Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:48:00 UTC
Update Date2022-03-07 02:53:15 UTC
HMDB IDHMDB0032126
Secondary Accession Numbers
  • HMDB32126
Metabolite Identification
Common Namezeta-Carotene epoxide
Descriptionzeta-Carotene epoxide belongs to the class of organic compounds known as sesquaterpenoids. These are terpenoids with at least 7 consecutive isoprene units. Based on a literature review a small amount of articles have been published on zeta-Carotene epoxide.
Structure
Data?1563862223
Synonyms
ValueSource
Z-Carotene epoxideGenerator
Ζ-carotene epoxideGenerator
1,2-Epoxy-1,2-dihydro-Z-caroteneHMDB
Chemical FormulaC40H60O
Average Molecular Weight556.9038
Monoisotopic Molecular Weight556.464416542
IUPAC Name3-[(3Z,7Z,9E,11E,13E,15E,17Z,19E,23Z)-3,7,11,16,20,24,28-heptamethylnonacosa-3,7,9,11,13,15,17,19,23,27-decaen-1-yl]-2,2-dimethyloxirane
Traditional Name3-[(3Z,7Z,9E,11E,13E,15E,17Z,19E,23Z)-3,7,11,16,20,24,28-heptamethylnonacosa-3,7,9,11,13,15,17,19,23,27-decaen-1-yl]-2,2-dimethyloxirane
CAS Registry Number93861-35-9
SMILES
CC(C)=CCC\C(C)=C/CC\C(C)=C\C=C/C(/C)=C/C=C/C=C(\C)/C=C/C=C(/C)CC\C=C(\C)CCC1OC1(C)C
InChI Identifier
InChI=1S/C40H60O/c1-32(2)18-13-21-35(5)24-16-27-36(6)25-14-22-33(3)19-11-12-20-34(4)23-15-26-37(7)28-17-29-38(8)30-31-39-40(9,10)41-39/h11-12,14-15,18-20,22-26,29,39H,13,16-17,21,27-28,30-31H2,1-10H3/b12-11+,22-14-,23-15+,33-19+,34-20+,35-24-,36-25+,37-26-,38-29-
InChI KeyWQKGZVZKMBRSEI-KSUSXTEYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesquaterpenoids. These are terpenoids with at least 7 consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquaterpenoids
Direct ParentSesquaterpenoids
Alternative Parents
Substituents
  • Sesquaterpenoid
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Oxirane
  • Dialkyl ether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility1.8e-12 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00028 g/LALOGPS
logP9.55ALOGPS
logP11.68ChemAxon
logS-6.3ALOGPS
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area12.53 ŲChemAxon
Rotatable Bond Count18ChemAxon
Refractivity194.41 m³·mol⁻¹ChemAxon
Polarizability73.03 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+242.41431661259
DarkChem[M-H]-238.95631661259
DeepCCS[M+H]+251.56930932474
DeepCCS[M-H]-249.46730932474
DeepCCS[M-2H]-282.70830932474
DeepCCS[M+Na]+257.37430932474
AllCCS[M+H]+251.932859911
AllCCS[M+H-H2O]+250.432859911
AllCCS[M+NH4]+253.332859911
AllCCS[M+Na]+253.732859911
AllCCS[M-H]-224.532859911
AllCCS[M+Na-2H]-228.132859911
AllCCS[M+HCOO]-232.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
zeta-Carotene epoxideCC(C)=CCC\C(C)=C/CC\C(C)=C\C=C/C(/C)=C/C=C/C=C(\C)/C=C/C=C(/C)CC\C=C(\C)CCC1OC1(C)C4930.9Standard polar33892256
zeta-Carotene epoxideCC(C)=CCC\C(C)=C/CC\C(C)=C\C=C/C(/C)=C/C=C/C=C(\C)/C=C/C=C(/C)CC\C=C(\C)CCC1OC1(C)C4122.3Standard non polar33892256
zeta-Carotene epoxideCC(C)=CCC\C(C)=C/CC\C(C)=C\C=C/C(/C)=C/C=C/C=C(\C)/C=C/C=C(/C)CC\C=C(\C)CCC1OC1(C)C4048.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - zeta-Carotene epoxide GC-MS (Non-derivatized) - 70eV, Positivesplash10-006x-3400940000-f1f3c9c514da96598aac2017-09-01Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 10V, Positive-QTOFsplash10-0a4i-0332190000-5a001dad4a391c1d24822016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 20V, Positive-QTOFsplash10-0002-2234910000-48f1fe4503b498ccc22e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 40V, Positive-QTOFsplash10-0uy3-6454910000-6dd0ef46727a24ccf94f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 10V, Negative-QTOFsplash10-0a4i-0000090000-859a0f9dc688a429274b2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 20V, Negative-QTOFsplash10-0a4i-2000090000-cbf59f1654b1d3ac14dc2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 40V, Negative-QTOFsplash10-0abi-9110270000-c7c3317b4c1bcc10f0802016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 10V, Positive-QTOFsplash10-0ap1-1043590000-c8021c16e342928c02aa2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 20V, Positive-QTOFsplash10-0002-1000940000-27588d81f3ef616046702021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 40V, Positive-QTOFsplash10-007o-2322910000-83b9b8944703a0efc9de2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 10V, Negative-QTOFsplash10-0a4i-0021090000-72a023ee4737a4b81e512021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 20V, Negative-QTOFsplash10-0a4i-0133190000-13089dcb419d7de424ce2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - zeta-Carotene epoxide 40V, Negative-QTOFsplash10-00vr-1403910000-9333b10aac2dcf2cf0e02021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008849
KNApSAcK IDC00054359
Chemspider ID35013453
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751261
PDB IDNot Available
ChEBI ID172135
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1829891
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.