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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-12 00:01:50 UTC

Update Date

2022-03-07 02:55:52 UTC

HMDB ID

HMDB0038695

Secondary Accession Numbers

HMDB38695

Metabolite Identification

Common Name

3beta-Cucurbita-5,24-dien-3-ol

Description

3beta-Cucurbita-5,24-dien-3-ol belongs to the class of organic compounds known as cucurbitacins. These are polycyclic compounds containing the tetracyclic cucurbitane nucleus skeleton, 19-(10->9b)-abeo-10alanost-5-ene (also known as 9b-methyl-19-nor lanosta-5-ene), with a variety of oxygenation functionalities at different positions. Based on a literature review a significant number of articles have been published on 3beta-Cucurbita-5,24-dien-3-ol.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 05061310352D          

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M  END

HMDB0038695
     RDKit          3D
3beta-Cucurbita-5,24-dien-3-ol
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M  END


  Mrv0541 05061310352D          

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 31 26  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0038695

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(CCC=C(C)C)C1CCC2(C)C3CC=C4C(CCC(O)C4(C)C)C3(C)CCC12C

> <INCHI_IDENTIFIER>
InChI=1S/C30H50O/c1-20(2)10-9-11-21(3)22-16-17-30(8)25-14-12-23-24(13-15-26(31)27(23,4)5)28(25,6)18-19-29(22,30)7/h10,12,21-22,24-26,31H,9,11,13-19H2,1-8H3

> <INCHI_KEY>
WSPRAEIJBDUDRX-UHFFFAOYSA-N

> <FORMULA>
C30H50O

> <MOLECULAR_WEIGHT>
426.7174

> <EXACT_MASS>
426.386166222

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
54.33982497796819

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
1,6,6,11,15-pentamethyl-14-(6-methylhept-5-en-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-5-ol

> <ALOGPS_LOGP>
7.94

> <JCHEM_LOGP>
7.750330345666665

> <ALOGPS_LOGS>
-6.68

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
19.408471039623986

> <JCHEM_PKA_STRONGEST_BASIC>
-0.8705347672684683

> <JCHEM_POLAR_SURFACE_AREA>
20.23

> <JCHEM_REFRACTIVITY>
134.81129999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.96e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1,6,6,11,15-pentamethyl-14-(6-methylhept-5-en-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-5-ol

