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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:51:16 UTC
Update Date2022-03-07 02:53:58 UTC
HMDB IDHMDB0034070
Secondary Accession Numbers
  • HMDB34070
Metabolite Identification
Common NameSinigrin
DescriptionSinigrin belongs to the class of organic compounds known as alkylglucosinolates. These are organic compounds containing a glucosinolate moiety that carries an alkyl chain. Sinigrin is a bitter tasting compound. Sinigrin is found, on average, in the highest concentration within brussel sprouts (Brassica oleracea var. gemmifera) and cauliflowers (Brassica oleracea var. botrytis). Sinigrin has also been detected, but not quantified in, several different foods, such as radishes (Raphanus sativus), common cabbages (Brassica oleracea), cabbages (Brassica oleracea var. capitata), wasabis (Wasabia japonica), and white cabbages (Brassica oleracea L. var. capitata L. f. alba DC.). This could make sinigrin a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Sinigrin.
Structure
Thumb
Synonyms
ValueSource
1-thio-b-D-Glucopyranose 1-[N-(sulfooxy)-3-butenimidate], 9ciHMDB
2-Phenylethyl glucosinolateHMDB
Allyl glucosinolateHMDB
MyronateHMDB
Myronic acidHMDB
Sinigrin, monopotassium saltMeSH, HMDB
{[(e)-(1-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanyl}but-3-en-1-ylidene)amino]oxy}sulfonateGenerator
{[(e)-(1-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulphanyl}but-3-en-1-ylidene)amino]oxy}sulphonateGenerator
{[(e)-(1-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulphanyl}but-3-en-1-ylidene)amino]oxy}sulphonic acidGenerator
SinigrinMeSH
Chemical FormulaC10H17NO9S2
Average Molecular Weight359.373
Monoisotopic Molecular Weight359.034472527
IUPAC Name{[(E)-(1-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanyl}but-3-en-1-ylidene)amino]oxy}sulfonic acid
Traditional Name[(E)-(1-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanyl}but-3-en-1-ylidene)amino]oxysulfonic acid
CAS Registry Number534-69-0
SMILES
OC[C@H]1O[C@@H](S\C(=N\OS(O)(=O)=O)CC=C)[C@H](O)[C@@H](O)[C@@H]1O
InChI Identifier
InChI=1S/C10H17NO9S2/c1-2-3-6(11-20-22(16,17)18)21-10-9(15)8(14)7(13)5(4-12)19-10/h2,5,7-10,12-15H,1,3-4H2,(H,16,17,18)/b11-6+/t5-,7-,8+,9-,10+/m1/s1
InChI KeyPHZOWSSBXJXFOR-PTGZALFTSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alkylglucosinolates. These are organic compounds containing a glucosinolate moiety that carries an alkyl chain.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentAlkylglucosinolates
Alternative Parents
Substituents
  • Alkylglucosinolate
  • Glycosyl compound
  • S-glycosyl compound
  • Oxane
  • Monothioacetal
  • Organic sulfuric acid or derivatives
  • Secondary alcohol
  • Polyol
  • Oxacycle
  • Organoheterocyclic compound
  • Sulfenyl compound
  • Alcohol
  • Hydrocarbon derivative
  • Organosulfur compound
  • Organonitrogen compound
  • Organic oxide
  • Primary alcohol
  • Organic nitrogen compound
  • Organopnictogen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point125 - 127 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility1000000 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP1.049 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
Predicted Chromatographic Properties
Spectra
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012319
KNApSAcK IDC00001488
Chemspider ID5288338
KEGG Compound IDC08427
BioCyc ID2-PROPENYL-GLUCOSINOLATE
BiGG IDNot Available
Wikipedia LinkSinigrin
METLIN IDNot Available
PubChem Compound6911854
PDB IDSZZ
ChEBI ID9162
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1694181
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .