(C)CCC(=O)C1=C(O)C(O)C(CC=C(C)C)C1=O3266.4Standard polar33892256
Prehumulinic acidCC(C)CCC(=O)C1=C(O)C(O)C(CC=C(C)C)C1=O1913.0Standard non polar33892256
Prehumulinic acidCC(C)CCC(=O)C1=C(O)C(O)C(CC=C(C)C)C1=O1957.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Prehumulinic acid,1TMS,isomer #1CC(C)=CCC1C(=O)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C)C1O2141.5Semi standard non polar33892256
Prehumulinic acid,1TMS,isomer #2CC(C)=CCC1C(=O)C(C(=O)CCC(C)C)=C(O)C1O[Si](C)(C)C2134.9Semi standard non polar33892256
Prehumulinic acid,1TMS,isomer #3CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=O)CCC(C)C)=C(O)C1O2149.8Semi standard non polar33892256
Prehumulinic acid,1TMS,isomer #4CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O)C1O2208.0Semi standard non polar33892256
Prehumulinic acid,2TMS,isomer #1CC(C)=CCC1C(=O)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2218.2Semi standard non polar33892256
Prehumulinic acid,2TMS,isomer #2CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C)C1O2226.8Semi standard non polar33892256
Prehumulinic acid,2TMS,isomer #3CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O2288.9Semi standard non polar33892256
Prehumulinic acid,2TMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=O)CCC(C)C)=C(O)C1O[Si](C)(C)C2248.8Semi standard non polar33892256
Prehumulinic acid,2TMS,isomer #5CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O)C1O[Si](C)(C)C2270.7Semi standard non polar33892256
Prehumulinic acid,2TMS,isomer #6CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O)C1O2322.4Semi standard non polar33892256
Prehumulinic acid,3TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2276.8Semi standard non polar33892256
Prehumulinic acid,3TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2276.2Standard non polar33892256
Prehumulinic acid,3TMS,isomer #2CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2317.7Semi standard non polar33892256
Prehumulinic acid,3TMS,isomer #2CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2279.2Standard non polar33892256
Prehumulinic acid,3TMS,isomer #3CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O2336.3Semi standard non polar33892256
Prehumulinic acid,3TMS,isomer #3CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O2288.0Standard non polar33892256
Prehumulinic acid,3TMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O)C1O[Si](C)(C)C2362.9Semi standard non polar33892256
Prehumulinic acid,3TMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O)C1O[Si](C)(C)C2283.2Standard non polar33892256
Prehumulinic acid,4TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2334.3Semi standard non polar33892256
Prehumulinic acid,4TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C)=C(O[Si](C)(C)C)C1O[Si](C)(C)C2372.8Standard non polar33892256
Prehumulinic acid,1TBDMS,isomer #1CC(C)=CCC1C(=O)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O2381.9Semi standard non polar33892256
Prehumulinic acid,1TBDMS,isomer #2CC(C)=CCC1C(=O)C(C(=O)CCC(C)C)=C(O)C1O[Si](C)(C)C(C)(C)C2381.4Semi standard non polar33892256
Prehumulinic acid,1TBDMS,isomer #3CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=O)CCC(C)C)=C(O)C1O2387.8Semi standard non polar33892256
Prehumulinic acid,1TBDMS,isomer #4CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O)C1O2429.1Semi standard non polar33892256
Prehumulinic acid,2TBDMS,isomer #1CC(C)=CCC1C(=O)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2665.7Semi standard non polar33892256
Prehumulinic acid,2TBDMS,isomer #2CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O2677.7Semi standard non polar33892256
Prehumulinic acid,2TBDMS,isomer #3CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O2713.7Semi standard non polar33892256
Prehumulinic acid,2TBDMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=O)CCC(C)C)=C(O)C1O[Si](C)(C)C(C)(C)C2683.4Semi standard non polar33892256
Prehumulinic acid,2TBDMS,isomer #5CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O)C1O[Si](C)(C)C(C)(C)C2702.3Semi standard non polar33892256
Prehumulinic acid,2TBDMS,isomer #6CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O)C1O2750.5Semi standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2933.0Semi standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=O)CCC(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2811.7Standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #2CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2963.4Semi standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #2CC(C)=CCC1C(=O)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2821.7Standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #3CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O2997.7Semi standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #3CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O2830.3Standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O)C1O[Si](C)(C)C(C)(C)C2975.8Semi standard non polar33892256
Prehumulinic acid,3TBDMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O)C1O[Si](C)(C)C(C)(C)C2829.5Standard non polar33892256
Prehumulinic acid,4TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C3194.2Semi standard non polar33892256
Prehumulinic acid,4TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C(C(=CCC(C)C)O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C3070.3Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Prehumulinic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-01ox-8890000000-507542d2f7340948dfb12017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Prehumulinic acid GC-MS (2 TMS) - 70eV, Positivesplash10-0a6r-9114500000-b65b6b8cdad03e9244e72017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Prehumulinic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 10V, Positive-QTOFsplash10-001i-1190000000-4483c575c6efe33310452016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 20V, Positive-QTOFsplash10-05o9-6790000000-6e27034ed307c50ecbfe2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 40V, Positive-QTOFsplash10-00lr-9300000000-a7e8bad562b2285b76972016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 10V, Negative-QTOFsplash10-004i-0190000000-70bc357c0954113ccd312016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 20V, Negative-QTOFsplash10-01si-3970000000-6ae7680efb6b2a4994152016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 40V, Negative-QTOFsplash10-06sl-9630000000-5a20f6cb004f5b2b51712016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 10V, Negative-QTOFsplash10-004i-0090000000-8597d5b937876f2bed9f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 20V, Negative-QTOFsplash10-004i-0980000000-4213e938876d0c9ec8632021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 40V, Negative-QTOFsplash10-07s3-9820000000-6ab1f5da02e51448ac0c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 10V, Positive-QTOFsplash10-001i-0090000000-547a641924430fe1ddb12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 20V, Positive-QTOFsplash10-001i-9670000000-e8b3b0a71ab002468a1b2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prehumulinic acid 40V, Positive-QTOFsplash10-00rx-9410000000-8c78807105f1164157702021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB001956
KNApSAcK IDNot Available
Chemspider ID35013147
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .