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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:51:40 UTC
Update Date2022-03-07 02:53:28 UTC
HMDB IDHMDB0032769
Secondary Accession Numbers
  • HMDB32769
Metabolite Identification
Common NameOsmaronin
DescriptionOsmaronin belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. Based on a literature review a small amount of articles have been published on Osmaronin.
Structure
Data?1563862304
SynonymsNot Available
Chemical FormulaC11H17NO6
Average Molecular Weight259.2558
Monoisotopic Molecular Weight259.105587281
IUPAC Name(2E)-3-methyl-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}but-2-enenitrile
Traditional Name(2E)-3-methyl-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}but-2-enenitrile
CAS Registry Number160551-60-0
SMILES
C\C(COC1OC(CO)C(O)C(O)C1O)=C/C#N
InChI Identifier
InChI=1S/C11H17NO6/c1-6(2-3-12)5-17-11-10(16)9(15)8(14)7(4-13)18-11/h2,7-11,13-16H,4-5H2,1H3/b6-2+
InChI KeyDAVUWBZDLSJMFA-QHHAFSJGSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acyl glycosides
Direct ParentFatty acyl glycosides of mono- and disaccharides
Alternative Parents
Substituents
  • Fatty acyl glycoside of mono- or disaccharide
  • Alkyl glycoside
  • Hexose monosaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Monosaccharide
  • Oxane
  • Secondary alcohol
  • Polyol
  • Acetal
  • Organoheterocyclic compound
  • Nitrile
  • Carbonitrile
  • Oxacycle
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Alcohol
  • Primary alcohol
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility809600 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility41.3 g/LALOGPS
logP-1ALOGPS
logP-1.7ChemAxon
logS-0.8ALOGPS
pKa (Strongest Acidic)12.21ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area123.17 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity60.41 m³·mol⁻¹ChemAxon
Polarizability25.63 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+161.24431661259
DarkChem[M-H]-154.65431661259
DeepCCS[M+H]+167.44730932474
DeepCCS[M-H]-165.07630932474
DeepCCS[M-2H]-198.35630932474
DeepCCS[M+Na]+174.28430932474
AllCCS[M+H]+160.032859911
AllCCS[M+H-H2O]+156.632859911
AllCCS[M+NH4]+163.232859911
AllCCS[M+Na]+164.132859911
AllCCS[M-H]-158.332859911
AllCCS[M+Na-2H]-158.632859911
AllCCS[M+HCOO]-159.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
OsmaroninC\C(COC1OC(CO)C(O)C(O)C1O)=C/C#N3364.7Standard polar33892256
OsmaroninC\C(COC1OC(CO)C(O)C(O)C1O)=C/C#N2178.4Standard non polar33892256
OsmaroninC\C(COC1OC(CO)C(O)C(O)C1O)=C/C#N2371.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Osmaronin,1TMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O)C(O)C1O2367.1Semi standard non polar33892256
Osmaronin,1TMS,isomer #2C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C)C(O)C1O2337.2Semi standard non polar33892256
Osmaronin,1TMS,isomer #3C/C(=C\C#N)COC1OC(CO)C(O)C(O[Si](C)(C)C)C1O2337.5Semi standard non polar33892256
Osmaronin,1TMS,isomer #4C/C(=C\C#N)COC1OC(CO)C(O)C(O)C1O[Si](C)(C)C2341.4Semi standard non polar33892256
Osmaronin,2TMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C1O2373.1Semi standard non polar33892256
Osmaronin,2TMS,isomer #2C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C1O2367.1Semi standard non polar33892256
Osmaronin,2TMS,isomer #3C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O)C(O)C1O[Si](C)(C)C2375.0Semi standard non polar33892256
Osmaronin,2TMS,isomer #4C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2342.0Semi standard non polar33892256
Osmaronin,2TMS,isomer #5C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2350.4Semi standard non polar33892256
Osmaronin,2TMS,isomer #6C/C(=C\C#N)COC1OC(CO)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C2347.5Semi standard non polar33892256
Osmaronin,3TMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2376.8Semi standard non polar33892256
Osmaronin,3TMS,isomer #2C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2394.7Semi standard non polar33892256
Osmaronin,3TMS,isomer #3C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C2375.6Semi standard non polar33892256
Osmaronin,3TMS,isomer #4C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2363.6Semi standard non polar33892256
Osmaronin,4TMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2421.4Semi standard non polar33892256
Osmaronin,1TBDMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C1O2606.3Semi standard non polar33892256
Osmaronin,1TBDMS,isomer #2C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C1O2583.0Semi standard non polar33892256
Osmaronin,1TBDMS,isomer #3C/C(=C\C#N)COC1OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C1O2578.4Semi standard non polar33892256
Osmaronin,1TBDMS,isomer #4C/C(=C\C#N)COC1OC(CO)C(O)C(O)C1O[Si](C)(C)C(C)(C)C2589.2Semi standard non polar33892256
Osmaronin,2TBDMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C1O2805.2Semi standard non polar33892256
Osmaronin,2TBDMS,isomer #2C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C1O2795.1Semi standard non polar33892256
Osmaronin,2TBDMS,isomer #3C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C1O[Si](C)(C)C(C)(C)C2805.3Semi standard non polar33892256
Osmaronin,2TBDMS,isomer #4C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O2799.1Semi standard non polar33892256
Osmaronin,2TBDMS,isomer #5C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C2804.3Semi standard non polar33892256
Osmaronin,2TBDMS,isomer #6C/C(=C\C#N)COC1OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2806.6Semi standard non polar33892256
Osmaronin,3TBDMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O2992.2Semi standard non polar33892256
Osmaronin,3TBDMS,isomer #2C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C3015.2Semi standard non polar33892256
Osmaronin,3TBDMS,isomer #3C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2988.2Semi standard non polar33892256
Osmaronin,3TBDMS,isomer #4C/C(=C\C#N)COC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2996.8Semi standard non polar33892256
Osmaronin,4TBDMS,isomer #1C/C(=C\C#N)COC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C3212.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Osmaronin GC-MS (Non-derivatized) - 70eV, Positivesplash10-00kf-8940000000-e3678bd4ff47b3435d282017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Osmaronin GC-MS (4 TMS) - 70eV, Positivesplash10-001i-5111690000-a3b1147fe978e12391462017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Osmaronin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Osmaronin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 10V, Positive-QTOFsplash10-03dl-2190000000-f8da8ab0f2c8d75e381e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 20V, Positive-QTOFsplash10-001m-9130000000-6054039d65ea43a7093d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 40V, Positive-QTOFsplash10-0005-9200000000-7e113c59eb71cfe9aad22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 10V, Negative-QTOFsplash10-0a4i-3390000000-01cbdbbd0e8d346bf7d42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 20V, Negative-QTOFsplash10-06xw-9540000000-985917c30e9168ec25b12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 40V, Negative-QTOFsplash10-052g-9100000000-6a3fc2d43b79ca5362de2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 10V, Negative-QTOFsplash10-0a4i-5690000000-e3370ef501bf1e742a722021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 20V, Negative-QTOFsplash10-07vi-9110000000-afdfb80f304312a75cb62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 40V, Negative-QTOFsplash10-07vi-9000000000-45f2ff5716673b7c161a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 10V, Positive-QTOFsplash10-03di-0490000000-66eda31878a7cb2caf272021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 20V, Positive-QTOFsplash10-001i-9210000000-60050a663c0fe91a8e692021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Osmaronin 40V, Positive-QTOFsplash10-001i-9000000000-29aeb61b06c23d857a992021-09-24Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB010737
KNApSAcK IDC00057121
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14559842
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1831441
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.