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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:52:37 UTC
Update Date2022-03-07 02:55:02 UTC
HMDB IDHMDB0036709
Secondary Accession Numbers
  • HMDB36709
Metabolite Identification
Common NameYucalexin B14
DescriptionYucalexin B14 belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Yucalexin B14 is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862913
Synonyms
ValueSource
ent-3b-Hydroxy-15-beyeren-12-oneHMDB
Chemical FormulaC20H30O2
Average Molecular Weight302.451
Monoisotopic Molecular Weight302.224580204
IUPAC Name6-hydroxy-5,5,9,13-tetramethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-14-en-12-one
Traditional Name6-hydroxy-5,5,9,13-tetramethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-14-en-12-one
CAS Registry Number119626-51-6
SMILES
CC12CC3(CCC4C(C)(C)C(O)CCC4(C)C3CC1=O)C=C2
InChI Identifier
InChI=1S/C20H30O2/c1-17(2)13-5-8-20-10-9-18(3,12-20)16(22)11-14(20)19(13,4)7-6-15(17)21/h9-10,13-15,21H,5-8,11-12H2,1-4H3
InChI KeyJPKPHLVETUEKFT-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0065 g/LALOGPS
logP3.4ALOGPS
logP3.72ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)19.48ChemAxon
pKa (Strongest Basic)-0.84ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area37.3 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity89.12 m³·mol⁻¹ChemAxon
Polarizability35.53 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+171.20631661259
DarkChem[M-H]-168.76331661259
DeepCCS[M-2H]-210.23830932474
DeepCCS[M+Na]+185.80330932474
AllCCS[M+H]+176.432859911
AllCCS[M+H-H2O]+173.432859911
AllCCS[M+NH4]+179.232859911
AllCCS[M+Na]+180.032859911
AllCCS[M-H]-183.132859911
AllCCS[M+Na-2H]-183.332859911
AllCCS[M+HCOO]-183.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Yucalexin B14CC12CC3(CCC4C(C)(C)C(O)CCC4(C)C3CC1=O)C=C22792.5Standard polar33892256
Yucalexin B14CC12CC3(CCC4C(C)(C)C(O)CCC4(C)C3CC1=O)C=C22359.8Standard non polar33892256
Yucalexin B14CC12CC3(CCC4C(C)(C)C(O)CCC4(C)C3CC1=O)C=C22462.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Yucalexin B14,1TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)CCC4(C)C3CC1=O)C22447.5Semi standard non polar33892256
Yucalexin B14,1TMS,isomer #2CC12C=CC3(CCC4C(C)(C)C(O)CCC4(C)C3C=C1O[Si](C)(C)C)C22553.2Semi standard non polar33892256
Yucalexin B14,2TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)CCC4(C)C3C=C1O[Si](C)(C)C)C22530.6Semi standard non polar33892256
Yucalexin B14,2TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)CCC4(C)C3C=C1O[Si](C)(C)C)C22391.6Standard non polar33892256
Yucalexin B14,1TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC1=O)C22704.5Semi standard non polar33892256
Yucalexin B14,1TBDMS,isomer #2CC12C=CC3(CCC4C(C)(C)C(O)CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C22799.4Semi standard non polar33892256
Yucalexin B14,2TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C23030.6Semi standard non polar33892256
Yucalexin B14,2TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C22775.9Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Yucalexin B14 GC-MS (Non-derivatized) - 70eV, Positivesplash10-0079-0190000000-f10cf8075eb2042fe26d2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Yucalexin B14 GC-MS (1 TMS) - 70eV, Positivesplash10-0532-2039000000-9bb400b47aadc3914bdc2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Yucalexin B14 GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 10V, Negative-QTOFsplash10-0udi-0029000000-05c1690319e428cf66a62016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 20V, Negative-QTOFsplash10-0udi-0059000000-271f5d26fb63e75deb5d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 40V, Negative-QTOFsplash10-00ku-1190000000-2aa752af0b4cd67e5bfb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 10V, Negative-QTOFsplash10-0udi-0009000000-16d58525184e918518fa2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 20V, Negative-QTOFsplash10-0udi-0009000000-16d58525184e918518fa2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 40V, Negative-QTOFsplash10-0udi-0039000000-d6eb7a1d59f27bbd2b3c2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 10V, Positive-QTOFsplash10-0f79-0095000000-1bab081719aed119247e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 20V, Positive-QTOFsplash10-0f79-0291000000-0ab9753b1442bc46a9142016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 40V, Positive-QTOFsplash10-0ap3-4690000000-bff1bb8b41ab48cdd07a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 10V, Positive-QTOFsplash10-0udr-0079000000-5775c096c3a870dbe92e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 20V, Positive-QTOFsplash10-0uei-4593000000-821d658d34d8435f14222021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B14 40V, Positive-QTOFsplash10-055r-5970000000-b7c3479fd513bdffa0b02021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015645
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14191186
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.