| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-11 21:10:53 UTC |
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| Update Date | 2023-02-21 17:25:05 UTC |
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| HMDB ID | HMDB0036115 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | (-)-3-Isothujone |
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| Description | (-)-3-Isothujone is found in alcoholic beverages. Ingredient of absinthe. Presence in food and beverages regulated by legislation.Thujone is a ketone and a monoterpene that occurs naturally in two diastereomeric forms: (-)-alpha-thujone and (+)-beta-thujone. It has a menthol odor. In addition to (-)-alpha-thujone and (+)-beta-thujone, there are their enantiomeric forms, (+)-alpha-thujone and (-)-beta-thujone. (Wikipedia |
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| Structure | CC(C)[C@@]12C[C@@H]1[C@@H](C)C(=O)C2 InChI=1S/C10H16O/c1-6(2)10-4-8(10)7(3)9(11)5-10/h6-8H,4-5H2,1-3H3/t7-,8-,10+/m1/s1 |
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| Synonyms | | Value | Source |
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| (-)-3-Thujanone | ChEBI | | (1S,4R,5R)-(-)-3-Thujanone | ChEBI | | (1S,4R,5R)-1-Isopropyl-4-methylbicyclo[3.1.0]hexan-3-one | ChEBI | | [1S-(1alpha,4alpha,5alpha)]-4-Methyl-1-(1-methylethyl)bicyclo[3.1.0]hexan-3-one | ChEBI | | alpha-Thujone | ChEBI | | L-Thujone | ChEBI | | Thujon | ChEBI | | Thujone | ChEBI | | [1S-(1a,4a,5a)]-4-Methyl-1-(1-methylethyl)bicyclo[3.1.0]hexan-3-one | Generator | | [1S-(1Α,4α,5α)]-4-methyl-1-(1-methylethyl)bicyclo[3.1.0]hexan-3-one | Generator | | a-Thujone | Generator | | Α-thujone | Generator | | (-)-a-Thujone | HMDB | | (-)-alpha-Thujone | HMDB | | (-)-Isothujone | HMDB | | (-)-Thujone | HMDB, MeSH | | (-)-trans-Thujone | HMDB | | (1S,4R,5R)-Thujan-3-one | HMDB | | alpha-(-)-Thujone | HMDB | | L-alpha-Thujone | HMDB | | 3-Isothujone | MeSH, HMDB | | 3-Thujanone | MeSH, HMDB | | beta-Thujone, 1S-(1alpha,4beta,5alpha)-isomer | MeSH, HMDB | | beta-Thujone | MeSH, HMDB | | beta-Thujone, (1S-(1alpha,4alpha,5alpha))-isomer | MeSH, HMDB | | beta-Thujone, (1alpha,4alpha,5alpha)-isomer | MeSH, HMDB | | (-)-3-Isothujone | KEGG | | (+)-Thujone | MeSH | | cis-Thujone | MeSH | | alpha, beta-Thujone | MeSH | | (1S,4R,5R)-4-Methyl-1-(1-methylethyl)bicyclo[3.1.0]hexan-3-one | PhytoBank | | (-)-α-Thujone | PhytoBank | | Absinthol | PhytoBank |
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| Chemical Formula | C10H16O |
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| Average Molecular Weight | 152.2334 |
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| Monoisotopic Molecular Weight | 152.120115134 |
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| IUPAC Name | (1S,4R,5R)-4-methyl-1-(propan-2-yl)bicyclo[3.1.0]hexan-3-one |
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| Traditional Name | thujone |
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| CAS Registry Number | 546-80-5 |
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| SMILES | CC(C)[C@@]12C[C@@H]1[C@@H](C)C(=O)C2 |
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| InChI Identifier | InChI=1S/C10H16O/c1-6(2)10-4-8(10)7(3)9(11)5-10/h6-8H,4-5H2,1-3H3/t7-,8-,10+/m1/s1 |
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| InChI Key | USMNOWBWPHYOEA-MRTMQBJTSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as bicyclic monoterpenoids. These are monoterpenoids containing exactly 2 rings, which are fused to each other. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Prenol lipids |
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| Sub Class | Monoterpenoids |
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| Direct Parent | Bicyclic monoterpenoids |
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| Alternative Parents | |
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| Substituents | - Bicyclic monoterpenoid
- Thujane monoterpenoid
- Cyclic ketone
- Ketone
- Organic oxygen compound
- Organic oxide
- Hydrocarbon derivative
- Organooxygen compound
- Carbonyl group
- Aliphatic homopolycyclic compound
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| Molecular Framework | Aliphatic homopolycyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | |
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| Disposition | |
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| Process | |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | |
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| Experimental Chromatographic Properties | Experimental Collision Cross Sections |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 4.28 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 15.0176 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 2.13 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 2041.6 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 518.1 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 185.0 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 299.6 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 306.2 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 579.8 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 674.2 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 81.2 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 1121.7 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 408.4 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1338.9 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 346.3 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 385.1 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 383.1 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 445.3 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 24.1 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| (-)-3-Isothujone,1TMS,isomer #1 | CC1=C(O[Si](C)(C)C)C[C@]2(C(C)C)C[C@H]12 | 1290.3 | Semi standard non polar | 33892256 | | (-)-3-Isothujone,1TMS,isomer #1 | CC1=C(O[Si](C)(C)C)C[C@]2(C(C)C)C[C@H]12 | 1341.1 | Standard non polar | 33892256 | | (-)-3-Isothujone,1TMS,isomer #2 | CC(C)[C@]12C=C(O[Si](C)(C)C)[C@H](C)[C@H]1C2 | 1220.7 | Semi standard non polar | 33892256 | | (-)-3-Isothujone,1TMS,isomer #2 | CC(C)[C@]12C=C(O[Si](C)(C)C)[C@H](C)[C@H]1C2 | 1300.1 | Standard non polar | 33892256 | | (-)-3-Isothujone,1TBDMS,isomer #1 | CC1=C(O[Si](C)(C)C(C)(C)C)C[C@]2(C(C)C)C[C@H]12 | 1520.9 | Semi standard non polar | 33892256 | | (-)-3-Isothujone,1TBDMS,isomer #1 | CC1=C(O[Si](C)(C)C(C)(C)C)C[C@]2(C(C)C)C[C@H]12 | 1549.2 | Standard non polar | 33892256 | | (-)-3-Isothujone,1TBDMS,isomer #2 | CC(C)[C@]12C=C(O[Si](C)(C)C(C)(C)C)[C@H](C)[C@H]1C2 | 1436.0 | Semi standard non polar | 33892256 | | (-)-3-Isothujone,1TBDMS,isomer #2 | CC(C)[C@]12C=C(O[Si](C)(C)C(C)(C)C)[C@H](C)[C@H]1C2 | 1487.2 | Standard non polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Experimental GC-MS | GC-MS Spectrum - (-)-3-Isothujone EI-B (Non-derivatized) | splash10-0159-9100000000-9e3f8c13550e0c33d603 | 2017-09-12 | HMDB team, MONA, MassBank | View Spectrum | | Experimental GC-MS | GC-MS Spectrum - (-)-3-Isothujone EI-B (Non-derivatized) | splash10-0159-9100000000-9e3f8c13550e0c33d603 | 2018-05-18 | HMDB team, MONA, MassBank | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - (-)-3-Isothujone GC-MS (Non-derivatized) - 70eV, Positive | splash10-00ou-9300000000-5ac67463cc6dff4e26c5 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - (-)-3-Isothujone GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 10V, Positive-QTOF | splash10-0udi-0900000000-e5a1ab6ee8fcd2e7222d | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 20V, Positive-QTOF | splash10-0udi-7900000000-e4ab468ffb3afaf16129 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 40V, Positive-QTOF | splash10-0pe9-9000000000-960a6c7d4901afec9233 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 10V, Negative-QTOF | splash10-0udi-0900000000-07a82b9f8d15764ed904 | 2016-08-04 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 20V, Negative-QTOF | splash10-0udi-0900000000-65761ceb0d88aa809b6a | 2016-08-04 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 40V, Negative-QTOF | splash10-0006-9500000000-4023ebf09d9995d37111 | 2016-08-04 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 10V, Negative-QTOF | splash10-0udi-0900000000-c373c9eea3cebf186f53 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 20V, Negative-QTOF | splash10-0udi-0900000000-e8b89c21a7958e185278 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 40V, Negative-QTOF | splash10-0pdl-7900000000-5c5ad8968d995b2431ac | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 10V, Positive-QTOF | splash10-0006-8900000000-a32be7e7fd99fd0b8b23 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 20V, Positive-QTOF | splash10-000x-9300000000-eac02498908e1d67934a | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (-)-3-Isothujone 40V, Positive-QTOF | splash10-0006-9400000000-22a79a891aa2c60d074e | 2021-09-25 | Wishart Lab | View Spectrum |
IR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-04 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-04 | FELIX lab | View Spectrum |
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| General References | - Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
- Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
- Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
- Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
- (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
- Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.
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