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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:58:58 UTC
Update Date2022-03-07 02:55:04 UTC
HMDB IDHMDB0036806
Secondary Accession Numbers
  • HMDB36806
Metabolite Identification
Common NameAframodial
DescriptionAframodial belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Based on a literature review a small amount of articles have been published on Aframodial.
Structure
Data?1563862930
Synonyms
ValueSource
8b,17-Epoxy-12E-labdene-15,16-dialHMDB
8beta,17-Epoxyl-12E-labdene-15,16-dialHMDB
MiogadialHMDB
ZTHMDB
8,17-Epoxylabd-12-ene-15,16-dialMeSH
8,17-Epoxylabd-12-ene-15,16-dial, (1R-(1alpha(e),2alpha,4abeta,8aalpha))-isomerMeSH
ZT-DialMeSH
AframodialMeSH
Chemical FormulaC20H30O3
Average Molecular Weight318.4504
Monoisotopic Molecular Weight318.219494826
IUPAC Name(2E)-2-(2-{5,5,8a-trimethyl-octahydro-1H-spiro[naphthalene-2,2'-oxirane]-1-yl}ethylidene)butanedial
Traditional Name(2E)-2-(2-{5,5,8a-trimethyl-hexahydro-1H-spiro[naphthalene-2,2'-oxirane]-1-yl}ethylidene)butanedial
CAS Registry Number71641-23-1
SMILES
CC1(C)CCCC2(C)C(C\C=C(/CC=O)C=O)C3(CO3)CCC12
InChI Identifier
InChI=1S/C20H30O3/c1-18(2)9-4-10-19(3)16(18)7-11-20(14-23-20)17(19)6-5-15(13-22)8-12-21/h5,12-13,16-17H,4,6-11,14H2,1-3H3/b15-5+
InChI KeyZAWCPGMKVKTLKI-PJQLUOCWSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Labdane diterpenoid
  • Diterpenoid
  • Alpha,beta-unsaturated aldehyde
  • Alpha-hydrogen aldehyde
  • Enal
  • Dialkyl ether
  • Oxacycle
  • Organoheterocyclic compound
  • Oxirane
  • Ether
  • Hydrocarbon derivative
  • Aldehyde
  • Organic oxygen compound
  • Organic oxide
  • Carbonyl group
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point90 - 92 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility2.17 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0014 g/LALOGPS
logP4.32ALOGPS
logP3.14ChemAxon
logS-5.4ALOGPS
pKa (Strongest Acidic)12.17ChemAxon
pKa (Strongest Basic)-4.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area46.67 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity91.75 m³·mol⁻¹ChemAxon
Polarizability36.13 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+175.28331661259
DarkChem[M-H]-171.7831661259
DeepCCS[M-2H]-210.88130932474
DeepCCS[M+Na]+186.2530932474
AllCCS[M+H]+178.832859911
AllCCS[M+H-H2O]+176.032859911
AllCCS[M+NH4]+181.532859911
AllCCS[M+Na]+182.332859911
AllCCS[M-H]-184.932859911
AllCCS[M+Na-2H]-185.432859911
AllCCS[M+HCOO]-186.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
AframodialCC1(C)CCCC2(C)C(C\C=C(/CC=O)C=O)C3(CO3)CCC123423.4Standard polar33892256
AframodialCC1(C)CCCC2(C)C(C\C=C(/CC=O)C=O)C3(CO3)CCC122404.7Standard non polar33892256
AframodialCC1(C)CCCC2(C)C(C\C=C(/CC=O)C=O)C3(CO3)CCC122613.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Aframodial,1TMS,isomer #1CC1(C)CCCC2(C)C1CCC1(CO1)C2C/C=C(/C=O)C=CO[Si](C)(C)C2849.6Semi standard non polar33892256
Aframodial,1TMS,isomer #1CC1(C)CCCC2(C)C1CCC1(CO1)C2C/C=C(/C=O)C=CO[Si](C)(C)C2666.1Standard non polar33892256
Aframodial,1TBDMS,isomer #1CC1(C)CCCC2(C)C1CCC1(CO1)C2C/C=C(/C=O)C=CO[Si](C)(C)C(C)(C)C3075.1Semi standard non polar33892256
Aframodial,1TBDMS,isomer #1CC1(C)CCCC2(C)C1CCC1(CO1)C2C/C=C(/C=O)C=CO[Si](C)(C)C(C)(C)C2904.7Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Aframodial GC-MS (Non-derivatized) - 70eV, Positivesplash10-000i-1492000000-200c965f9d8f3b2270082017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aframodial GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 10V, Positive-QTOFsplash10-014i-1059000000-ad9aba90d8d2eb5f383f2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 20V, Positive-QTOFsplash10-0005-8092000000-49b7479df99d1d2864992016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 40V, Positive-QTOFsplash10-0fr5-9540000000-3f447be100f7d2d3b80c2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 10V, Negative-QTOFsplash10-014i-0029000000-665115ad33e4a49ef13c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 20V, Negative-QTOFsplash10-014i-5079000000-93e71efaaa76dccab5672016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 40V, Negative-QTOFsplash10-0006-9040000000-e172af03159464d618572016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 10V, Negative-QTOFsplash10-014r-0097000000-9840a2772ade2353d4662021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 20V, Negative-QTOFsplash10-000i-0091000000-b52443d113ef3c761b412021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 40V, Negative-QTOFsplash10-0aor-7190000000-bb8554313d6dff1f17c72021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 10V, Positive-QTOFsplash10-014i-0019000000-17e99d8432551e2230cc2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 20V, Positive-QTOFsplash10-0ff0-3796000000-f05daf0a146e6f0868382021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aframodial 40V, Positive-QTOFsplash10-052f-9412000000-7ce6838d77032402f7f92021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015752
KNApSAcK IDC00022440
Chemspider ID35014255
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752056
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1857311
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.