Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 23:03:58 UTC
Update Date2022-03-07 02:55:31 UTC
HMDB IDHMDB0037806
Secondary Accession Numbers
  • HMDB37806
Metabolite Identification
Common NameDihydrocitronellal
DescriptionDihydrocitronellal belongs to the class of organic compounds known as medium-chain aldehydes. These are an aldehyde with a chain length containing between 6 and 12 carbon atoms. Dihydrocitronellal is a dry, grassy, and rose tasting compound. Based on a literature review very few articles have been published on Dihydrocitronellal.
Structure
Data?1563863091
Synonyms
ValueSource
FEMA 2390HMDB
Chemical FormulaC10H20O
Average Molecular Weight156.2652
Monoisotopic Molecular Weight156.151415262
IUPAC Name2,6-dimethyloctanal
Traditional Name2,6-dimethyloctanal
CAS Registry Number7779-07-9
SMILES
CCC(C)CCCC(C)C=O
InChI Identifier
InChI=1S/C10H20O/c1-4-9(2)6-5-7-10(3)8-11/h8-10H,4-7H2,1-3H3
InChI KeyCBOBADCVMLMQRW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as medium-chain aldehydes. These are an aldehyde with a chain length containing between 6 and 12 carbon atoms.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbonyl compounds
Direct ParentMedium-chain aldehydes
Alternative Parents
Substituents
  • Medium-chain aldehyde
  • Organic oxide
  • Hydrocarbon derivative
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point196.00 to 197.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Water Solubility58.11 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP3.659 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.014 g/LALOGPS
logP3.87ALOGPS
logP3.37ChemAxon
logS-4ALOGPS
pKa (Strongest Acidic)16.07ChemAxon
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area17.07 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity48.47 m³·mol⁻¹ChemAxon
Polarizability19.99 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+137.54931661259
DarkChem[M-H]-136.29331661259
DeepCCS[M+H]+144.47930932474
DeepCCS[M-H]-141.06430932474
DeepCCS[M-2H]-178.24530932474
DeepCCS[M+Na]+153.70830932474
AllCCS[M+H]+140.732859911
AllCCS[M+H-H2O]+136.732859911
AllCCS[M+NH4]+144.432859911
AllCCS[M+Na]+145.432859911
AllCCS[M-H]-143.432859911
AllCCS[M+Na-2H]-145.632859911
AllCCS[M+HCOO]-148.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
DihydrocitronellalCCC(C)CCCC(C)C=O1425.5Standard polar33892256
DihydrocitronellalCCC(C)CCCC(C)C=O1105.9Standard non polar33892256
DihydrocitronellalCCC(C)CCCC(C)C=O1130.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Dihydrocitronellal,1TMS,isomer #1CCC(C)CCCC(C)=CO[Si](C)(C)C1341.8Semi standard non polar33892256
Dihydrocitronellal,1TMS,isomer #1CCC(C)CCCC(C)=CO[Si](C)(C)C1273.3Standard non polar33892256
Dihydrocitronellal,1TBDMS,isomer #1CCC(C)CCCC(C)=CO[Si](C)(C)C(C)(C)C1563.3Semi standard non polar33892256
Dihydrocitronellal,1TBDMS,isomer #1CCC(C)CCCC(C)=CO[Si](C)(C)C(C)(C)C1477.3Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Dihydrocitronellal GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a6s-9200000000-5b33133feafd7f8a299e2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dihydrocitronellal GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dihydrocitronellal GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 10V, Positive-QTOFsplash10-0a4i-2900000000-90c670eb0a14c4ffcb0f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 20V, Positive-QTOFsplash10-0abi-9400000000-3fc87e8255e6cb91863f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 40V, Positive-QTOFsplash10-0a4i-9000000000-f13ec8977ce9ef95ecc02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 10V, Negative-QTOFsplash10-0a4i-0900000000-f61ec7c8260da76a2ee12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 20V, Negative-QTOFsplash10-0a4i-1900000000-619bc0cbf90287eb4c792016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 40V, Negative-QTOFsplash10-0a4i-9200000000-edfb668d19c8329ed54f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 10V, Positive-QTOFsplash10-0avr-9000000000-e482545b3b4bee7a58412021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 20V, Positive-QTOFsplash10-0a4i-9000000000-81055e70ece7fa3637b12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 40V, Positive-QTOFsplash10-0a4l-9000000000-9f238985e767722c57892021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 10V, Negative-QTOFsplash10-0a4i-0900000000-7df893a41e9e681873552021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 20V, Negative-QTOFsplash10-0a4i-2900000000-1545f1c52e5043cab6ba2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydrocitronellal 40V, Negative-QTOFsplash10-0aos-9200000000-bbe6228c64abda5075442021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB016951
KNApSAcK IDNot Available
Chemspider ID4576431
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5463910
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1424291
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .