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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:13:25 UTC
Update Date2022-03-07 02:53:44 UTC
HMDB IDHMDB0033491
Secondary Accession Numbers
  • HMDB33491
Metabolite Identification
Common NamePectenotoxin 2
DescriptionPectenotoxin 2 belongs to the class of organic compounds known as pectenotoxins and derivatives. These are a group of poly-ether-lactone toxins. Based on a literature review a significant number of articles have been published on Pectenotoxin 2.
Structure
Data?1563862414
SynonymsNot Available
Chemical FormulaC47H70O14
Average Molecular Weight859.0503
Monoisotopic Molecular Weight858.476556948
IUPAC Name(8E,10E)-14-(2,3-dihydroxy-4-methyloxan-2-yl)-28-hydroxy-5,7,9,19,29,35-hexamethyl-13,17,38,39,40,41,42,43-octaoxaoctacyclo[31.4.1.1^{1,35}.1^{2,5}.1^{20,24}.1^{24,27}.1^{29,32}.0^{12,16}]tritetraconta-8,10-diene-18,31-dione
Traditional Name(8E,10E)-14-(2,3-dihydroxy-4-methyloxan-2-yl)-28-hydroxy-5,7,9,19,29,35-hexamethyl-13,17,38,39,40,41,42,43-octaoxaoctacyclo[31.4.1.1^{1,35}.1^{2,5}.1^{20,24}.1^{24,27}.1^{29,32}.0^{12,16}]tritetraconta-8,10-diene-18,31-dione
CAS Registry Number97564-91-5
SMILES
[H]\C1=C(/[H])\C(\C)=C([H])/C(C)CC2(C)CCC(O2)C23CCC(C)(CC(O2)C2OC(C)(CC2=O)C(O)C2CCC4(CCCC(O4)C(C)C(=O)OC4CC(OC14)C1(O)OCCC(C)C1O)O2)O3
InChI Identifier
InChI=1S/C47H70O14/c1-26-10-11-32-34(22-37(54-32)47(52)39(49)28(3)14-20-53-47)55-41(51)29(4)31-9-8-15-45(56-31)17-12-33(57-45)40(50)44(7)24-30(48)38(60-44)35-25-43(6)18-19-46(58-35,61-43)36-13-16-42(5,59-36)23-27(2)21-26/h10-11,21,27-29,31-40,49-50,52H,8-9,12-20,22-25H2,1-7H3/b11-10-,26-21-
InChI KeyPTKFEDGHUVZLPL-QSCLRLNNSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pectenotoxins and derivatives. These are a group of poly-ether-lactone toxins.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassMacrolides and analogues
Sub ClassPectenotoxins and derivatives
Direct ParentPectenotoxins and derivatives
Alternative Parents
Substituents
  • Pectenotoxin fragment
  • Ketal
  • Oxepane
  • Meta-dioxane
  • 3-furanone
  • Oxane
  • Tetrahydrofuran
  • Carboxylic acid ester
  • Hemiacetal
  • Ketone
  • Lactone
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Acetal
  • Ether
  • Dialkyl ether
  • Carboxylic acid derivative
  • Oxacycle
  • Organoheterocyclic compound
  • Alcohol
  • Organic oxide
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Carbonyl group
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.01 g/LALOGPS
logP3ALOGPS
logP5.4ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)10.22ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count13ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area177.9 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity221.09 m³·mol⁻¹ChemAxon
Polarizability91.74 ųChemAxon
Number of Rings9ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-323.7930932474
DeepCCS[M+Na]+297.97430932474
AllCCS[M+H]+275.032859911
AllCCS[M+H-H2O]+274.232859911
AllCCS[M+NH4]+275.632859911
AllCCS[M+Na]+275.832859911
AllCCS[M-H]-284.032859911
AllCCS[M+Na-2H]-290.932859911
AllCCS[M+HCOO]-298.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Pectenotoxin 2[H]\C1=C(/[H])\C(\C)=C([H])/C(C)CC2(C)CCC(O2)C23CCC(C)(CC(O2)C2OC(C)(CC2=O)C(O)C2CCC4(CCCC(O4)C(C)C(=O)OC4CC(OC14)C1(O)OCCC(C)C1O)O2)O35423.1Standard polar33892256
Pectenotoxin 2[H]\C1=C(/[H])\C(\C)=C([H])/C(C)CC2(C)CCC(O2)C23CCC(C)(CC(O2)C2OC(C)(CC2=O)C(O)C2CCC4(CCCC(O4)C(C)C(=O)OC4CC(OC14)C1(O)OCCC(C)C1O)O2)O35467.2Standard non polar33892256
Pectenotoxin 2[H]\C1=C(/[H])\C(\C)=C([H])/C(C)CC2(C)CCC(O2)C23CCC(C)(CC(O2)C2OC(C)(CC2=O)C(O)C2CCC4(CCCC(O4)C(C)C(=O)OC4CC(OC14)C1(O)OCCC(C)C1O)O2)O35570.1Semi standard non polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 10V, Positive-QTOFsplash10-0a4i-3200000290-b88ebe3ad2eb95713b522016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 20V, Positive-QTOFsplash10-0g29-1912051130-deaffc3386fb2d9a73ae2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 40V, Positive-QTOFsplash10-0kh0-9100001200-b18c16f0ba5603542ff82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 10V, Negative-QTOFsplash10-052r-9100000050-00b7b2ec06ff2c88a8ff2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 20V, Negative-QTOFsplash10-0pbi-9200201050-a00a37b6968f998b35442016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 40V, Negative-QTOFsplash10-0udr-9110001000-4f341ea4d7705feb6dba2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 10V, Positive-QTOFsplash10-0a4i-0000000090-ec4e567f5fb119f9950f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 20V, Positive-QTOFsplash10-0a4i-0000000090-9deddde978a9e35e62e92021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 40V, Positive-QTOFsplash10-0a4j-3300005190-231bcf26c63c4b94bd1d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 10V, Negative-QTOFsplash10-0a4i-0200000290-f22b41d64ef5163d29c22021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 20V, Negative-QTOFsplash10-056r-1400000980-9ec3c6d52ca4afb79e142021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pectenotoxin 2 40V, Negative-QTOFsplash10-0a6r-0100002950-872885b2151c3b8c9ed12021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011539
KNApSAcK IDC00057718
Chemspider ID4712650
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5821912
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .