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Record Information
Version5.0
StatusDetected and Quantified
Creation Date2012-09-11 17:40:34 UTC
Update Date2022-03-07 02:52:48 UTC
HMDB IDHMDB0031035
Secondary Accession Numbers
  • HMDB31035
Metabolite Identification
Common Name5-Heneicosyl-1,3-benzenediol
Description5-Heneicosyl-1,3-benzenediol belongs to the class of organic compounds known as resorcinols. Resorcinols are compounds containing a resorcinol moiety, which is a benzene ring bearing two hydroxyl groups at positions 1 and 3. 5-Heneicosyl-1,3-benzenediol is found, on average, in the highest concentration within a few different foods, such as breakfast cereal, rye bread, and hard wheats (Triticum durum) and in a lower concentration in ryes (Secale cereale), pasta, and wheat bread. 5-Heneicosyl-1,3-benzenediol has also been detected, but not quantified in, several different foods, such as rice (Oryza sativa), corns (Zea mays), soy beans (Glycine max), red rice (Oryza rufipogon), and common buckwheats (Fagopyrum esculentum). This could make 5-heneicosyl-1,3-benzenediol a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on 5-Heneicosyl-1,3-benzenediol.
Structure
Data?1563862073
Synonyms
ValueSource
5-N-HeneicosylresorcinolChEMBL, HMDB
5-HeneicosylresorcinolHMDB
Chemical FormulaC27H48O2
Average Molecular Weight404.6688
Monoisotopic Molecular Weight404.36543078
IUPAC Name5-henicosylbenzene-1,3-diol
Traditional Name5-henicosylbenzene-1,3-diol
CAS Registry Number70110-59-7
SMILES
CCCCCCCCCCCCCCCCCCCCCC1=CC(O)=CC(O)=C1
InChI Identifier
InChI=1S/C27H48O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-25-22-26(28)24-27(29)23-25/h22-24,28-29H,2-21H2,1H3
InChI KeyBLHLKJLSYHEOGY-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as resorcinols. Resorcinols are compounds containing a resorcinol moiety, which is a benzene ring bearing two hydroxyl groups at positions 1 and 3.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenols
Sub ClassBenzenediols
Direct ParentResorcinols
Alternative Parents
Substituents
  • Resorcinol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point99.5 - 100.5 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility2.0e-06 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility5.1e-05 g/LALOGPS
logP9.78ALOGPS
logP10.77ChemAxon
logS-6.9ALOGPS
pKa (Strongest Acidic)9.36ChemAxon
pKa (Strongest Basic)-5.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count20ChemAxon
Refractivity127.08 m³·mol⁻¹ChemAxon
Polarizability55.16 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+207.74731661259
DarkChem[M-H]-209.6631661259
DeepCCS[M+H]+212.1730932474
DeepCCS[M-H]-209.6230932474
DeepCCS[M-2H]-242.82330932474
DeepCCS[M+Na]+218.51330932474
AllCCS[M+H]+218.032859911
AllCCS[M+H-H2O]+215.832859911
AllCCS[M+NH4]+220.032859911
AllCCS[M+Na]+220.532859911
AllCCS[M-H]-209.732859911
AllCCS[M+Na-2H]-212.732859911
AllCCS[M+HCOO]-216.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
5-Heneicosyl-1,3-benzenediolCCCCCCCCCCCCCCCCCCCCCC1=CC(O)=CC(O)=C14214.7Standard polar33892256
5-Heneicosyl-1,3-benzenediolCCCCCCCCCCCCCCCCCCCCCC1=CC(O)=CC(O)=C13345.3Standard non polar33892256
5-Heneicosyl-1,3-benzenediolCCCCCCCCCCCCCCCCCCCCCC1=CC(O)=CC(O)=C13475.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
5-Heneicosyl-1,3-benzenediol,1TMS,isomer #1CCCCCCCCCCCCCCCCCCCCCC1=CC(O)=CC(O[Si](C)(C)C)=C13336.2Semi standard non polar33892256
5-Heneicosyl-1,3-benzenediol,2TMS,isomer #1CCCCCCCCCCCCCCCCCCCCCC1=CC(O[Si](C)(C)C)=CC(O[Si](C)(C)C)=C13318.1Semi standard non polar33892256
5-Heneicosyl-1,3-benzenediol,1TBDMS,isomer #1CCCCCCCCCCCCCCCCCCCCCC1=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C13583.4Semi standard non polar33892256
5-Heneicosyl-1,3-benzenediol,2TBDMS,isomer #1CCCCCCCCCCCCCCCCCCCCCC1=CC(O[Si](C)(C)C(C)(C)C)=CC(O[Si](C)(C)C(C)(C)C)=C13815.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 5-Heneicosyl-1,3-benzenediol GC-MS (Non-derivatized) - 70eV, Positivesplash10-00dr-3960000000-607d4efd2520776db8472017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Heneicosyl-1,3-benzenediol GC-MS (2 TMS) - 70eV, Positivesplash10-0089-9561030000-f552b857fd1b301cfc802017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Heneicosyl-1,3-benzenediol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 10V, Positive-QTOFsplash10-0a4i-0010900000-dd0e6a49de2b69581be72016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 20V, Positive-QTOFsplash10-0a59-2392200000-4cab15d4afb0d06acdea2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 40V, Positive-QTOFsplash10-052f-5392000000-5d575c884faed28da6922016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 10V, Negative-QTOFsplash10-0udi-0000900000-c420296a9b8c92ae86492016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 20V, Negative-QTOFsplash10-0udi-0001900000-f0445c0f639daf11b79e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 40V, Negative-QTOFsplash10-022i-1559000000-e48fa8123ad0cd0fd6f02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 10V, Negative-QTOFsplash10-0udi-0000900000-82ba826e352c471b5c112021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 20V, Negative-QTOFsplash10-0udi-0000900000-f9d42efb8b07ad1bd8472021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 40V, Negative-QTOFsplash10-00dr-4904000000-bd2a2a9a8cc1efba7a302021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 10V, Positive-QTOFsplash10-0a4i-1011900000-a1a6c3ffafe0b016e8882021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 20V, Positive-QTOFsplash10-0a4i-9545500000-a4068a845e057e50a2812021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Heneicosyl-1,3-benzenediol 40V, Positive-QTOFsplash10-052f-9200000000-aa30eb80510e6e9ec34f2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected and Quantified0.0175 +/- 0.00980 uMAdult (>18 years old)Female
Normal
details
BloodDetected and Quantified0.0157 uMAdult (>18 years old)Both
Normal
details
BloodDetected and Quantified0.0161 uMAdult (>18 years old)Both
Normal
details
BloodDetected and Quantified0.0169 +/- 0.00870 uMAdult (>18 years old)Female
Normal
details
BloodDetected and Quantified0.013 uMAdult (>18 years old)BothNormal details
BloodDetected and Quantified0.027 uMAdult (>18 years old)BothNormal details
BloodDetected and Quantified0.029 uMAdult (>18 years old)BothNormal details
BloodDetected and Quantified0.0173 +/- 0.00950 uMAdult (>18 years old)FemaleNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound ID691
FooDB IDFDB003029
KNApSAcK IDNot Available
Chemspider ID136952
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound155461
PDB IDNot Available
ChEBI ID1258594
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1824321
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .