Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 00:02:34 UTC
Update Date2022-03-07 02:55:53 UTC
HMDB IDHMDB0038706
Secondary Accession Numbers
  • HMDB38706
Metabolite Identification
Common NamePerilloside A
DescriptionPerilloside A belongs to the class of organic compounds known as terpene glycosides. These are prenol lipids containing a carbohydrate moiety glycosidically bound to a terpene backbone. Based on a literature review a small amount of articles have been published on Perilloside A.
Structure
Data?1563863243
SynonymsNot Available
Chemical FormulaC16H26O6
Average Molecular Weight314.374
Monoisotopic Molecular Weight314.172938564
IUPAC Name2-(hydroxymethyl)-6-{[4-(prop-1-en-2-yl)cyclohex-1-en-1-yl]methoxy}oxane-3,4,5-triol
Traditional Name2-(hydroxymethyl)-6-{[4-(prop-1-en-2-yl)cyclohex-1-en-1-yl]methoxy}oxane-3,4,5-triol
CAS Registry NumberNot Available
SMILES
CC(=C)C1CCC(COC2OC(CO)C(O)C(O)C2O)=CC1
InChI Identifier
InChI=1S/C16H26O6/c1-9(2)11-5-3-10(4-6-11)8-21-16-15(20)14(19)13(18)12(7-17)22-16/h3,11-20H,1,4-8H2,2H3
InChI KeyYUTAFQVKXLDYFG-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as terpene glycosides. These are prenol lipids containing a carbohydrate moiety glycosidically bound to a terpene backbone.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene glycosides
Direct ParentTerpene glycosides
Alternative Parents
Substituents
  • Terpene glycoside
  • Glycosyl compound
  • O-glycosyl compound
  • Monocyclic monoterpenoid
  • Monoterpenoid
  • P-menthane monoterpenoid
  • Oxane
  • Monosaccharide
  • Secondary alcohol
  • Polyol
  • Acetal
  • Oxacycle
  • Organoheterocyclic compound
  • Primary alcohol
  • Organooxygen compound
  • Hydrocarbon derivative
  • Alcohol
  • Organic oxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point114.5 - 115 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility8.71 g/LALOGPS
logP0.13ALOGPS
logP0.17ChemAxon
logS-1.6ALOGPS
pKa (Strongest Acidic)12.21ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area99.38 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity80.67 m³·mol⁻¹ChemAxon
Polarizability33.87 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+174.54431661259
DarkChem[M-H]-168.23631661259
DeepCCS[M+H]+173.49130932474
DeepCCS[M-H]-171.13330932474
DeepCCS[M-2H]-204.49530932474
DeepCCS[M+Na]+180.25130932474
AllCCS[M+H]+178.332859911
AllCCS[M+H-H2O]+175.232859911
AllCCS[M+NH4]+181.232859911
AllCCS[M+Na]+182.032859911
AllCCS[M-H]-175.232859911
AllCCS[M+Na-2H]-175.632859911
AllCCS[M+HCOO]-176.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Perilloside ACC(=C)C1CCC(COC2OC(CO)C(O)C(O)C2O)=CC12704.8Standard polar33892256
Perilloside ACC(=C)C1CCC(COC2OC(CO)C(O)C(O)C2O)=CC12516.3Standard non polar33892256
Perilloside ACC(=C)C1CCC(COC2OC(CO)C(O)C(O)C2O)=CC12616.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Perilloside A,1TMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O)C(O)C2O)CC12576.2Semi standard non polar33892256
Perilloside A,1TMS,isomer #2C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C)C(O)C2O)CC12553.7Semi standard non polar33892256
Perilloside A,1TMS,isomer #3C=C(C)C1CC=C(COC2OC(CO)C(O)C(O[Si](C)(C)C)C2O)CC12543.9Semi standard non polar33892256
Perilloside A,1TMS,isomer #4C=C(C)C1CC=C(COC2OC(CO)C(O)C(O)C2O[Si](C)(C)C)CC12552.2Semi standard non polar33892256
Perilloside A,2TMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C2O)CC12577.8Semi standard non polar33892256
Perilloside A,2TMS,isomer #2C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C2O)CC12575.1Semi standard non polar33892256
Perilloside A,2TMS,isomer #3C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O)C(O)C2O[Si](C)(C)C)CC12573.8Semi standard non polar33892256
Perilloside A,2TMS,isomer #4C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O)CC12568.8Semi standard non polar33892256
Perilloside A,2TMS,isomer #5C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C)C(O)C2O[Si](C)(C)C)CC12571.0Semi standard non polar33892256
Perilloside A,2TMS,isomer #6C=C(C)C1CC=C(COC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)CC12579.9Semi standard non polar33892256
Perilloside A,3TMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O)CC12610.1Semi standard non polar33892256
Perilloside A,3TMS,isomer #2C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C2O[Si](C)(C)C)CC12623.6Semi standard non polar33892256
Perilloside A,3TMS,isomer #3C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)CC12605.4Semi standard non polar33892256
Perilloside A,3TMS,isomer #4C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)CC12590.9Semi standard non polar33892256
Perilloside A,4TMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)CC12652.1Semi standard non polar33892256
Perilloside A,1TBDMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C2O)CC12823.3Semi standard non polar33892256
Perilloside A,1TBDMS,isomer #2C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C2O)CC12807.7Semi standard non polar33892256
Perilloside A,1TBDMS,isomer #3C=C(C)C1CC=C(COC2OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C2O)CC12794.5Semi standard non polar33892256
Perilloside A,1TBDMS,isomer #4C=C(C)C1CC=C(COC2OC(CO)C(O)C(O)C2O[Si](C)(C)C(C)(C)C)CC12802.5Semi standard non polar33892256
Perilloside A,2TBDMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C2O)CC13032.2Semi standard non polar33892256
Perilloside A,2TBDMS,isomer #2C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C2O)CC13022.2Semi standard non polar33892256
Perilloside A,2TBDMS,isomer #3C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C2O[Si](C)(C)C(C)(C)C)CC13025.1Semi standard non polar33892256
Perilloside A,2TBDMS,isomer #4C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C2O)CC13026.4Semi standard non polar33892256
Perilloside A,2TBDMS,isomer #5C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C2O[Si](C)(C)C(C)(C)C)CC13032.8Semi standard non polar33892256
Perilloside A,2TBDMS,isomer #6C=C(C)C1CC=C(COC2OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)CC13034.0Semi standard non polar33892256
Perilloside A,3TBDMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C2O)CC13268.4Semi standard non polar33892256
Perilloside A,3TBDMS,isomer #2C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C2O[Si](C)(C)C(C)(C)C)CC13287.6Semi standard non polar33892256
Perilloside A,3TBDMS,isomer #3C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)CC13266.1Semi standard non polar33892256
Perilloside A,3TBDMS,isomer #4C=C(C)C1CC=C(COC2OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)CC13264.0Semi standard non polar33892256
Perilloside A,4TBDMS,isomer #1C=C(C)C1CC=C(COC2OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)CC13511.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Perilloside A GC-MS (Non-derivatized) - 70eV, Positivesplash10-05g1-9570000000-6696f8eaeb2128db59b22017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Perilloside A GC-MS (4 TMS) - 70eV, Positivesplash10-000i-3310190000-799b2e2dbfd47477c54e2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Perilloside A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Perilloside A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 10V, Positive-QTOFsplash10-00ks-2945000000-f4b91e97b5cca6f496322016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 20V, Positive-QTOFsplash10-000i-2900000000-449471f012954b4497d52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 40V, Positive-QTOFsplash10-000l-9700000000-2c4d0c4146d6dccb431f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 10V, Negative-QTOFsplash10-03di-2829000000-51663dd6747247c0dbe72016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 20V, Negative-QTOFsplash10-03k9-3921000000-06c112bcaa25b39c5be52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 40V, Negative-QTOFsplash10-0kfx-9600000000-3e80cc8dfb34a90c510e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 10V, Positive-QTOFsplash10-000m-9802000000-8bcc232a65ab7fcc48422021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 20V, Positive-QTOFsplash10-000f-9800000000-5036d74fb08f724ee0f62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 40V, Positive-QTOFsplash10-000x-9400000000-27deeafaaf0966e0f37b2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 10V, Negative-QTOFsplash10-03di-0009000000-7e8b81aa13a5e39c47162021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 20V, Negative-QTOFsplash10-03di-5915000000-3b60e94948fd68dfd8172021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Perilloside A 40V, Negative-QTOFsplash10-0pi0-9510000000-c479729d5e6df9709b292021-09-25Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB018113
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound73745655
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.