> <JCHEM_VEBER_RULE>
1

$$$$

HMDB0038695
     RDKit          3D
3beta-Cucurbita-5,24-dien-3-ol
 81 84  0  0  0  0  0  0  0  0999 V2000
    7.4569    1.0603    1.3141 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4964    0.5608   -0.0774 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7895    0.4933   -0.7879 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3918    0.1800   -0.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0498    0.2253   -0.0091 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5204   -1.1694    0.0148 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1561   -1.2990    0.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3538   -0.8022    2.0875 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1265   -0.4497   -0.0384 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0018   -0.8741   -1.5123 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5246   -0.8284   -1.8548 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0015    0.0185   -0.7230 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538    1.3958   -0.9114 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4507    0.1569   -0.6302 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2290   -0.8911   -1.4381 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6045   -0.3032   -1.6167 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2064    0.0195   -0.4642 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4310   -0.2506    0.7724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2211    0.3625    1.9228 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6000   -0.2032    1.9124 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3575    0.0222    0.6483 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8208   -1.2447    0.2214 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5736    0.6008   -0.4827 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5897    2.1074   -0.5387 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2941    0.1459   -1.7692 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0264    0.3157    0.7369 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1578    1.7806    1.1405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2149   -0.3368    1.8222 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2719   -0.0780    1.6746 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7194   -0.6767    0.4163 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5159   -2.1612    0.4561 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4908    1.2095    1.7103 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9908    0.2971    1.9487 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8851    2.0089    1.4069 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6780    0.0019   -1.7761 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4863   -0.1188   -0.1779 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.2527    1.5108   -0.8904 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4433   -0.1816   -1.6944 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2104    0.6149    1.0056 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3964    0.9550   -0.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2161   -1.7734    0.6446 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5536   -1.6177   -0.9906 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8880   -2.3569    0.7375 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4502   -0.7788    2.3666 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9235   -1.4966    2.8365 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9224    0.2129    2.2128 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4841    0.5926    0.0382 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3379   -1.8980   -1.6805 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6113   -0.2109   -2.1681 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3457   -0.3822   -2.8513 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0666   -1.8375   -1.8381 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4620    1.3858   -1.6549 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9150    1.8767    0.0307 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1485    2.0484   -1.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7253    1.1229   -1.1678 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3863   -1.8244   -0.9009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7434   -1.0702   -2.3977 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0575   -0.1580   -2.5835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4139   -1.3472    1.0014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2861    1.4482    1.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7237    0.0889    2.8746 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1626    0.2748    2.7665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5267   -1.2802    2.2005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2749    0.6330    0.8087 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7040   -1.1954   -0.1837 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4185    2.4887   -1.2076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7931    2.5932    0.4351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6643    2.4782   -1.0353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1231   -0.9390   -1.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3776    0.2905   -1.5585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9980    0.7513   -2.6292 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2151    2.3416    1.0013 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9518    2.3146    0.6270 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3184    1.7823    2.2535 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5864    0.0826    2.7847 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3922   -1.4218    1.8004 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4744    0.9972    1.8164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7197   -0.6458    2.5439 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8775   -2.4896    1.4754 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4916   -2.5281    0.3586 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1490   -2.7274   -0.2565 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 23 25  1  0
 18 26  1  0
 26 27  1  0
 26 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 30  9  1  0
 30 12  1  0
 26 14  1  0
 23 17  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  3 35  1  0
  3 36  1  0
  3 37  1  0
  4 38  1  0
  5 39  1  0
  5 40  1  0
  6 41  1  0
  6 42  1  0
  7 43  1  0
  8 44  1  0
  8 45  1  0
  8 46  1  0
  9 47  1  0
 10 48  1  0
 10 49  1  0
 11 50  1  0
 11 51  1  0
 13 52  1  0
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 15 56  1  0
 15 57  1  0
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 18 59  1  0
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 28 75  1  0
 28 76  1  0
 29 77  1  0
 29 78  1  0
 31 79  1  0
 31 80  1  0
 31 81  1  0
M  END

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -4.489   4.820   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -2.383   6.457   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.558   4.447   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      10.519  -2.124   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.381  -1.452   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.487   2.489   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.791   3.240   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.355  -1.089   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.493   4.025   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -2.018   3.815   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.452   2.809   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.541  -1.585   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      10.003   2.218   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.025  -1.314   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.519   1.947   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.495   0.325   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.770  -0.539   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.971   2.761   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.455   3.032   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.964   5.030   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.978   3.020   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.923   1.804   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       9.533  -0.407   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       9.010   1.041   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.502   0.135   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      12.042   0.499   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      11.049  -0.678   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       7.494   1.312   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.462   1.854   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.985   0.406   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      13.558   0.228   0.000  0.00  0.00           O+0
CONECT    1   20                                                            
CONECT    2   20                                                            
CONECT    3   21                                                            
CONECT    4   27                                                            
CONECT    5   27                                                            
CONECT    6   28                                                            
CONECT    7   29                                                            
CONECT    8   30                                                            
CONECT    9   10   11                                                       
CONECT   10    9   20                                                       
CONECT   11    9   21                                                       
CONECT   12   14   23                                                       
CONECT   13   15   24                                                       
CONECT   14   12   25                                                       
CONECT   15   13   26                                                       
CONECT   16   17   22                                                       
CONECT   17   16   30                                                       
CONECT   18   19   28                                                       
CONECT   19   18   29                                                       
CONECT   20    1    2   10                                                  
CONECT   21    3   11   22                                                  
CONECT   22   16   21   29                                                  
CONECT   23   12   24   27                                                  
CONECT   24   13   23   28                                                  
CONECT   25   14   28   30                                                  
CONECT   26   15   27   31                                                  
CONECT   27    4    5   23   26                                             
CONECT   28    6   18   24   25                                             
CONECT   29    7   19   22   30                                             
CONECT   30    8   17   25   29                                             
CONECT   31   26                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   68    0
END

COMPND    HMDB0038695
HETATM    1  C1  UNL     1       7.457   1.060   1.314  1.00  0.00           C  
HETATM    2  C2  UNL     1       7.496   0.561  -0.077  1.00  0.00           C  
HETATM    3  C3  UNL     1       8.789   0.493  -0.788  1.00  0.00           C  
HETATM    4  C4  UNL     1       6.392   0.180  -0.678  1.00  0.00           C  
HETATM    5  C5  UNL     1       5.050   0.225  -0.009  1.00  0.00           C  
HETATM    6  C6  UNL     1       4.520  -1.169   0.015  1.00  0.00           C  
HETATM    7  C7  UNL     1       3.156  -1.299   0.669  1.00  0.00           C  
HETATM    8  C8  UNL     1       3.354  -0.802   2.088  1.00  0.00           C  
HETATM    9  C9  UNL     1       2.126  -0.450  -0.038  1.00  0.00           C  
HETATM   10  C10 UNL     1       2.002  -0.874  -1.512  1.00  0.00           C  
HETATM   11  C11 UNL     1       0.525  -0.828  -1.855  1.00  0.00           C  
HETATM   12  C12 UNL     1       0.001   0.019  -0.723  1.00  0.00           C  
HETATM   13  C13 UNL     1       0.654   1.396  -0.911  1.00  0.00           C  
HETATM   14  C14 UNL     1      -1.451   0.157  -0.630  1.00  0.00           C  
HETATM   15  C15 UNL     1      -2.229  -0.891  -1.438  1.00  0.00           C  
HETATM   16  C16 UNL     1      -3.604  -0.303  -1.617  1.00  0.00           C  
HETATM   17  C17 UNL     1      -4.206   0.020  -0.464  1.00  0.00           C  
HETATM   18  C18 UNL     1      -3.431  -0.251   0.772  1.00  0.00           C  
HETATM   19  C19 UNL     1      -4.221   0.362   1.923  1.00  0.00           C  
HETATM   20  C20 UNL     1      -5.600  -0.203   1.912  1.00  0.00           C  
HETATM   21  C21 UNL     1      -6.357   0.022   0.648  1.00  0.00           C  
HETATM   22  O1  UNL     1      -6.821  -1.245   0.221  1.00  0.00           O  
HETATM   23  C22 UNL     1      -5.574   0.601  -0.483  1.00  0.00           C  
HETATM   24  C23 UNL     1      -5.590   2.107  -0.539  1.00  0.00           C  
HETATM   25  C24 UNL     1      -6.294   0.146  -1.769  1.00  0.00           C  
HETATM   26  C25 UNL     1      -2.026   0.316   0.737  1.00  0.00           C  
HETATM   27  C26 UNL     1      -2.158   1.781   1.140  1.00  0.00           C  
HETATM   28  C27 UNL     1      -1.215  -0.337   1.822  1.00  0.00           C  
HETATM   29  C28 UNL     1       0.272  -0.078   1.675  1.00  0.00           C  
HETATM   30  C29 UNL     1       0.719  -0.677   0.416  1.00  0.00           C  
HETATM   31  C30 UNL     1       0.516  -2.161   0.456  1.00  0.00           C  
HETATM   32  H1  UNL     1       8.491   1.209   1.710  1.00  0.00           H  
HETATM   33  H2  UNL     1       6.991   0.297   1.949  1.00  0.00           H  
HETATM   34  H3  UNL     1       6.885   2.009   1.407  1.00  0.00           H  
HETATM   35  H4  UNL     1       8.678   0.002  -1.776  1.00  0.00           H  
HETATM   36  H5  UNL     1       9.486  -0.119  -0.178  1.00  0.00           H  
HETATM   37  H6  UNL     1       9.253   1.511  -0.890  1.00  0.00           H  
HETATM   38  H7  UNL     1       6.443  -0.182  -1.694  1.00  0.00           H  
HETATM   39  H8  UNL     1       5.210   0.615   1.006  1.00  0.00           H  
HETATM   40  H9  UNL     1       4.396   0.955  -0.531  1.00  0.00           H  
HETATM   41  H10 UNL     1       5.216  -1.773   0.645  1.00  0.00           H  
HETATM   42  H11 UNL     1       4.554  -1.618  -0.991  1.00  0.00           H  
HETATM   43  H12 UNL     1       2.888  -2.357   0.738  1.00  0.00           H  
HETATM   44  H13 UNL     1       4.450  -0.779   2.367  1.00  0.00           H  
HETATM   45  H14 UNL     1       2.924  -1.497   2.836  1.00  0.00           H  
HETATM   46  H15 UNL     1       2.922   0.213   2.213  1.00  0.00           H  
HETATM   47  H16 UNL     1       2.484   0.593   0.038  1.00  0.00           H  
HETATM   48  H17 UNL     1       2.338  -1.898  -1.681  1.00  0.00           H  
HETATM   49  H18 UNL     1       2.611  -0.211  -2.168  1.00  0.00           H  
HETATM   50  H19 UNL     1       0.346  -0.382  -2.851  1.00  0.00           H  
HETATM   51  H20 UNL     1       0.067  -1.838  -1.838  1.00  0.00           H  
HETATM   52  H21 UNL     1       1.462   1.386  -1.655  1.00  0.00           H  
HETATM   53  H22 UNL     1       0.915   1.877   0.031  1.00  0.00           H  
HETATM   54  H23 UNL     1      -0.148   2.048  -1.371  1.00  0.00           H  
HETATM   55  H24 UNL     1      -1.725   1.123  -1.168  1.00  0.00           H  
HETATM   56  H25 UNL     1      -2.386  -1.824  -0.901  1.00  0.00           H  
HETATM   57  H26 UNL     1      -1.743  -1.070  -2.398  1.00  0.00           H  
HETATM   58  H27 UNL     1      -4.057  -0.158  -2.583  1.00  0.00           H  
HETATM   59  H28 UNL     1      -3.414  -1.347   1.001  1.00  0.00           H  
HETATM   60  H29 UNL     1      -4.286   1.448   1.890  1.00  0.00           H  
HETATM   61  H30 UNL     1      -3.724   0.089   2.875  1.00  0.00           H  
HETATM   62  H31 UNL     1      -6.163   0.275   2.766  1.00  0.00           H  
HETATM   63  H32 UNL     1      -5.527  -1.280   2.200  1.00  0.00           H  
HETATM   64  H33 UNL     1      -7.275   0.633   0.809  1.00  0.00           H  
HETATM   65  H34 UNL     1      -7.704  -1.195  -0.184  1.00  0.00           H  
HETATM   66  H35 UNL     1      -6.419   2.489  -1.208  1.00  0.00           H  
HETATM   67  H36 UNL     1      -5.793   2.593   0.435  1.00  0.00           H  
HETATM   68  H37 UNL     1      -4.664   2.478  -1.035  1.00  0.00           H  
HETATM   69  H38 UNL     1      -6.123  -0.939  -1.891  1.00  0.00           H  
HETATM   70  H39 UNL     1      -7.378   0.291  -1.559  1.00  0.00           H  
HETATM   71  H40 UNL     1      -5.998   0.751  -2.629  1.00  0.00           H  
HETATM   72  H41 UNL     1      -1.215   2.342   1.001  1.00  0.00           H  
HETATM   73  H42 UNL     1      -2.952   2.315   0.627  1.00  0.00           H  
HETATM   74  H43 UNL     1      -2.318   1.782   2.254  1.00  0.00           H  
HETATM   75  H44 UNL     1      -1.586   0.083   2.785  1.00  0.00           H  
HETATM   76  H45 UNL     1      -1.392  -1.422   1.800  1.00  0.00           H  
HETATM   77  H46 UNL     1       0.474   0.997   1.816  1.00  0.00           H  
HETATM   78  H47 UNL     1       0.720  -0.646   2.544  1.00  0.00           H  
HETATM   79  H48 UNL     1       0.877  -2.490   1.475  1.00  0.00           H  
HETATM   80  H49 UNL     1      -0.492  -2.528   0.359  1.00  0.00           H  
HETATM   81  H50 UNL     1       1.149  -2.727  -0.256  1.00  0.00           H  
CONECT    1    2   32   33   34
CONECT    2    3    4    4
CONECT    3   35   36   37
CONECT    4    5   38
CONECT    5    6   39   40
CONECT    6    7   41   42
CONECT    7    8    9   43
CONECT    8   44   45   46
CONECT    9   10   30   47
CONECT   10   11   48   49
CONECT   11   12   50   51
CONECT   12   13   14   30
CONECT   13   52   53   54
CONECT   14   15   26   55
CONECT   15   16   56   57
CONECT   16   17   17   58
CONECT   17   18   23
CONECT   18   19   26   59
CONECT   19   20   60   61
CONECT   20   21   62   63
CONECT   21   22   23   64
CONECT   22   65
CONECT   23   24   25
CONECT   24   66   67   68
CONECT   25   69   70   71
CONECT   26   27   28
CONECT   27   72   73   74
CONECT   28   29   75   76
CONECT   29   30   77   78
CONECT   30   31
CONECT   31   79   80   81
END

HMDB0038695
     RDKit          3D
3beta-Cucurbita-5,24-dien-3-ol
 81 84  0  0  0  0  0  0  0  0999 V2000
    7.4569    1.0603    1.3141 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4964    0.5608   -0.0774 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7895    0.4933   -0.7879 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3918    0.1800   -0.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0498    0.2253   -0.0091 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5204   -1.1694    0.0148 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1561   -1.2990    0.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3538   -0.8022    2.0875 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1265   -0.4497   -0.0384 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0018   -0.8741   -1.5123 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5246   -0.8284   -1.8548 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0015    0.0185   -0.7230 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538    1.3958   -0.9114 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4507    0.1569   -0.6302 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2290   -0.8911   -1.4381 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6045   -0.3032   -1.6167 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2064    0.0195   -0.4642 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.2211    0.3625    1.9228 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6000   -0.2032    1.9124 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3575    0.0222    0.6483 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8208   -1.2447    0.2214 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5736    0.6008   -0.4827 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5897    2.1074   -0.5387 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2941    0.1459   -1.7692 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.2149   -0.3368    1.8222 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.7194   -0.6767    0.4163 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5159   -2.1612    0.4561 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4908    1.2095    1.7103 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9908    0.2971    1.9487 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8851    2.0089    1.4069 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6780    0.0019   -1.7761 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4863   -0.1188   -0.1779 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.2527    1.5108   -0.8904 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4433   -0.1816   -1.6944 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2104    0.6149    1.0056 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3964    0.9550   -0.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2161   -1.7734    0.6446 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5536   -1.6177   -0.9906 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8880   -2.3569    0.7375 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4502   -0.7788    2.3666 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9235   -1.4966    2.8365 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9224    0.2129    2.2128 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4841    0.5926    0.0382 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3379   -1.8980   -1.6805 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6113   -0.2109   -2.1681 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3457   -0.3822   -2.8513 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0666   -1.8375   -1.8381 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4620    1.3858   -1.6549 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9150    1.8767    0.0307 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1485    2.0484   -1.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7253    1.1229   -1.1678 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3863   -1.8244   -0.9009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7434   -1.0702   -2.3977 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0575   -0.1580   -2.5835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4139   -1.3472    1.0014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2861    1.4482    1.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7237    0.0889    2.8746 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1626    0.2748    2.7665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5267   -1.2802    2.2005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2749    0.6330    0.8087 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7040   -1.1954   -0.1837 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4185    2.4887   -1.2076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7931    2.5932    0.4351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6643    2.4782   -1.0353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1231   -0.9390   -1.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3776    0.2905   -1.5585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9980    0.7513   -2.6292 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2151    2.3416    1.0013 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9518    2.3146    0.6270 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3184    1.7823    2.2535 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5864    0.0826    2.7847 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3922   -1.4218    1.8004 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4744    0.9972    1.8164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7197   -0.6458    2.5439 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8775   -2.4896    1.4754 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4916   -2.5281    0.3586 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1490   -2.7274   -0.2565 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 23 25  1  0
 18 26  1  0
 26 27  1  0
 26 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 30  9  1  0
 30 12  1  0
 26 14  1  0
 23 17  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  3 35  1  0
  3 36  1  0
  3 37  1  0
  4 38  1  0
  5 39  1  0
  5 40  1  0
  6 41  1  0
  6 42  1  0
  7 43  1  0
  8 44  1  0
  8 45  1  0
  8 46  1  0
  9 47  1  0
 10 48  1  0
 10 49  1  0
 11 50  1  0
 11 51  1  0
 13 52  1  0
 13 53  1  0
 13 54  1  0
 14 55  1  0
 15 56  1  0
 15 57  1  0
 16 58  1  0
 18 59  1  0
 19 60  1  0
 19 61  1  0
 20 62  1  0
 20 63  1  0
 21 64  1  0
 22 65  1  0
 24 66  1  0
 24 67  1  0
 24 68  1  0
 25 69  1  0
 25 70  1  0
 25 71  1  0
 27 72  1  0
 27 73  1  0
 27 74  1  0
 28 75  1  0
 28 76  1  0
 29 77  1  0
 29 78  1  0
 31 79  1  0
 31 80  1  0
 31 81  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
3b-Cucurbita-5,24-dien-3-ol	Generator
3Β-cucurbita-5,24-dien-3-ol	Generator
2,9-Dimethoxy-5,12-dihydroquino[2,3-b]acridine-7,14-dione	HMDB
Euferol	HMDB

Chemical Formula

C₃₀H₅₀O

Average Molecular Weight

426.7174

Monoisotopic Molecular Weight

426.386166222

IUPAC Name

1,6,6,11,15-pentamethyl-14-(6-methylhept-5-en-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-5-ol

Traditional Name

1,6,6,11,15-pentamethyl-14-(6-methylhept-5-en-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-5-ol

CAS Registry Number

128779-09-9

SMILES

CC(CCC=C(C)C)C1CCC2(C)C3CC=C4C(CCC(O)C4(C)C)C3(C)CCC12C

InChI Identifier

InChI=1S/C30H50O/c1-20(2)10-9-11-21(3)22-16-17-30(8)25-14-12-23-24(13-15-26(31)27(23,4)5)28(25,6)18-19-29(22,30)7/h10,12,21-22,24-26,31H,9,11,13-19H2,1-8H3

InChI Key

WSPRAEIJBDUDRX-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cucurbitacins. These are polycyclic compounds containing the tetracyclic cucurbitane nucleus skeleton, 19-(10->9b)-abeo-10alanost-5-ene (also known as 9b-methyl-19-nor lanosta-5-ene), with a variety of oxygenation functionalities at different positions.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Cucurbitacins

Direct Parent

Cucurbitacins

Alternative Parents

Substituents

Triterpenoid
Cucurbitacin skeleton
Hydroxysteroid
3-hydroxysteroid
3-hydroxy-delta-5-steroid
Delta-5-steroid
Cyclic alcohol
Secondary alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

a small molecule (CPD-11541 )

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Excreta

Biofluid or Excreta

Urine (HMDB: HMDB0038695)

Tissue

Nervous tissue

Hepatic tissue (HMDB: HMDB0038695)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0038695)

Source

Endogenous

Endogenous (HMDB: HMDB0038695)

Plant

Plant (HMDB: HMDB0038695)
Cucurbitaceae (HMDB: HMDB0038695)

Animal

Animal (HMDB: HMDB0038695)

Exogenous

Food

Food (HMDB: HMDB0038695)

Gourd

Bitter gourd (FooDB: FOOD00115)

Vegetable

Leaf vegetable

Green vegetables (FooDB: FOOD00872)

Exogenous (HMDB: HMDB0038695)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0038695)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0038695)

Lipid metabolism pathway (HMDB: HMDB0038695)

Cellular process

Cell signaling (HMDB: HMDB0038695)

Biochemical process

Lipid transport (HMDB: HMDB0038695)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0038695)

Molecular messenger

Signaling molecule (HMDB: HMDB0038695)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0038695)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	9.0e-05 g/L	ALOGPS
logP	7.94	ALOGPS
logP	7.75	ChemAxon
logS	-6.7	ALOGPS
pKa (Strongest Acidic)	19.41	ChemAxon
pKa (Strongest Basic)	-0.87	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	20.23 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	134.81 m³·mol⁻¹	ChemAxon
Polarizability	54.34 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	204.448	31661259
DarkChem	[M-H]-	194.502	31661259
DeepCCS	[M-2H]-	247.326	30932474
DeepCCS	[M+Na]+	222.703	30932474
AllCCS	[M+H]+	215.1	32859911
AllCCS	[M+H-H2O]+	213.2	32859911
AllCCS	[M+NH4]+	216.9	32859911
AllCCS	[M+Na]+	217.4	32859911
AllCCS	[M-H]-	214.8	32859911
AllCCS	[M+Na-2H]-	216.9	32859911
AllCCS	[M+HCOO]-	219.4	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022.	9.74 minutes	32390414
Predicted by Siyang on May 30, 2022	27.9682 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	2.06 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	3871.9 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	839.7 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	335.6 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	324.9 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	714.6 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	1150.8 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	1204.6 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	99.1 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	2173.5 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	781.5 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	2117.4 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	856.3 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	635.2 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	316.6 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	769.4 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	9.2 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
3beta-Cucurbita-5,24-dien-3-ol	CC(CCC=C(C)C)C1CCC2(C)C3CC=C4C(CCC(O)C4(C)C)C3(C)CCC12C	2975.3	Standard polar	33892256
3beta-Cucurbita-5,24-dien-3-ol	CC(CCC=C(C)C)C1CCC2(C)C3CC=C4C(CCC(O)C4(C)C)C3(C)CCC12C	3277.5	Standard non polar	33892256
3beta-Cucurbita-5,24-dien-3-ol	CC(CCC=C(C)C)C1CCC2(C)C3CC=C4C(CCC(O)C4(C)C)C3(C)CCC12C	3372.4	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
3beta-Cucurbita-5,24-dien-3-ol,1TMS,isomer #1	CC(C)=CCCC(C)C1CCC2(C)C3CC=C4C(CCC(O[Si](C)(C)C)C4(C)C)C3(C)CCC12C	3403.6	Semi standard non polar	33892256
3beta-Cucurbita-5,24-dien-3-ol,1TBDMS,isomer #1	CC(C)=CCCC(C)C1CCC2(C)C3CC=C4C(CCC(O[Si](C)(C)C(C)(C)C)C4(C)C)C3(C)CCC12C	3627.1	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol GC-MS (Non-derivatized) - 70eV, Positive	splash10-03dj-2119300000-0b59a287835643cb57c6	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol GC-MS (1 TMS) - 70eV, Positive	splash10-00lr-3011900000-4368fb325a8b2fcbec2b	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 10V, Positive-QTOF	splash10-0a6r-0003900000-c8d09ce1d255259f3593	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 20V, Positive-QTOF	splash10-0690-2129400000-8e83a78f94629ab7e364	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 40V, Positive-QTOF	splash10-0uxr-4159100000-f559ac02e59dd365761b	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 10V, Negative-QTOF	splash10-004i-0000900000-9d04a6a71ceb3c51a147	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 20V, Negative-QTOF	splash10-004i-0000900000-5d6245ed10ff1e09a115	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 40V, Negative-QTOF	splash10-0a4l-3009500000-f5ce0e33dee12642760b	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 10V, Negative-QTOF	splash10-004i-0000900000-590c9e4adfdd12b64d93	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 20V, Negative-QTOF	splash10-004i-0000900000-590c9e4adfdd12b64d93	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 40V, Negative-QTOF	splash10-00fr-1001900000-afe07e90be44478072f4	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 10V, Positive-QTOF	splash10-056u-9102300000-f3db0b8a6480d49b19a3	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 20V, Positive-QTOF	splash10-066u-9012000000-8f3ff9e8584719df188d	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Cucurbita-5,24-dien-3-ol 40V, Positive-QTOF	splash10-0a4i-9452000000-59ed91872dd8373df982	2021-09-22	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB018100

KNApSAcK ID

C00034506

Chemspider ID

550904

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

634657

PDB ID

Not Available

ChEBI ID

175466

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for 3beta-Cucurbita-5,24-dien-3-ol (HMDB0038695)

MOL for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

3D MOL for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

3D SDF for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

3D-SDF for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

PDB for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

3D PDB for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

SMILES for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

INCHI for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

Structure for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

3D Structure for HMDB0038695 (3beta-Cucurbita-5,24-dien-3-ol)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra