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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 20:27:57 UTC

Update Date

2022-03-07 02:54:31 UTC

HMDB ID

HMDB0035471

Secondary Accession Numbers

HMDB35471

Metabolite Identification

Common Name

N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol

Description

N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol belongs to the class of organic compounds known as phytoceramides. These are n-acylated 4-hydroxysphinganine. Based on a literature review a significant number of articles have been published on N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02241211122D          

 49 48  0  0  0  0            999 V2000
   -5.7714   -0.1667    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5151    0.2465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5151    1.0714    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7714    1.4846    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6256    1.0714    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6256    0.2465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3680   -0.1667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3680   -0.9930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0291   -1.4062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1117   -2.2311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7714   -2.6443    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5151   -2.2311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5151   -1.4062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2574   -0.9930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9171   -1.4062    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6622   -0.9930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6622   -0.1667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9171    0.2465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9171    1.0714    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6622    1.4846    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2574    1.4846    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2574    2.3109    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9189    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2040    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4892    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7744    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0597    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3449    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6300    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0847    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7995    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5143    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2290    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9439    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6587    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3734    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0883    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8030    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5179    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2327    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9474    1.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6622    1.4088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8581    2.6443    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4175    0.6100    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6622    0.5825    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9474    0.1693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9474   -0.6569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2313   -1.0701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5151   -0.6569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3 21  1  0  0  0  0
  4 23  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 23 24  1  0  0  0  0
 23 43  2  0  0  0  0
 24 25  1  0  0  0  0
 24 44  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
M  END

HMDB0035471
     RDKit          3D
N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol
136135  0  0  0  0  0  0  0  0999 V2000
  -16.3936    0.9863   -1.2938 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.9452    2.3652   -0.7938 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.4127    2.4242   -0.7445 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9816    1.3464    0.1951 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4807    1.2536    0.3706 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8334    0.9740   -0.9588 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3518    0.8628   -0.9154 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8535   -0.2605    0.0119 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3832   -1.5533   -0.4407 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0019   -2.7464    0.3455 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3471   -2.8992    1.7390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8309   -2.2169    2.9140 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4549   -2.4518    3.3789 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2404   -2.1136    2.6552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9317   -0.6730    2.4105 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6053   -0.5009    1.6677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5709   -1.1408    0.3403 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3209   -1.0365   -0.4583 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0868   -1.6826   -0.0418 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4252   -1.3812    1.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1022   -2.1682    1.3620 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1350   -1.8323    0.2800 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3071   -0.3724    0.3093 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2333   -0.0567   -0.8137 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3534   -0.8949   -0.7382 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6848    1.3738   -0.7993 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9213    2.3501   -0.6641 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0924    1.6540   -0.9521 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.6200    2.9883   -0.9367 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7044    3.5518   -2.3578 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4091    3.5843   -2.9281 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8359    3.2271   -0.1474 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6334    2.8727    1.1804 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1520    2.7669   -0.6438 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3107    3.1271   -1.9903 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5879    1.3997   -0.2986 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9341    0.9635   -0.7990 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0983    0.9708   -2.2692 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4416    0.4536   -2.7499 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7118   -0.9741   -2.3634 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0176   -1.4253   -2.8819 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2594   -0.7420   -2.5275 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7717   -0.6829   -1.1514 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0076   -0.0327   -0.0815 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7648   -0.1293    1.2505 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0760    0.5687    1.1423 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8140    0.5231    2.4719 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0489   -0.9109    2.8462 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8622   -1.6593    1.8169 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.6535    0.5602   -1.9957 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3936    0.3134   -0.3978 H   0  0  0  0  0  0  0  0  0  0  0  0
  -17.3962    1.0890   -1.7303 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3514    3.1496   -1.4826 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3747    2.5740    0.2096 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0622    2.1950   -1.7819 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1415    3.4310   -0.4234 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.4757    1.5115    1.1754 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.3647    0.3755   -0.1939 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1359    2.2120    0.7660 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3026    0.4564    1.1147 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0575    1.8841   -1.5977 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.2804    0.1335   -1.5013 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0079    0.5591   -1.9325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8556    1.7876   -0.5683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9540    0.0219    1.0497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7383   -0.2712   -0.2209 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9687   -1.7274   -1.4951 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5077   -1.5177   -0.6196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8956   -2.9135    0.1207 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4435   -3.6668   -0.2200 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2948   -4.0364    2.0056 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5197   -2.8122    1.7972 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0424   -1.1139    2.9909 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4899   -2.6177    3.7975 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3287   -3.5589    3.6996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3588   -1.9541    4.4230 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3598   -2.4991    3.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2160   -2.7014    1.7023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7174   -0.1974    1.8404 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7604   -0.1533    3.3909 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8261   -0.7134    2.3797 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5465    0.6272    1.4862 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7888   -2.2586    0.4012 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4487   -0.7643   -0.2705 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5753   -1.4730   -1.4983 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1320    0.0556   -0.7438 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2761   -2.8212   -0.0467 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3616   -1.6028   -0.9154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3060   -0.3409    1.5311 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.2794   -3.2427    1.3888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6625   -1.8621    2.3315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4179   -2.1256   -0.7351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7939   -2.4446    0.5022 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7007   -0.1675    1.3018 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6049    0.2808    0.1954 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7595   -0.2327   -1.7961 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1051   -1.7433   -1.1731 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7047    0.8321   -1.0839 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7882    3.6244   -0.4900 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1023    4.5534   -2.4179 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2762    2.8836   -3.0298 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1949    4.4819   -3.2868 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9206    4.3791   -0.0804 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4959    2.8778    1.6987 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9151    3.4510   -0.1238 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4145    4.1100   -2.0190 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8914    0.5759   -0.5682 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6451    1.3078    0.8401 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1286   -0.0320   -0.3347 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6961    1.6401   -0.2965 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0526    2.0423   -2.6351 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2463    0.4472   -2.7385 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv0541 02241211122D          

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M  END
> <DATABASE_ID>
HMDB0035471

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCCCCCCCCCCCCCCCCCCCCC(O)C(=O)NC(CO)C(O)C(O)CCCCCCCCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C43H87NO5/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-27-29-31-33-35-37-41(47)43(49)44-39(38-45)42(48)40(46)36-34-32-30-28-26-16-14-12-10-8-6-4-2/h39-42,45-48H,3-38H2,1-2H3,(H,44,49)

> <INCHI_KEY>
YADUGDLSXPPFIP-UHFFFAOYSA-N

> <FORMULA>
C43H87NO5

> <MOLECULAR_WEIGHT>
698.1546

> <EXACT_MASS>
697.658424899

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_AVERAGE_POLARIZABILITY>
94.60816632127167

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-hydroxy-N-(1,3,4-trihydroxyoctadecan-2-yl)pentacosanamide

> <ALOGPS_LOGP>
9.51

> <JCHEM_LOGP>
13.126517797666668

> <ALOGPS_LOGS>
-7.02

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.42438895494546

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.696305495085273

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7917255790393964

> <JCHEM_POLAR_SURFACE_AREA>
110.02

> <JCHEM_REFRACTIVITY>
209.0758

> <JCHEM_ROTATABLE_BOND_COUNT>
40

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.60e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-hydroxy-N-(1,3,4-trihydroxyoctadecan-2-yl)pentacosanamide

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0035471
     RDKit          3D
N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol
136135  0  0  0  0  0  0  0  0999 V2000
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  -12.2804    0.1335   -1.5013 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0079    0.5591   -1.9325 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -9.9540    0.0219    1.0497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7383   -0.2712   -0.2209 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -8.8956   -2.9135    0.1207 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4435   -3.6668   -0.2200 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.8261   -0.7134    2.3797 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5465    0.6272    1.4862 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.4487   -0.7643   -0.2705 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5753   -1.4730   -1.4983 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1320    0.0556   -0.7438 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2761   -2.8212   -0.0467 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3616   -1.6028   -0.9154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3060   -0.3409    1.5311 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0406   -1.8836    2.0571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2794   -3.2427    1.3888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6625   -1.8621    2.3315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4179   -2.1256   -0.7351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7939   -2.4446    0.5022 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7007   -0.1675    1.3018 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6049    0.2808    0.1954 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7595   -0.2327   -1.7961 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1051   -1.7433   -1.1731 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7047    0.8321   -1.0839 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7882    3.6244   -0.4900 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1023    4.5534   -2.4179 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2762    2.8836   -3.0298 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1949    4.4819   -3.2868 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9206    4.3791   -0.0804 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4959    2.8778    1.6987 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9151    3.4510   -0.1238 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4145    4.1100   -2.0190 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8914    0.5759   -0.5682 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6451    1.3078    0.8401 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1286   -0.0320   -0.3347 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6961    1.6401   -0.2965 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0526    2.0423   -2.6351 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2463    0.4472   -2.7385 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4555    0.5588   -3.8459 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2200    1.0844   -2.2341 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9321   -1.5681   -2.9916 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5545   -1.2173   -1.3310 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9561   -1.5631   -4.0168 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1487   -2.5202   -2.5566 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.3215    0.3052   -2.9829 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.0888   -1.2618   -3.1370 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.0996   -1.6966   -0.7912 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.7555   -0.0928   -1.2405 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.8664    1.0699   -0.2218 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9989   -0.4593    0.1309 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.1349    0.3858    2.0030 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.9059   -1.2092    1.5067 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.7343    0.1915    0.3316 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8790    1.6513    0.8970 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.7377    1.1241    2.4222 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1573    0.9852    3.2299 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.0881   -1.3771    3.0961 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.6968   -0.8897    3.7675 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.5913   -0.9795    1.3693 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.2460   -2.0970    1.0213 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.3501   -2.5162    2.3544 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  O   UNK     0     -10.773  -0.311   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0     -12.162   0.460   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -12.162   2.000   0.000  0.00  0.00           C+0
HETATM    4  N   UNK     0     -10.773   2.771   0.000  0.00  0.00           N+0
HETATM    5  C   UNK     0      -6.768   2.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -6.768   0.460   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -8.154  -0.311   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -8.154  -1.854   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -9.388  -2.625   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -9.542  -4.165   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0     -10.773  -4.936   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0     -12.162  -4.165   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0     -12.162  -2.625   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0     -13.547  -1.854   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0     -14.779  -2.625   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0     -16.169  -1.854   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0     -16.169  -0.311   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0     -14.779   0.460   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0     -14.779   2.000   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0     -16.169   2.771   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0     -13.547   2.771   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0     -13.547   4.314   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -9.182   3.399   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -7.847   2.630   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -6.513   3.399   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -5.179   2.630   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -3.845   3.399   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -2.510   2.630   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.176   3.399   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       0.158   2.630   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       1.492   3.399   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       2.827   2.630   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       4.161   3.399   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.495   2.630   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       6.830   3.399   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       8.164   2.630   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       9.498   3.399   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      10.832   2.630   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      12.167   3.399   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      13.501   2.630   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      14.835   3.399   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      16.169   2.630   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0      -9.068   4.936   0.000  0.00  0.00           O+0
HETATM   44  O   UNK     0      -8.246   1.139   0.000  0.00  0.00           O+0
HETATM   45  C   UNK     0      16.169   1.087   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      14.835   0.316   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      14.835  -1.226   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      13.498  -1.998   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      12.162  -1.226   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   21                                                  
CONECT    4    3   23                                                       
CONECT    5    6                                                            
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21    3   19   22                                                  
CONECT   22   21                                                            
CONECT   23    4   24   43                                                  
CONECT   24   23   25   44                                                  
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   45                                                       
CONECT   43   23                                                            
CONECT   44   24                                                            
CONECT   45   42   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48                                                            
MASTER        0    0    0    0    0    0    0    0   49    0   96    0
END

COMPND    HMDB0035471
HETATM    1  C1  UNL     1     -16.394   0.986  -1.294  1.00  0.00           C  
HETATM    2  C2  UNL     1     -15.945   2.365  -0.794  1.00  0.00           C  
HETATM    3  C3  UNL     1     -14.413   2.424  -0.745  1.00  0.00           C  
HETATM    4  C4  UNL     1     -13.982   1.346   0.195  1.00  0.00           C  
HETATM    5  C5  UNL     1     -12.481   1.254   0.371  1.00  0.00           C  
HETATM    6  C6  UNL     1     -11.833   0.974  -0.959  1.00  0.00           C  
HETATM    7  C7  UNL     1     -10.352   0.863  -0.915  1.00  0.00           C  
HETATM    8  C8  UNL     1      -9.854  -0.261   0.012  1.00  0.00           C  
HETATM    9  C9  UNL     1     -10.383  -1.553  -0.441  1.00  0.00           C  
HETATM   10  C10 UNL     1     -10.002  -2.746   0.346  1.00  0.00           C  
HETATM   11  C11 UNL     1     -10.347  -2.899   1.739  1.00  0.00           C  
HETATM   12  C12 UNL     1      -9.831  -2.217   2.914  1.00  0.00           C  
HETATM   13  C13 UNL     1      -8.455  -2.452   3.379  1.00  0.00           C  
HETATM   14  C14 UNL     1      -7.240  -2.114   2.655  1.00  0.00           C  
HETATM   15  C15 UNL     1      -6.932  -0.673   2.410  1.00  0.00           C  
HETATM   16  C16 UNL     1      -5.605  -0.501   1.668  1.00  0.00           C  
HETATM   17  C17 UNL     1      -5.571  -1.141   0.340  1.00  0.00           C  
HETATM   18  C18 UNL     1      -4.321  -1.037  -0.458  1.00  0.00           C  
HETATM   19  C19 UNL     1      -3.087  -1.683  -0.042  1.00  0.00           C  
HETATM   20  C20 UNL     1      -2.425  -1.381   1.242  1.00  0.00           C  
HETATM   21  C21 UNL     1      -1.102  -2.168   1.362  1.00  0.00           C  
HETATM   22  C22 UNL     1      -0.135  -1.832   0.280  1.00  0.00           C  
HETATM   23  C23 UNL     1       0.307  -0.372   0.309  1.00  0.00           C  
HETATM   24  C24 UNL     1       1.233  -0.057  -0.814  1.00  0.00           C  
HETATM   25  O1  UNL     1       2.353  -0.895  -0.738  1.00  0.00           O  
HETATM   26  C25 UNL     1       1.685   1.374  -0.799  1.00  0.00           C  
HETATM   27  O2  UNL     1       0.921   2.350  -0.664  1.00  0.00           O  
HETATM   28  N1  UNL     1       3.092   1.654  -0.952  1.00  0.00           N  
HETATM   29  C26 UNL     1       3.620   2.988  -0.937  1.00  0.00           C  
HETATM   30  C27 UNL     1       3.704   3.552  -2.358  1.00  0.00           C  
HETATM   31  O3  UNL     1       2.409   3.584  -2.928  1.00  0.00           O  
HETATM   32  C28 UNL     1       4.836   3.227  -0.147  1.00  0.00           C  
HETATM   33  O4  UNL     1       4.633   2.873   1.180  1.00  0.00           O  
HETATM   34  C29 UNL     1       6.152   2.767  -0.644  1.00  0.00           C  
HETATM   35  O5  UNL     1       6.311   3.127  -1.990  1.00  0.00           O  
HETATM   36  C30 UNL     1       6.588   1.400  -0.299  1.00  0.00           C  
HETATM   37  C31 UNL     1       7.934   0.964  -0.799  1.00  0.00           C  
HETATM   38  C32 UNL     1       8.098   0.971  -2.269  1.00  0.00           C  
HETATM   39  C33 UNL     1       9.442   0.454  -2.750  1.00  0.00           C  
HETATM   40  C34 UNL     1       9.712  -0.974  -2.363  1.00  0.00           C  
HETATM   41  C35 UNL     1      11.018  -1.425  -2.882  1.00  0.00           C  
HETATM   42  C36 UNL     1      12.259  -0.742  -2.528  1.00  0.00           C  
HETATM   43  C37 UNL     1      12.772  -0.683  -1.151  1.00  0.00           C  
HETATM   44  C38 UNL     1      12.008  -0.033  -0.081  1.00  0.00           C  
HETATM   45  C39 UNL     1      12.765  -0.129   1.251  1.00  0.00           C  
HETATM   46  C40 UNL     1      14.076   0.569   1.142  1.00  0.00           C  
HETATM   47  C41 UNL     1      14.814   0.523   2.472  1.00  0.00           C  
HETATM   48  C42 UNL     1      15.049  -0.911   2.846  1.00  0.00           C  
HETATM   49  C43 UNL     1      15.862  -1.659   1.817  1.00  0.00           C  
HETATM   50  H1  UNL     1     -15.654   0.560  -1.996  1.00  0.00           H  
HETATM   51  H2  UNL     1     -16.394   0.313  -0.398  1.00  0.00           H  
HETATM   52  H3  UNL     1     -17.396   1.089  -1.730  1.00  0.00           H  
HETATM   53  H4  UNL     1     -16.351   3.150  -1.483  1.00  0.00           H  
HETATM   54  H5  UNL     1     -16.375   2.574   0.210  1.00  0.00           H  
HETATM   55  H6  UNL     1     -14.062   2.195  -1.782  1.00  0.00           H  
HETATM   56  H7  UNL     1     -14.142   3.431  -0.423  1.00  0.00           H  
HETATM   57  H8  UNL     1     -14.476   1.511   1.175  1.00  0.00           H  
HETATM   58  H9  UNL     1     -14.365   0.375  -0.194  1.00  0.00           H  
HETATM   59  H10 UNL     1     -12.136   2.212   0.766  1.00  0.00           H  
HETATM   60  H11 UNL     1     -12.303   0.456   1.115  1.00  0.00           H  
HETATM   61  H12 UNL     1     -12.057   1.884  -1.598  1.00  0.00           H  
HETATM   62  H13 UNL     1     -12.280   0.133  -1.501  1.00  0.00           H  
HETATM   63  H14 UNL     1     -10.008   0.559  -1.933  1.00  0.00           H  
HETATM   64  H15 UNL     1      -9.856   1.788  -0.568  1.00  0.00           H  
HETATM   65  H16 UNL     1      -9.954   0.022   1.050  1.00  0.00           H  
HETATM   66  H17 UNL     1      -8.738  -0.271  -0.221  1.00  0.00           H  
HETATM   67  H18 UNL     1      -9.969  -1.727  -1.495  1.00  0.00           H  
HETATM   68  H19 UNL     1     -11.508  -1.518  -0.620  1.00  0.00           H  
HETATM   69  H20 UNL     1      -8.896  -2.914   0.121  1.00  0.00           H  
HETATM   70  H21 UNL     1     -10.444  -3.667  -0.220  1.00  0.00           H  
HETATM   71  H22 UNL     1     -10.295  -4.036   2.006  1.00  0.00           H  
HETATM   72  H23 UNL     1     -11.520  -2.812   1.797  1.00  0.00           H  
HETATM   73  H24 UNL     1     -10.042  -1.114   2.991  1.00  0.00           H  
HETATM   74  H25 UNL     1     -10.490  -2.618   3.798  1.00  0.00           H  
HETATM   75  H26 UNL     1      -8.329  -3.559   3.700  1.00  0.00           H  
HETATM   76  H27 UNL     1      -8.359  -1.954   4.423  1.00  0.00           H  
