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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:50:22 UTC
Update Date2022-03-07 02:54:16 UTC
HMDB IDHMDB0034911
Secondary Accession Numbers
  • HMDB34911
Metabolite Identification
Common Name(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid
Description(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid, also known as 2-{[cyano(phenyl)methyl]-C-hydroxycarbonimidoyl}acetate, belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid has been detected, but not quantified in, pulses. This could make (S)-3-[(cyanophenylmethyl)amino]-3-oxopropanoic acid a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid.
Structure
Data?1563862634
Synonyms
ValueSource
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoateGenerator
2-{[cyano(phenyl)methyl]-C-hydroxycarbonimidoyl}acetateHMDB
Chemical FormulaC11H10N2O3
Average Molecular Weight218.2087
Monoisotopic Molecular Weight218.069142196
IUPAC Name2-{[cyano(phenyl)methyl]carbamoyl}acetic acid
Traditional Name2-[cyano(phenyl)methylcarbamoyl]acetic acid
CAS Registry Number161470-12-8
SMILES
OC(=O)CC(=O)NC(C#N)C1=CC=CC=C1
InChI Identifier
InChI=1S/C11H10N2O3/c12-7-9(8-4-2-1-3-5-8)13-10(14)6-11(15)16/h1-5,9H,6H2,(H,13,14)(H,15,16)
InChI KeyWMOFHAQITVHGSC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassNot Available
Direct ParentBenzene and substituted derivatives
Alternative Parents
Substituents
  • Monocyclic benzene moiety
  • 1,3-dicarbonyl compound
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Carbonitrile
  • Nitrile
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Carbonyl group
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.23 g/LALOGPS
logP0.66ALOGPS
logP0.56ChemAxon
logS-3ALOGPS
pKa (Strongest Acidic)2.34ChemAxon
pKa (Strongest Basic)-6.5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area90.19 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity55.13 m³·mol⁻¹ChemAxon
Polarizability20.93 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+150.27731661259
DarkChem[M-H]-147.10931661259
DeepCCS[M+H]+145.76430932474
DeepCCS[M-H]-143.36830932474
DeepCCS[M-2H]-176.65230932474
DeepCCS[M+Na]+151.71730932474
AllCCS[M+H]+147.632859911
AllCCS[M+H-H2O]+143.832859911
AllCCS[M+NH4]+151.132859911
AllCCS[M+Na]+152.232859911
AllCCS[M-H]-147.832859911
AllCCS[M+Na-2H]-148.032859911
AllCCS[M+HCOO]-148.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acidOC(=O)CC(=O)NC(C#N)C1=CC=CC=C12723.6Standard polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acidOC(=O)CC(=O)NC(C#N)C1=CC=CC=C11920.5Standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acidOC(=O)CC(=O)NC(C#N)C1=CC=CC=C12020.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)CC(=O)NC(C#N)C1=CC=CC=C11936.4Semi standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,1TMS,isomer #2C[Si](C)(C)N(C(=O)CC(=O)O)C(C#N)C1=CC=CC=C11908.1Semi standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CC(=O)N(C(C#N)C1=CC=CC=C1)[Si](C)(C)C1903.4Semi standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CC(=O)N(C(C#N)C1=CC=CC=C1)[Si](C)(C)C2010.8Standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(=O)NC(C#N)C1=CC=CC=C12187.2Semi standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C(=O)CC(=O)O)C(C#N)C1=CC=CC=C12107.6Semi standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(=O)N(C(C#N)C1=CC=CC=C1)[Si](C)(C)C(C)(C)C2338.9Semi standard non polar33892256
(S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(=O)N(C(C#N)C1=CC=CC=C1)[Si](C)(C)C(C)(C)C2419.6Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-014i-3900000000-5637aa4dbcf16d7e30e62017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid GC-MS (1 TMS) - 70eV, Positivesplash10-014i-5920000000-152f8ff5de5f9fbfe1492017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 10V, Positive-QTOFsplash10-00lr-1970000000-cd0ecae1647ecced1f8e2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 20V, Positive-QTOFsplash10-0f89-1900000000-60286e14c3f4617c9db82016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 40V, Positive-QTOFsplash10-0fur-6900000000-afb333d63298d720ac3e2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 10V, Negative-QTOFsplash10-014i-2890000000-c1244842af03a87d4f9f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 20V, Negative-QTOFsplash10-05gi-3910000000-2d6a95c74127c994be922016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 40V, Negative-QTOFsplash10-005c-9700000000-a4fca65802b44244e97b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 10V, Negative-QTOFsplash10-0uxs-0920000000-7da79dc605409d13e8ef2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 20V, Negative-QTOFsplash10-0pbc-9700000000-8d7702a403ad2a3463792021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 40V, Negative-QTOFsplash10-004l-9600000000-d2dfb48523428d22c5e62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 10V, Positive-QTOFsplash10-014i-0910000000-9bc316977f5965a8eef92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 20V, Positive-QTOFsplash10-0a4i-0900000000-a4c52c336853a00546f32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 40V, Positive-QTOFsplash10-014i-9700000000-c4772d1c5a52fd6bec822021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013492
KNApSAcK IDNot Available
Chemspider ID35013795
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751637
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .