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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:45:26 UTC
Update Date2022-03-07 02:53:07 UTC
HMDB IDHMDB0031784
Secondary Accession Numbers
  • HMDB31784
Metabolite Identification
Common NameHalofuginone
DescriptionVeterinary antiprotozoal agent. Poultry feed additive for prevention of coccidiosis. Halofuginone is a coccidiostat used in veterinary medicine. It is derived from dichrorine, a kind of alkaloids which can be found in the Chinese herb Chang Shan (Dichroa febrifuga). Halofuginone, a fully synthetic small molecule, is a potent and selective regulator of stromal cell activation, cell migration and Collagen type I synthesis, a process that has been identified as a 'master switch' in the body's tissue repair process
Structure
Data?1563862170
Synonyms
ValueSource
7-Bromo-6-chloro-3-[3-(3-hydroxy-2-piperidinyl)-2-oxopropyl]-4(3H)-quinazolinone, 9ciHMDB
C16H17BRCLN3O3HMDB
HalofuginonaHMDB
HalofuginonumHMDB
7-Bromo-6-chlorofebrifugineHMDB
StenorolHMDB
HalofunginoneHMDB
HalofuginoneMeSH
Chemical FormulaC16H17BrClN3O3
Average Molecular Weight414.681
Monoisotopic Molecular Weight413.014181779
IUPAC Name7-bromo-6-chloro-3-[3-(3-hydroxypiperidin-2-yl)-2-oxopropyl]-3,4-dihydroquinazolin-4-one
Traditional Name7-bromo-6-chloro-3-[3-(3-hydroxypiperidin-2-yl)-2-oxopropyl]quinazolin-4-one
CAS Registry Number55837-20-2
SMILES
OC1CCCNC1CC(=O)CN1C=NC2=C(C=C(Cl)C(Br)=C2)C1=O
InChI Identifier
InChI=1S/C16H17BrClN3O3/c17-11-6-13-10(5-12(11)18)16(24)21(8-20-13)7-9(22)4-14-15(23)2-1-3-19-14/h5-6,8,14-15,19,23H,1-4,7H2
InChI KeyLVASCWIMLIKXLA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as quinazolines. Quinazolines are compounds containing a quinazoline moiety, which is made up of two fused six-member aromatic rings, a benzene ring and a pyrimidine ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassDiazanaphthalenes
Sub ClassBenzodiazines
Direct ParentQuinazolines
Alternative Parents
Substituents
  • Quinazoline
  • Pyrimidone
  • Aryl bromide
  • Aryl chloride
  • Aryl halide
  • Beta-aminoketone
  • Benzenoid
  • Pyrimidine
  • Piperidine
  • Heteroaromatic compound
  • 1,2-aminoalcohol
  • Ketone
  • Lactam
  • Secondary alcohol
  • Secondary aliphatic amine
  • Azacycle
  • Secondary amine
  • Organobromide
  • Organohalogen compound
  • Amine
  • Alcohol
  • Organic nitrogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organochloride
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.11 g/LALOGPS
logP1.38ALOGPS
logP1.71ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)14.48ChemAxon
pKa (Strongest Basic)9.28ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area82 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity95.87 m³·mol⁻¹ChemAxon
Polarizability36.21 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+179.61730932474
DeepCCS[M-H]-177.25930932474
DeepCCS[M-2H]-210.14430932474
DeepCCS[M+Na]+185.91530932474
AllCCS[M+H]+186.432859911
AllCCS[M+H-H2O]+183.732859911
AllCCS[M+NH4]+188.832859911
AllCCS[M+Na]+189.532859911
AllCCS[M-H]-185.132859911
AllCCS[M+Na-2H]-185.532859911
AllCCS[M+HCOO]-186.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
HalofuginoneOC1CCCNC1CC(=O)CN1C=NC2=C(C=C(Cl)C(Br)=C2)C1=O4006.9Standard polar33892256
HalofuginoneOC1CCCNC1CC(=O)CN1C=NC2=C(C=C(Cl)C(Br)=C2)C1=O2820.0Standard non polar33892256
HalofuginoneOC1CCCNC1CC(=O)CN1C=NC2=C(C=C(Cl)C(Br)=C2)C1=O3420.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Halofuginone,1TMS,isomer #1C[Si](C)(C)OC1CCCNC1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3324.0Semi standard non polar33892256
Halofuginone,1TMS,isomer #2C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1NCCCC1O3456.6Semi standard non polar33892256
Halofuginone,1TMS,isomer #3C[Si](C)(C)OC(=CC1NCCCC1O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3389.9Semi standard non polar33892256
Halofuginone,1TMS,isomer #4C[Si](C)(C)N1CCCC(O)C1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3339.1Semi standard non polar33892256
Halofuginone,2TMS,isomer #1C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1NCCCC1O[Si](C)(C)C3333.0Semi standard non polar33892256
Halofuginone,2TMS,isomer #1C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1NCCCC1O[Si](C)(C)C3164.8Standard non polar33892256
Halofuginone,2TMS,isomer #2C[Si](C)(C)OC(=CC1NCCCC1O[Si](C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3282.4Semi standard non polar33892256
Halofuginone,2TMS,isomer #2C[Si](C)(C)OC(=CC1NCCCC1O[Si](C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3173.4Standard non polar33892256
Halofuginone,2TMS,isomer #3C[Si](C)(C)OC1CCCN([Si](C)(C)C)C1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3246.7Semi standard non polar33892256
Halofuginone,2TMS,isomer #3C[Si](C)(C)OC1CCCN([Si](C)(C)C)C1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3282.5Standard non polar33892256
Halofuginone,2TMS,isomer #4C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O)CCCN1[Si](C)(C)C3338.2Semi standard non polar33892256
Halofuginone,2TMS,isomer #4C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O)CCCN1[Si](C)(C)C3340.0Standard non polar33892256
Halofuginone,2TMS,isomer #5C[Si](C)(C)OC(=CC1C(O)CCCN1[Si](C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3308.7Semi standard non polar33892256
Halofuginone,2TMS,isomer #5C[Si](C)(C)OC(=CC1C(O)CCCN1[Si](C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3312.3Standard non polar33892256
Halofuginone,3TMS,isomer #1C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O[Si](C)(C)C)CCCN1[Si](C)(C)C3276.0Semi standard non polar33892256
Halofuginone,3TMS,isomer #1C[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O[Si](C)(C)C)CCCN1[Si](C)(C)C3319.4Standard non polar33892256
Halofuginone,3TMS,isomer #2C[Si](C)(C)OC(=CC1C(O[Si](C)(C)C)CCCN1[Si](C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3270.3Semi standard non polar33892256
Halofuginone,3TMS,isomer #2C[Si](C)(C)OC(=CC1C(O[Si](C)(C)C)CCCN1[Si](C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3300.2Standard non polar33892256
Halofuginone,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1CCCNC1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3536.2Semi standard non polar33892256
Halofuginone,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1NCCCC1O3676.1Semi standard non polar33892256
Halofuginone,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=CC1NCCCC1O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3619.5Semi standard non polar33892256
Halofuginone,1TBDMS,isomer #4CC(C)(C)[Si](C)(C)N1CCCC(O)C1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3599.6Semi standard non polar33892256
Halofuginone,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1NCCCC1O[Si](C)(C)C(C)(C)C3808.7Semi standard non polar33892256
Halofuginone,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1NCCCC1O[Si](C)(C)C(C)(C)C3577.2Standard non polar33892256
Halofuginone,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=CC1NCCCC1O[Si](C)(C)C(C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3771.7Semi standard non polar33892256
Halofuginone,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=CC1NCCCC1O[Si](C)(C)C(C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3585.4Standard non polar33892256
Halofuginone,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1CCCN([Si](C)(C)C(C)(C)C)C1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3729.3Semi standard non polar33892256
Halofuginone,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1CCCN([Si](C)(C)C(C)(C)C)C1CC(=O)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3687.7Standard non polar33892256
Halofuginone,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O)CCCN1[Si](C)(C)C(C)(C)C3842.0Semi standard non polar33892256
Halofuginone,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O)CCCN1[Si](C)(C)C(C)(C)C3720.2Standard non polar33892256
Halofuginone,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC(=CC1C(O)CCCN1[Si](C)(C)C(C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3795.0Semi standard non polar33892256
Halofuginone,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC(=CC1C(O)CCCN1[Si](C)(C)C(C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3691.8Standard non polar33892256
Halofuginone,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O[Si](C)(C)C(C)(C)C)CCCN1[Si](C)(C)C(C)(C)C4022.4Semi standard non polar33892256
Halofuginone,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O)CC1C(O[Si](C)(C)C(C)(C)C)CCCN1[Si](C)(C)C(C)(C)C3865.5Standard non polar33892256
Halofuginone,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=CC1C(O[Si](C)(C)C(C)(C)C)CCCN1[Si](C)(C)C(C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3984.5Semi standard non polar33892256
Halofuginone,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=CC1C(O[Si](C)(C)C(C)(C)C)CCCN1[Si](C)(C)C(C)(C)C)CN1C=NC2=CC(Br)=C(Cl)C=C2C1=O3848.9Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Halofuginone GC-MS (Non-derivatized) - 70eV, Positivesplash10-00dl-9531000000-ad6d23d97b7b8b8024562017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Halofuginone GC-MS (1 TMS) - 70eV, Positivesplash10-00di-9772100000-33f767c26405baf989d52017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Halofuginone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Halofuginone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 10V, Positive-QTOFsplash10-01ot-0019400000-ef37bff5ad2e7944f6582016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 20V, Positive-QTOFsplash10-0032-4229100000-9dcac476806bf59275f42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 40V, Positive-QTOFsplash10-0a59-2091000000-5bf157bd94019fecfb6d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 10V, Negative-QTOFsplash10-03di-0023900000-140a33008401d00129842016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 20V, Negative-QTOFsplash10-0bt9-5095200000-5d19f101c04a8000ea812016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 40V, Negative-QTOFsplash10-056r-1190000000-45f00a76c454d6ef5d312016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 10V, Positive-QTOFsplash10-0002-0009300000-7afba3c2c7d0c13e01592021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 20V, Positive-QTOFsplash10-022a-0149300000-66b7f003bd06aa7178232021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 40V, Positive-QTOFsplash10-00ea-5093000000-0c47978e630a5c91d73e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 10V, Negative-QTOFsplash10-03dl-0046900000-b271a5f6055f2a12bc422021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 20V, Negative-QTOFsplash10-0006-0139000000-08906f28b7da88fd8c642021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Halofuginone 40V, Negative-QTOFsplash10-0a4l-2190100000-7cf63cdf29574b0ee2a02021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008457
KNApSAcK IDNot Available
Chemspider ID56619
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkHalofuginone
METLIN IDNot Available
PubChem Compound62894
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Elkin M, Miao HQ, Nagler A, Aingorn E, Reich R, Hemo I, Dou HL, Pines M, Vlodavsky I: Halofuginone: a potent inhibitor of critical steps in angiogenesis progression. FASEB J. 2000 Dec;14(15):2477-85. [PubMed:11099465 ]
  2. Karakoyun B, Yuksel M, Ercan F, Salva E, Isik I, Yegen BC: Halofuginone, a specific inhibitor of collagen type 1 synthesis, ameliorates oxidant colonic damage in rats with experimental colitis. Dig Dis Sci. 2010 Mar;55(3):607-16. doi: 10.1007/s10620-009-0798-0. Epub 2009 Apr 24. [PubMed:19390970 ]
  3. McLaughlin NP, Evans P: Dihydroxylation of vinyl sulfones: stereoselective synthesis of (+)- and (-)-febrifugine and halofuginone. J Org Chem. 2010 Jan 15;75(2):518-21. doi: 10.1021/jo902396m. [PubMed:20000346 ]
  4. Nagler A, Katz A, Aingorn H, Miao HQ, Condiotti R, Genina O, Pines M, Vlodavsky I: Inhibition of glomerular mesangial cell proliferation and extracellular matrix deposition by halofuginone. Kidney Int. 1997 Dec;52(6):1561-9. [PubMed:9407501 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Involved in extracellular matrix structural constituent
Specific function:
Type I collagen is a member of group I collagen (fibrillar forming collagen)
Gene Name:
COL1A1
Uniprot ID:
P02452
Molecular weight:
138941.1
References
  1. Elkin M, Miao HQ, Nagler A, Aingorn E, Reich R, Hemo I, Dou HL, Pines M, Vlodavsky I: Halofuginone: a potent inhibitor of critical steps in angiogenesis progression. FASEB J. 2000 Dec;14(15):2477-85. [PubMed:11099465 ]
General function:
Involved in metalloendopeptidase activity
Specific function:
PEX, the C-terminal non-catalytic fragment of MMP2, posseses anti-angiogenic and anti-tumor properties and inhibits cell migration and cell adhesion to FGF2 and vitronectin. Ligand for integrinv/beta3 on the surface of blood vessels
Gene Name:
MMP2
Uniprot ID:
P08253
Molecular weight:
73881.7
References
  1. Elkin M, Miao HQ, Nagler A, Aingorn E, Reich R, Hemo I, Dou HL, Pines M, Vlodavsky I: Halofuginone: a potent inhibitor of critical steps in angiogenesis progression. FASEB J. 2000 Dec;14(15):2477-85. [PubMed:11099465 ]