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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:30:38 UTC
Update Date2022-03-07 02:55:15 UTC
HMDB IDHMDB0037267
Secondary Accession Numbers
  • HMDB37267
Metabolite Identification
Common Namexi-3-Methyldecane
Descriptionxi-3-Methyldecane belongs to the class of organic compounds known as branched alkanes. These are acyclic branched hydrocarbons having the general formula CnH2n+2. Thus, XI-3-methyldecane is considered to be a hydrocarbon. xi-3-Methyldecane has been detected, but not quantified in, a few different foods, such as fruits, herbs and spices, and pulses. This could make XI-3-methyldecane a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on xi-3-Methyldecane.
Structure
Data?1563863002
SynonymsNot Available
Chemical FormulaC11H24
Average Molecular Weight156.3083
Monoisotopic Molecular Weight156.187800768
IUPAC Name3-methyldecane
Traditional Namedecane, 3-methyl-
CAS Registry NumberNot Available
SMILES
CCCCCCCC(C)CC
InChI Identifier
InChI=1S/C11H24/c1-4-6-7-8-9-10-11(3)5-2/h11H,4-10H2,1-3H3
InChI KeyJJRUZTXRDDMYGM-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as branched alkanes. These are acyclic branched hydrocarbons having the general formula CnH2n+2.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassSaturated hydrocarbons
Sub ClassAlkanes
Direct ParentBranched alkanes
Alternative ParentsNot Available
Substituents
  • Branched alkane
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00035 g/LALOGPS
logP6.14ALOGPS
logP5.2ChemAxon
logS-5.6ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity52.36 m³·mol⁻¹ChemAxon
Polarizability22.32 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+138.58331661259
DarkChem[M-H]-136.62231661259
DeepCCS[M+H]+148.49630932474
DeepCCS[M-H]-145.4530932474
DeepCCS[M-2H]-182.56630932474
DeepCCS[M+Na]+157.83330932474
AllCCS[M+H]+144.332859911
AllCCS[M+H-H2O]+140.432859911
AllCCS[M+NH4]+148.032859911
AllCCS[M+Na]+149.132859911
AllCCS[M-H]-147.732859911
AllCCS[M+Na-2H]-149.932859911
AllCCS[M+HCOO]-152.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
xi-3-MethyldecaneCCCCCCCC(C)CC1064.1Standard polar33892256
xi-3-MethyldecaneCCCCCCCC(C)CC1066.0Standard non polar33892256
xi-3-MethyldecaneCCCCCCCC(C)CC1076.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - xi-3-Methyldecane GC-MS (Non-derivatized) - 70eV, Positivesplash10-05dv-9300000000-5e5c1bdf8e5bdfefca732017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - xi-3-Methyldecane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - xi-3-Methyldecane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 10V, Positive-QTOFsplash10-0a4i-1900000000-cb0bb357a6fec81c37d52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 20V, Positive-QTOFsplash10-0a4i-9700000000-bd4bfd48528e61c0bdb62016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 40V, Positive-QTOFsplash10-0abc-9000000000-23577ee2bc46d7aba1632016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 10V, Negative-QTOFsplash10-0a4i-0900000000-9ed56ae0f65888639ca42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 20V, Negative-QTOFsplash10-0a4i-0900000000-098e6fa38652ed8cabd32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 40V, Negative-QTOFsplash10-0a4r-9600000000-14a25773b8ab86a6378c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 10V, Positive-QTOFsplash10-052r-9000000000-f0e6f3b53f6783103f562021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 20V, Positive-QTOFsplash10-0abl-9000000000-1d7eb402882fae6455702021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 40V, Positive-QTOFsplash10-052f-9000000000-d0649462a53f1f679b542021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 10V, Negative-QTOFsplash10-0a4i-0900000000-d2e6b423da7c99ff19882021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 20V, Negative-QTOFsplash10-0pb9-0900000000-0b2b9b38a91d8aea3ff62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - xi-3-Methyldecane 40V, Negative-QTOFsplash10-0aos-9700000000-103c5b88aeacee606c2c2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB016285
KNApSAcK IDNot Available
Chemspider ID83276
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound92239
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .