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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:54:14 UTC
Update Date2022-03-07 02:53:37 UTC
HMDB IDHMDB0033185
Secondary Accession Numbers
  • HMDB33185
Metabolite Identification
Common NameAnigorootin
DescriptionAnigorootin belongs to the class of organic compounds known as isoflavans. These are polycyclic compounds with a structure based on the 3-phenyl-3,4-dihydro-2H-1-benzopyran skeleton. Anigorootin is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, anigorootin has been detected, but not quantified in, fruits. This could make anigorootin a potential biomarker for the consumption of these foods.
Structure
Data?1563862364
Synonyms
ValueSource
AnigorootinMeSH
Chemical FormulaC38H22O6
Average Molecular Weight574.5777
Monoisotopic Molecular Weight574.141638436
IUPAC Name1,14-dihydroxy-9,22-diphenyl-2,15-dioxaoctacyclo[21.3.1.1¹⁰,¹⁴.0³,¹².0⁶,¹¹.0¹³,²⁶.0¹⁶,²⁵.0¹⁹,²⁴]octacosa-3(12),4,6(11),7,9,16(25),17,19(24),20,22-decaene-27,28-dione
Traditional Name1,14-dihydroxy-9,22-diphenyl-2,15-dioxaoctacyclo[21.3.1.1¹⁰,¹⁴.0³,¹².0⁶,¹¹.0¹³,²⁶.0¹⁶,²⁵.0¹⁹,²⁴]octacosa-3(12),4,6(11),7,9,16(25),17,19(24),20,22-decaene-27,28-dione
CAS Registry Number221287-38-3
SMILES
OC12OC3=C4C5C1C1=C(OC5(O)C(=O)C5=C(C=CC(C=C3)=C45)C3=CC=CC=C3)C=CC3=C1C(C2=O)=C(C=C3)C1=CC=CC=C1
InChI Identifier
InChI=1S/C38H22O6/c39-35-29-23(19-7-3-1-4-8-19)15-11-21-13-17-25-31(27(21)29)33-34-32-26(43-37(33,35)41)18-14-22-12-16-24(20-9-5-2-6-10-20)30(28(22)32)36(40)38(34,42)44-25/h1-18,33-34,41-42H
InChI KeyYOXXPZVESHZYHK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoflavans. These are polycyclic compounds with a structure based on the 3-phenyl-3,4-dihydro-2H-1-benzopyran skeleton.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassIsoflavans
Direct ParentIsoflavans
Alternative Parents
Substituents
  • Isoflavan
  • Phenylnaphthalene
  • Naphthopyranone
  • Dibenzopyran
  • Xanthene
  • Naphthopyran
  • Phenalane
  • Chromane
  • Benzopyran
  • Naphthalene
  • 1-benzopyran
  • Aryl alkyl ketone
  • Aryl ketone
  • Pyranone
  • Benzenoid
  • Pyran
  • Monocyclic benzene moiety
  • Ketone
  • Hemiacetal
  • Organoheterocyclic compound
  • Oxacycle
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00037 g/LALOGPS
logP5.44ALOGPS
logP7ChemAxon
logS-6.2ALOGPS
pKa (Strongest Acidic)9.4ChemAxon
pKa (Strongest Basic)-4.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area93.06 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity163.15 m³·mol⁻¹ChemAxon
Polarizability60.91 ųChemAxon
Number of Rings10ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+228.63631661259
DarkChem[M-H]-221.93831661259
DeepCCS[M-2H]-277.07630932474
DeepCCS[M+Na]+251.65130932474
AllCCS[M+H]+244.532859911
AllCCS[M+H-H2O]+243.032859911
AllCCS[M+NH4]+245.932859911
AllCCS[M+Na]+246.332859911
AllCCS[M-H]-213.932859911
AllCCS[M+Na-2H]-214.532859911
AllCCS[M+HCOO]-215.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
AnigorootinOC12OC3=C4C5C1C1=C(OC5(O)C(=O)C5=C(C=CC(C=C3)=C45)C3=CC=CC=C3)C=CC3=C1C(C2=O)=C(C=C3)C1=CC=CC=C16880.3Standard polar33892256
AnigorootinOC12OC3=C4C5C1C1=C(OC5(O)C(=O)C5=C(C=CC(C=C3)=C45)C3=CC=CC=C3)C=CC3=C1C(C2=O)=C(C=C3)C1=CC=CC=C14867.9Standard non polar33892256
AnigorootinOC12OC3=C4C5C1C1=C(OC5(O)C(=O)C5=C(C=CC(C=C3)=C45)C3=CC=CC=C3)C=CC3=C1C(C2=O)=C(C=C3)C1=CC=CC=C15374.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Anigorootin,1TMS,isomer #1C[Si](C)(C)OC12OC3=CC=C4C=CC(C5=CC=CC=C5)=C5C(=O)C6(O)OC7=C(C8=C(C1=O)C(C1=CC=CC=C1)=CC=C8C=C7)C2C6C3=C545305.9Semi standard non polar33892256
Anigorootin,2TMS,isomer #1C[Si](C)(C)OC12OC3=CC=C4C=CC(C5=CC=CC=C5)=C5C(=O)C6(O[Si](C)(C)C)OC7=C(C8=C(C1=O)C(C1=CC=CC=C1)=CC=C8C=C7)C2C6C3=C545146.6Semi standard non polar33892256
Anigorootin,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC12OC3=CC=C4C=CC(C5=CC=CC=C5)=C5C(=O)C6(O)OC7=C(C8=C(C1=O)C(C1=CC=CC=C1)=CC=C8C=C7)C2C6C3=C545487.7Semi standard non polar33892256
Anigorootin,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC12OC3=CC=C4C=CC(C5=CC=CC=C5)=C5C(=O)C6(O[Si](C)(C)C(C)(C)C)OC7=C(C8=C(C1=O)C(C1=CC=CC=C1)=CC=C8C=C7)C2C6C3=C545430.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Anigorootin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ab9-0000090000-7cfd702ad47a7a104c502017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Anigorootin GC-MS (1 TMS) - 70eV, Positivesplash10-00dr-9000002000-cdb8c67a95ac1f35a2cc2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Anigorootin GC-MS ("Anigorootin,1TMS,#1" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Anigorootin GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Anigorootin GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Anigorootin GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 10V, Positive-QTOFsplash10-004i-0000090000-2899aaacd41ed025374a2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 20V, Positive-QTOFsplash10-004i-0000290000-0327a89b54a011a16fce2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 40V, Positive-QTOFsplash10-0a6s-1100490000-6295234bdf47ee2e4a252015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 10V, Negative-QTOFsplash10-00di-0000090000-1e706f3545b7e7bb6d892015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 20V, Negative-QTOFsplash10-00di-0000090000-5af126a008b762eee37a2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 40V, Negative-QTOFsplash10-05bg-1000190000-81610eaf9bfad4b877092015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 10V, Negative-QTOFsplash10-00di-0000090000-6ea6cefbaf00d6a106ba2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 20V, Negative-QTOFsplash10-00di-0000090000-47f9f8e4bf2c764a73532021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 40V, Negative-QTOFsplash10-00di-0000090000-68864ae8d896a12bca852021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 10V, Positive-QTOFsplash10-004i-0000090000-5a8cd4c2c4c2d8fc31932021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 20V, Positive-QTOFsplash10-056r-0000090000-8fdbc546dbf852981cf02021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Anigorootin 40V, Positive-QTOFsplash10-004j-0000090000-1986c3daec128e7c85842021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011196
KNApSAcK IDC00036728
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound78200663
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .