Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:56:48 UTC
Update Date2022-03-07 02:53:38 UTC
HMDB IDHMDB0033233
Secondary Accession Numbers
  • HMDB33233
Metabolite Identification
Common NameLucidumol A
DescriptionLucidumol A belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Lucidumol A is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862373
Synonyms
ValueSource
(+)-Lucidumol aHMDB
24,25-Dihydroxy-(24S)-lanost-8-ene-3,7-dioneHMDB
Chemical FormulaC30H48O4
Average Molecular Weight472.6997
Monoisotopic Molecular Weight472.355260024
IUPAC Name14-(5,6-dihydroxy-6-methylheptan-2-yl)-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-ene-5,9-dione
Traditional Name14-(5,6-dihydroxy-6-methylheptan-2-yl)-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-ene-5,9-dione
CAS Registry Number217476-73-8
SMILES
CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O
InChI Identifier
InChI=1S/C30H48O4/c1-18(9-10-24(33)27(4,5)34)19-11-16-30(8)25-20(12-15-29(19,30)7)28(6)14-13-23(32)26(2,3)22(28)17-21(25)31/h18-19,22,24,33-34H,9-17H2,1-8H3
InChI KeyLVGCWXNRZNCAJG-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • 25-hydroxysteroid
  • Dihydroxy bile acid, alcohol, or derivatives
  • 24-hydroxysteroid
  • Hydroxy bile acid, alcohol, or derivatives
  • Bile acid, alcohol, or derivatives
  • 3-oxosteroid
  • 7-oxosteroid
  • Oxosteroid
  • Steroid
  • Cyclohexenone
  • Tertiary alcohol
  • 1,2-diol
  • Cyclic ketone
  • Secondary alcohol
  • Ketone
  • Organic oxygen compound
  • Organooxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Alcohol
  • Organic oxide
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point185 - 187 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.003 g/LALOGPS
logP5.49ALOGPS
logP5.46ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)13.85ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area74.6 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity136.76 m³·mol⁻¹ChemAxon
Polarizability56.51 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+208.68531661259
DarkChem[M-H]-203.0831661259
DeepCCS[M-2H]-246.24630932474
DeepCCS[M+Na]+221.75830932474
AllCCS[M+H]+216.132859911
AllCCS[M+H-H2O]+214.432859911
AllCCS[M+NH4]+217.632859911
AllCCS[M+Na]+218.032859911
AllCCS[M-H]-216.332859911
AllCCS[M+Na-2H]-218.932859911
AllCCS[M+HCOO]-222.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Lucidumol ACC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O4507.6Standard polar33892256
Lucidumol ACC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O3562.9Standard non polar33892256
Lucidumol ACC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O3922.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Lucidumol A,1TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O3841.6Semi standard non polar33892256
Lucidumol A,1TMS,isomer #2CC(CCC(O)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O3862.6Semi standard non polar33892256
Lucidumol A,1TMS,isomer #3CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3=O3731.2Semi standard non polar33892256
Lucidumol A,1TMS,isomer #4CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C3722.2Semi standard non polar33892256
Lucidumol A,2TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O3929.8Semi standard non polar33892256
Lucidumol A,2TMS,isomer #2CC(CCC(O[Si](C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3=O3732.3Semi standard non polar33892256
Lucidumol A,2TMS,isomer #3CC(CCC(O[Si](C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C3725.1Semi standard non polar33892256
Lucidumol A,2TMS,isomer #4CC(CCC(O)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3=O3783.0Semi standard non polar33892256
Lucidumol A,2TMS,isomer #5CC(CCC(O)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C3774.8Semi standard non polar33892256
Lucidumol A,2TMS,isomer #6CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3595.9Semi standard non polar33892256
Lucidumol A,3TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3=O3834.9Semi standard non polar33892256
Lucidumol A,3TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3=O3582.8Standard non polar33892256
Lucidumol A,3TMS,isomer #2CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C3803.4Semi standard non polar33892256
Lucidumol A,3TMS,isomer #2CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C3667.8Standard non polar33892256
Lucidumol A,3TMS,isomer #3CC(CCC(O[Si](C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3582.4Semi standard non polar33892256
Lucidumol A,3TMS,isomer #3CC(CCC(O[Si](C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3491.8Standard non polar33892256
Lucidumol A,3TMS,isomer #4CC(CCC(O)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3633.0Semi standard non polar33892256
Lucidumol A,3TMS,isomer #4CC(CCC(O)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3537.7Standard non polar33892256
Lucidumol A,4TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3639.8Semi standard non polar33892256
Lucidumol A,4TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(C)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C3588.0Standard non polar33892256
Lucidumol A,1TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O4067.8Semi standard non polar33892256
Lucidumol A,1TBDMS,isomer #2CC(CCC(O)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O4078.4Semi standard non polar33892256
Lucidumol A,1TBDMS,isomer #3CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3=O3955.1Semi standard non polar33892256
Lucidumol A,1TBDMS,isomer #4CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C3954.4Semi standard non polar33892256
Lucidumol A,2TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1CC3=O4359.1Semi standard non polar33892256
Lucidumol A,2TBDMS,isomer #2CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3=O4190.7Semi standard non polar33892256
Lucidumol A,2TBDMS,isomer #3CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4154.8Semi standard non polar33892256
Lucidumol A,2TBDMS,isomer #4CC(CCC(O)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3=O4229.3Semi standard non polar33892256
Lucidumol A,2TBDMS,isomer #5CC(CCC(O)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4197.8Semi standard non polar33892256
Lucidumol A,2TBDMS,isomer #6CC(CCC(O)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4029.6Semi standard non polar33892256
Lucidumol A,3TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3=O4489.6Semi standard non polar33892256
Lucidumol A,3TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3=O4134.3Standard non polar33892256
Lucidumol A,3TBDMS,isomer #2CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4441.4Semi standard non polar33892256
Lucidumol A,3TBDMS,isomer #2CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(=O)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4278.6Standard non polar33892256
Lucidumol A,3TBDMS,isomer #3CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4225.7Semi standard non polar33892256
Lucidumol A,3TBDMS,isomer #3CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)O)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C3991.0Standard non polar33892256
Lucidumol A,3TBDMS,isomer #4CC(CCC(O)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4254.7Semi standard non polar33892256
Lucidumol A,3TBDMS,isomer #4CC(CCC(O)C(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1C=C3O[Si](C)(C)C(C)(C)C4031.5Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Lucidumol A GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4i-7002900000-c8c3ea5374293f5737202017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lucidumol A GC-MS (2 TMS) - 70eV, Positivesplash10-0udi-2422259000-0202f51457969e1a32b52017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lucidumol A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 10V, Positive-QTOFsplash10-05fr-0001900000-07565e04fbd1698d8fb52015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 20V, Positive-QTOFsplash10-052r-3216900000-6b5f80d40d317f21151a2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 40V, Positive-QTOFsplash10-067s-2539400000-b1fbdef1a592c1f8e8262015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 10V, Negative-QTOFsplash10-00di-0000900000-f30f157395895ac951f92015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 20V, Negative-QTOFsplash10-0h90-1001900000-97399ef3d7dbf199ba8c2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 40V, Negative-QTOFsplash10-0079-9002300000-17d04c6abfcc9b1a95f22015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 10V, Positive-QTOFsplash10-05br-0221900000-fe5aa92cadb6be48030e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 20V, Positive-QTOFsplash10-056s-9606300000-db4a98b2dc497e732f522021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 40V, Positive-QTOFsplash10-056u-8339000000-3f4779ba495f071afd602021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 10V, Negative-QTOFsplash10-00di-0000900000-412d71480584cfcb1a212021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 20V, Negative-QTOFsplash10-0fk9-2002900000-93b27475a895f409fdcf2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lucidumol A 40V, Negative-QTOFsplash10-00lb-1008900000-7750e9173faea74ab7dc2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011248
KNApSAcK IDC00030692
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound75596296
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.