HETATM   77  H28 UNL     1      -6.360  -2.499   3.278  1.00  0.00           H  
HETATM   78  H29 UNL     1      -7.216  -2.701   1.702  1.00  0.00           H  
HETATM   79  H30 UNL     1      -7.717  -0.197   1.840  1.00  0.00           H  
HETATM   80  H31 UNL     1      -6.760  -0.153   3.391  1.00  0.00           H  
HETATM   81  H32 UNL     1      -4.826  -0.713   2.380  1.00  0.00           H  
HETATM   82  H33 UNL     1      -5.546   0.627   1.486  1.00  0.00           H  
HETATM   83  H34 UNL     1      -5.789  -2.259   0.401  1.00  0.00           H  
HETATM   84  H35 UNL     1      -6.449  -0.764  -0.270  1.00  0.00           H  
HETATM   85  H36 UNL     1      -4.575  -1.473  -1.498  1.00  0.00           H  
HETATM   86  H37 UNL     1      -4.132   0.056  -0.744  1.00  0.00           H  
HETATM   87  H38 UNL     1      -3.276  -2.821  -0.047  1.00  0.00           H  
HETATM   88  H39 UNL     1      -2.362  -1.603  -0.915  1.00  0.00           H  
HETATM   89  H40 UNL     1      -2.306  -0.341   1.531  1.00  0.00           H  
HETATM   90  H41 UNL     1      -3.041  -1.884   2.057  1.00  0.00           H  
HETATM   91  H42 UNL     1      -1.279  -3.243   1.389  1.00  0.00           H  
HETATM   92  H43 UNL     1      -0.662  -1.862   2.331  1.00  0.00           H  
HETATM   93  H44 UNL     1      -0.418  -2.126  -0.735  1.00  0.00           H  
HETATM   94  H45 UNL     1       0.794  -2.445   0.502  1.00  0.00           H  
HETATM   95  H46 UNL     1       0.701  -0.168   1.302  1.00  0.00           H  
HETATM   96  H47 UNL     1      -0.605   0.281   0.195  1.00  0.00           H  
HETATM   97  H48 UNL     1       0.759  -0.233  -1.796  1.00  0.00           H  
HETATM   98  H49 UNL     1       2.105  -1.743  -1.173  1.00  0.00           H  
HETATM   99  H50 UNL     1       3.705   0.832  -1.084  1.00  0.00           H  
HETATM  100  H51 UNL     1       2.788   3.624  -0.490  1.00  0.00           H  
HETATM  101  H52 UNL     1       4.102   4.553  -2.418  1.00  0.00           H  
HETATM  102  H53 UNL     1       4.276   2.884  -3.030  1.00  0.00           H  
HETATM  103  H54 UNL     1       2.195   4.482  -3.287  1.00  0.00           H  
HETATM  104  H55 UNL     1       4.921   4.379  -0.080  1.00  0.00           H  
HETATM  105  H56 UNL     1       5.496   2.878   1.699  1.00  0.00           H  
HETATM  106  H57 UNL     1       6.915   3.451  -0.124  1.00  0.00           H  
HETATM  107  H58 UNL     1       6.415   4.110  -2.019  1.00  0.00           H  
HETATM  108  H59 UNL     1       5.891   0.576  -0.568  1.00  0.00           H  
HETATM  109  H60 UNL     1       6.645   1.308   0.840  1.00  0.00           H  
HETATM  110  H61 UNL     1       8.129  -0.032  -0.335  1.00  0.00           H  
HETATM  111  H62 UNL     1       8.696   1.640  -0.297  1.00  0.00           H  
HETATM  112  H63 UNL     1       8.053   2.042  -2.635  1.00  0.00           H  
HETATM  113  H64 UNL     1       7.246   0.447  -2.739  1.00  0.00           H  
HETATM  114  H65 UNL     1       9.455   0.559  -3.846  1.00  0.00           H  
HETATM  115  H66 UNL     1      10.220   1.084  -2.234  1.00  0.00           H  
HETATM  116  H67 UNL     1       8.932  -1.568  -2.992  1.00  0.00           H  
HETATM  117  H68 UNL     1       9.555  -1.217  -1.331  1.00  0.00           H  
HETATM  118  H69 UNL     1      10.956  -1.563  -4.017  1.00  0.00           H  
HETATM  119  H70 UNL     1      11.149  -2.520  -2.557  1.00  0.00           H  
HETATM  120  H71 UNL     1      12.322   0.305  -2.983  1.00  0.00           H  
HETATM  121  H72 UNL     1      13.089  -1.262  -3.137  1.00  0.00           H  
HETATM  122  H73 UNL     1      13.100  -1.697  -0.791  1.00  0.00           H  
HETATM  123  H74 UNL     1      13.755  -0.093  -1.241  1.00  0.00           H  
HETATM  124  H75 UNL     1      11.866   1.070  -0.222  1.00  0.00           H  
HETATM  125  H76 UNL     1      10.999  -0.459   0.131  1.00  0.00           H  
HETATM  126  H77 UNL     1      12.135   0.386   2.003  1.00  0.00           H  
HETATM  127  H78 UNL     1      12.906  -1.209   1.507  1.00  0.00           H  
HETATM  128  H79 UNL     1      14.734   0.192   0.332  1.00  0.00           H  
HETATM  129  H80 UNL     1      13.879   1.651   0.897  1.00  0.00           H  
HETATM  130  H81 UNL     1      15.738   1.124   2.422  1.00  0.00           H  
HETATM  131  H82 UNL     1      14.157   0.985   3.230  1.00  0.00           H  
HETATM  132  H83 UNL     1      14.088  -1.377   3.096  1.00  0.00           H  
HETATM  133  H84 UNL     1      15.697  -0.890   3.768  1.00  0.00           H  
HETATM  134  H85 UNL     1      16.591  -0.979   1.369  1.00  0.00           H  
HETATM  135  H86 UNL     1      15.246  -2.097   1.021  1.00  0.00           H  
HETATM  136  H87 UNL     1      16.350  -2.516   2.354  1.00  0.00           H  
CONECT    1    2   50   51   52
CONECT    2    3   53   54
CONECT    3    4   55   56
CONECT    4    5   57   58
CONECT    5    6   59   60
CONECT    6    7   61   62
CONECT    7    8   63   64
CONECT    8    9   65   66
CONECT    9   10   67   68
CONECT   10   11   69   70
CONECT   11   12   71   72
CONECT   12   13   73   74
CONECT   13   14   75   76
CONECT   14   15   77   78
CONECT   15   16   79   80
CONECT   16   17   81   82
CONECT   17   18   83   84
CONECT   18   19   85   86
CONECT   19   20   87   88
CONECT   20   21   89   90
CONECT   21   22   91   92
CONECT   22   23   93   94
CONECT   23   24   95   96
CONECT   24   25   26   97
CONECT   25   98
CONECT   26   27   27   28
CONECT   28   29   99
CONECT   29   30   32  100
CONECT   30   31  101  102
CONECT   31  103
CONECT   32   33   34  104
CONECT   33  105
CONECT   34   35   36  106
CONECT   35  107
CONECT   36   37  108  109
CONECT   37   38  110  111
CONECT   38   39  112  113
CONECT   39   40  114  115
CONECT   40   41  116  117
CONECT   41   42  118  119
CONECT   42   43  120  121
CONECT   43   44  122  123
CONECT   44   45  124  125
CONECT   45   46  126  127
CONECT   46   47  128  129
CONECT   47   48  130  131
CONECT   48   49  132  133
CONECT   49  134  135  136
END

HMDB0035471
     RDKit          3D
N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol
136135  0  0  0  0  0  0  0  0999 V2000
  -16.3936    0.9863   -1.2938 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.9452    2.3652   -0.7938 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.4127    2.4242   -0.7445 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9816    1.3464    0.1951 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4807    1.2536    0.3706 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8334    0.9740   -0.9588 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3518    0.8628   -0.9154 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8535   -0.2605    0.0119 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3832   -1.5533   -0.4407 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0019   -2.7464    0.3455 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3471   -2.8992    1.7390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8309   -2.2169    2.9140 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4549   -2.4518    3.3789 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2404   -2.1136    2.6552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9317   -0.6730    2.4105 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6053   -0.5009    1.6677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5709   -1.1408    0.3403 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3209   -1.0365   -0.4583 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0868   -1.6826   -0.0418 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4252   -1.3812    1.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1022   -2.1682    1.3620 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1350   -1.8323    0.2800 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3071   -0.3724    0.3093 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2333   -0.0567   -0.8137 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3534   -0.8949   -0.7382 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6848    1.3738   -0.7993 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9213    2.3501   -0.6641 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0924    1.6540   -0.9521 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.6200    2.9883   -0.9367 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7044    3.5518   -2.3578 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4091    3.5843   -2.9281 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8359    3.2271   -0.1474 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6334    2.8727    1.1804 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1520    2.7669   -0.6438 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3107    3.1271   -1.9903 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5879    1.3997   -0.2986 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9341    0.9635   -0.7990 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0983    0.9708   -2.2692 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4416    0.4536   -2.7499 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7118   -0.9741   -2.3634 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0176   -1.4253   -2.8819 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2594   -0.7420   -2.5275 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7717   -0.6829   -1.1514 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0076   -0.0327   -0.0815 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7648   -0.1293    1.2505 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0760    0.5687    1.1423 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8140    0.5231    2.4719 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0489   -0.9109    2.8462 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8622   -1.6593    1.8169 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.6535    0.5602   -1.9957 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3936    0.3134   -0.3978 H   0  0  0  0  0  0  0  0  0  0  0  0
  -17.3962    1.0890   -1.7303 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3514    3.1496   -1.4826 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3747    2.5740    0.2096 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0622    2.1950   -1.7819 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1415    3.4310   -0.4234 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.4757    1.5115    1.1754 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.3647    0.3755   -0.1939 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1359    2.2120    0.7660 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3026    0.4564    1.1147 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0575    1.8841   -1.5977 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.2804    0.1335   -1.5013 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
2-Hydroxy-N-(1,3,4-trihydroxyoctadecan-2-yl)pentacosanimidate	Generator

Chemical Formula

C₄₃H₈₇NO₅

Average Molecular Weight

698.1546

Monoisotopic Molecular Weight

697.658424899

IUPAC Name

2-hydroxy-N-(1,3,4-trihydroxyoctadecan-2-yl)pentacosanamide

Traditional Name

2-hydroxy-N-(1,3,4-trihydroxyoctadecan-2-yl)pentacosanamide

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCCCCCCCCCC(O)C(=O)NC(CO)C(O)C(O)CCCCCCCCCCCCCC

InChI Identifier

InChI=1S/C43H87NO5/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-27-29-31-33-35-37-41(47)43(49)44-39(38-45)42(48)40(46)36-34-32-30-28-26-16-14-12-10-8-6-4-2/h39-42,45-48H,3-38H2,1-2H3,(H,44,49)

InChI Key

YADUGDLSXPPFIP-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phytoceramides. These are n-acylated 4-hydroxysphinganine.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Sphingolipids

Sub Class

Ceramides

Direct Parent

Phytoceramides

Alternative Parents

Substituents

N-acyl-4-hydroxysphinganine
Fatty amide
Monosaccharide
N-acyl-amine
Fatty acyl
Carboxamide group
Secondary carboxylic acid amide
Secondary alcohol
Polyol
Carboxylic acid derivative
Primary alcohol
Organic nitrogen compound
Organooxygen compound
Organonitrogen compound
Carbonyl group
Alcohol
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organic oxygen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

a plant ceramide V (CPD-8459 )

Ontology

Physiological effect

Health effect

Metabolic syndrome (HMDB: HMDB0035471)
Lipotoxicity (HMDB: HMDB0035471)

Organoleptic effect

Touch

Smooth (HMDB: HMDB0035471)

Disposition

Biological location

Cell membrane (HMDB: HMDB0035471)
Intracellular membrane (HMDB: HMDB0035471)

Cellular substructure

Organelle

Endosome

Endosome (HMDB: HMDB0035471)

Extracellular (HMDB: HMDB0035471)
Membrane (HMDB: HMDB0035471)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0035471)

Source

Endogenous

Endogenous (HMDB: HMDB0035471)

Plant

Plant (HMDB: HMDB0035471)

Animal

Animal (HMDB: HMDB0035471)

Exogenous

Food

Food (HMDB: HMDB0035471)

Vegetable

Mushroom

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid peroxidation (HMDB: HMDB0035471)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0035471)

Cellular process

Cell signaling (HMDB: HMDB0035471)

Biochemical pathway

Apoptosis (HMDB: HMDB0035471)

Role

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	6.6e-05 g/L	ALOGPS
logP	9.51	ALOGPS
logP	13.13	ChemAxon
logS	-7	ALOGPS
pKa (Strongest Acidic)	12.7	ChemAxon
pKa (Strongest Basic)	-2.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	110.02 Å²	ChemAxon
Rotatable Bond Count	40	ChemAxon
Refractivity	209.08 m³·mol⁻¹	ChemAxon
Polarizability	94.61 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	277.442	31661259
DarkChem	[M-H]-	266.324	31661259
DeepCCS	[M+H]+	278.044	30932474
DeepCCS	[M-H]-	275.686	30932474
DeepCCS	[M-2H]-	308.977	30932474
DeepCCS	[M+Na]+	284.808	30932474
AllCCS	[M+H]+	290.2	32859911
AllCCS	[M+H-H2O]+	289.8	32859911
AllCCS	[M+NH4]+	290.4	32859911
AllCCS	[M+Na]+	290.5	32859911
AllCCS	[M-H]-	287.2	32859911
AllCCS	[M+Na-2H]-	289.8	32859911
AllCCS	[M+HCOO]-	292.8	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol	CCCCCCCCCCCCCCCCCCCCCCCC(O)C(=O)NC(CO)C(O)C(O)CCCCCCCCCCCCCC	3681.6	Standard polar	33892256
N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol	CCCCCCCCCCCCCCCCCCCCCCCC(O)C(=O)NC(CO)C(O)C(O)CCCCCCCCCCCCCC	3728.3	Standard non polar	33892256
N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol	CCCCCCCCCCCCCCCCCCCCCCCC(O)C(=O)NC(CO)C(O)C(O)CCCCCCCCCCCCCC	5386.0	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_1_4) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_1_5) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_1) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_2) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_3) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_4) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_5) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_6) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_7) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_8) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_9) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TMS_2_10) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TBDMS_1_1) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TBDMS_1_2) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TBDMS_1_3) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TBDMS_1_4) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol GC-MS (TBDMS_1_5) - 70eV, Positive	Not Available	2021-10-18	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 10V, Positive-QTOF	splash10-015a-0019007000-a0fe43d28d964399cd54	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 20V, Positive-QTOF	splash10-07ou-6218903000-d07233b36b6f817414e0	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 40V, Positive-QTOF	splash10-00kb-8849000000-eb6ded0381141c3b4eb2	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 10V, Negative-QTOF	splash10-0002-0025209000-34ac9acd587bc0079ad1	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 20V, Negative-QTOF	splash10-0zou-2059603000-b34a341b803060ac35f6	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 40V, Negative-QTOF	splash10-0a4i-9127000000-62a663a5660c37754b73	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 10V, Positive-QTOF	splash10-0002-4007009000-afbd7157bfe954b0424e	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 20V, Positive-QTOF	splash10-0zna-9108014000-330ab5a78540d615591f	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 40V, Positive-QTOF	splash10-0a4l-9202000000-107b3268de67baa4e8ca	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 10V, Negative-QTOF	splash10-0002-0000009000-db63f72ac9474a1ce1da	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 20V, Negative-QTOF	splash10-0002-3045709000-b385ea6da7865e8bf30b	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol 40V, Negative-QTOF	splash10-0f7c-9113400000-8170d95a5788a5b244b5	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB014156

KNApSAcK ID

Not Available

Chemspider ID

35013933

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

25203454

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
Divecha N, Irvine RF: Phospholipid signaling. Cell. 1995 Jan 27;80(2):269-78. [PubMed:7834746 ]
Ghosh S, Strum JC, Bell RM: Lipid biochemistry: functions of glycerolipids and sphingolipids in cellular signaling. FASEB J. 1997 Jan;11(1):45-50. [PubMed:9034165 ]
Pruett ST, Bushnev A, Hagedorn K, Adiga M, Haynes CA, Sullards MC, Liotta DC, Merrill AH Jr: Biodiversity of sphingoid bases ("sphingosines") and related amino alcohols. J Lipid Res. 2008 Aug;49(8):1621-39. doi: 10.1194/jlr.R800012-JLR200. Epub 2008 May 21. [PubMed:18499644 ]
Hannun YA, Obeid LM: Ceramide: an intracellular signal for apoptosis. Trends Biochem Sci. 1995 Feb;20(2):73-7. [PubMed:7701566 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Cevc, Gregor (1993). Phospholipids Handbook. Marcel Dekker.
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol (HMDB0035471)

MOL for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

3D MOL for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

3D SDF for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

3D-SDF for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

PDB for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

3D PDB for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

SMILES for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

INCHI for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

Structure for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

3D Structure for HMDB0035471 (N-(2R-Hydroxypentacosanoyl)-2S-amino-1,3S,4R-octadecanetriol)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

GC-MS Spectra

MS/MS Spectra