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Showing metabocard for 9-Hydroxygeraniol (HMDB0038744)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 00:05:05 UTC
Update Date2023-02-21 17:26:42 UTC
HMDB IDHMDB0038744
Secondary Accession Numbers
  • HMDB38744
Metabolite Identification
Common Name9-Hydroxygeraniol
Description9-Hydroxygeraniol belongs to the class of organic compounds known as acyclic monoterpenoids. These are monoterpenes that do not contain a cycle. Based on a literature review a small amount of articles have been published on 9-Hydroxygeraniol.
Structure
Data?1677000402
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0038744 (9-Hydroxygeraniol)


  Mrv0541 05061310372D          

 12 11  0  0  0  0            999 V2000
   -0.4125    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -3.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625    0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -2.1434    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  3  1  0  0  0  0
  5  3  1  0  0  0  0
  7  6  1  0  0  0  0
  9  1  1  0  0  0  0
  9  4  1  0  0  0  0
  9  6  2  0  0  0  0
 10  2  1  0  0  0  0
 10  5  2  0  0  0  0
 10  8  1  0  0  0  0
 11  7  1  0  0  0  0
 12  8  1  0  0  0  0
M  END
Download

3D MOL for HMDB0038744 (9-Hydroxygeraniol)

HMDB0038744
     RDKit          3D
9-Hydroxygeraniol
 30 29  0  0  0  0  0  0  0  0999 V2000
   -4.1973   -0.1086   -0.8525 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8876   -0.0742   -0.0716 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8265   -0.6426   -0.5681 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5074   -0.6719    0.0977 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5371    0.0228   -0.7791 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8676   -0.0028   -0.1153 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0600    0.6360    1.2112 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9104   -0.5868   -0.6748 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2589   -0.6679   -0.1076 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1386   -0.0403   -0.9887 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9050    0.6193    1.2269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2794    1.9554    0.9469 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0278   -0.1362   -0.1253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2700    0.7661   -1.5076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -1.0393   -1.4501 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9585   -1.1313   -1.5658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1193   -1.7353    0.1749 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4518   -0.2218    1.0744 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6311   -0.5044   -1.7593 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1906    1.0543   -0.9903 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0204    1.1569    1.3159 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2718    1.4424    1.2908 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9274   -0.0929    2.0323 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7428   -1.0493   -1.6502 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5544   -1.7577   -0.1201 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3538   -0.3353    0.9194 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9637    0.2566   -0.5120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7780    0.2381    1.8388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9888    0.6588    1.7843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9738    1.9920    0.2584 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  2  0
  8  9  1  0
  9 10  1  0
  2 11  1  0
 11 12  1  0
  1 13  1  0
  1 14  1  0
  1 15  1  0
  3 16  1  0
  4 17  1  0
  4 18  1  0
  5 19  1  0
  5 20  1  0
  7 21  1  0
  7 22  1  0
  7 23  1  0
  8 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 11 28  1  0
 11 29  1  0
 12 30  1  0
M  END
Download

3D SDF for HMDB0038744 (9-Hydroxygeraniol)


  Mrv0541 05061310372D          

 12 11  0  0  0  0            999 V2000
   -0.4125    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -3.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625    0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -2.1434    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  3  1  0  0  0  0
  5  3  1  0  0  0  0
  7  6  1  0  0  0  0
  9  1  1  0  0  0  0
  9  4  1  0  0  0  0
  9  6  2  0  0  0  0
 10  2  1  0  0  0  0
 10  5  2  0  0  0  0
 10  8  1  0  0  0  0
 11  7  1  0  0  0  0
 12  8  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0038744

> <DATABASE_NAME>
hmdb

> <SMILES>
C\C(CO)=C\CC\C(C)=C\CO

> <INCHI_IDENTIFIER>
InChI=1S/C10H18O2/c1-9(6-7-11)4-3-5-10(2)8-12/h5-6,11-12H,3-4,7-8H2,1-2H3/b9-6+,10-5-

> <INCHI_KEY>
PREUOUJFXMCMSJ-KWNZIKDBSA-N

> <FORMULA>
C10H18O2

> <MOLECULAR_WEIGHT>
170.2487

> <EXACT_MASS>
170.13067982

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
20.209378373712898

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2Z,6E)-2,6-dimethylocta-2,6-diene-1,8-diol

> <ALOGPS_LOGP>
1.62

> <JCHEM_LOGP>
1.221612139333333

> <ALOGPS_LOGS>
-1.75

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.815830404850864

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.15821115210554

> <JCHEM_PKA_STRONGEST_BASIC>
-2.0797068162582972

> <JCHEM_POLAR_SURFACE_AREA>
40.46

> <JCHEM_REFRACTIVITY>
52.9568

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.04e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2Z,6E)-2,6-dimethylocta-2,6-diene-1,8-diol

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0038744 (9-Hydroxygeraniol)

HMDB0038744
     RDKit          3D
9-Hydroxygeraniol
 30 29  0  0  0  0  0  0  0  0999 V2000
   -4.1973   -0.1086   -0.8525 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8876   -0.0742   -0.0716 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8265   -0.6426   -0.5681 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5074   -0.6719    0.0977 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5371    0.0228   -0.7791 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8676   -0.0028   -0.1153 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0600    0.6360    1.2112 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9104   -0.5868   -0.6748 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2589   -0.6679   -0.1076 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1386   -0.0403   -0.9887 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9050    0.6193    1.2269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2794    1.9554    0.9469 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0278   -0.1362   -0.1253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2700    0.7661   -1.5076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -1.0393   -1.4501 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9585   -1.1313   -1.5658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1193   -1.7353    0.1749 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4518   -0.2218    1.0744 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6311   -0.5044   -1.7593 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1906    1.0543   -0.9903 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0204    1.1569    1.3159 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2718    1.4424    1.2908 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9274   -0.0929    2.0323 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7428   -1.0493   -1.6502 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5544   -1.7577   -0.1201 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3538   -0.3353    0.9194 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9637    0.2566   -0.5120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7780    0.2381    1.8388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9888    0.6588    1.7843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9738    1.9920    0.2584 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  2  0
  8  9  1  0
  9 10  1  0
  2 11  1  0
 11 12  1  0
  1 13  1  0
  1 14  1  0
  1 15  1  0
  3 16  1  0
  4 17  1  0
  4 18  1  0
  5 19  1  0
  5 20  1  0
  7 21  1  0
  7 22  1  0
  7 23  1  0
  8 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 11 28  1  0
 11 29  1  0
 12 30  1  0
M  END
Download

PDB for HMDB0038744 (9-Hydroxygeraniol)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -0.770   1.334   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.770  -6.668   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.000  -2.667   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.770  -1.334   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.770  -4.001   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.540   0.000   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.310   1.334   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.540  -5.335   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000  -5.335   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       3.850   1.334   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0       2.310  -4.001   0.000  0.00  0.00           O+0
CONECT    1    9                                                            
CONECT    2   10                                                            
CONECT    3    4    5                                                       
CONECT    4    3    9                                                       
CONECT    5    3   10                                                       
CONECT    6    7    9                                                       
CONECT    7    6   11                                                       
CONECT    8   10   12                                                       
CONECT    9    1    4    6                                                  
CONECT   10    2    5    8                                                  
CONECT   11    7                                                            
CONECT   12    8                                                            
MASTER        0    0    0    0    0    0    0    0   12    0   22    0
END
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3D PDB for HMDB0038744 (9-Hydroxygeraniol)

COMPND    HMDB0038744
HETATM    1  C1  UNL     1      -4.197  -0.109  -0.853  1.00  0.00           C  
HETATM    2  C2  UNL     1      -2.888  -0.074  -0.072  1.00  0.00           C  
HETATM    3  C3  UNL     1      -1.826  -0.643  -0.568  1.00  0.00           C  
HETATM    4  C4  UNL     1      -0.507  -0.672   0.098  1.00  0.00           C  
HETATM    5  C5  UNL     1       0.537   0.023  -0.779  1.00  0.00           C  
HETATM    6  C6  UNL     1       1.868  -0.003  -0.115  1.00  0.00           C  
HETATM    7  C7  UNL     1       2.060   0.636   1.211  1.00  0.00           C  
HETATM    8  C8  UNL     1       2.910  -0.587  -0.675  1.00  0.00           C  
HETATM    9  C9  UNL     1       4.259  -0.668  -0.108  1.00  0.00           C  
HETATM   10  O1  UNL     1       5.139  -0.040  -0.989  1.00  0.00           O  
HETATM   11  C10 UNL     1      -2.905   0.619   1.227  1.00  0.00           C  
HETATM   12  O2  UNL     1      -3.279   1.955   0.947  1.00  0.00           O  
HETATM   13  H1  UNL     1      -5.028  -0.136  -0.125  1.00  0.00           H  
HETATM   14  H2  UNL     1      -4.270   0.766  -1.508  1.00  0.00           H  
HETATM   15  H3  UNL     1      -4.258  -1.039  -1.450  1.00  0.00           H  
HETATM   16  H4  UNL     1      -1.958  -1.131  -1.566  1.00  0.00           H  
HETATM   17  H5  UNL     1      -0.119  -1.735   0.175  1.00  0.00           H  
HETATM   18  H6  UNL     1      -0.452  -0.222   1.074  1.00  0.00           H  
HETATM   19  H7  UNL     1       0.631  -0.504  -1.759  1.00  0.00           H  
HETATM   20  H8  UNL     1       0.191   1.054  -0.990  1.00  0.00           H  
HETATM   21  H9  UNL     1       3.020   1.157   1.316  1.00  0.00           H  
HETATM   22  H10 UNL     1       1.272   1.442   1.291  1.00  0.00           H  
HETATM   23  H11 UNL     1       1.927  -0.093   2.032  1.00  0.00           H  
HETATM   24  H12 UNL     1       2.743  -1.049  -1.650  1.00  0.00           H  
HETATM   25  H13 UNL     1       4.554  -1.758  -0.120  1.00  0.00           H  
HETATM   26  H14 UNL     1       4.354  -0.335   0.919  1.00  0.00           H  
HETATM   27  H15 UNL     1       5.964   0.257  -0.512  1.00  0.00           H  
HETATM   28  H16 UNL     1      -3.778   0.238   1.839  1.00  0.00           H  
HETATM   29  H17 UNL     1      -1.989   0.659   1.784  1.00  0.00           H  
HETATM   30  H18 UNL     1      -3.974   1.992   0.258  1.00  0.00           H  
CONECT    1    2   13   14   15
CONECT    2    3    3   11
CONECT    3    4   16
CONECT    4    5   17   18
CONECT    5    6   19   20
CONECT    6    7    8    8
CONECT    7   21   22   23
CONECT    8    9   24
CONECT    9   10   25   26
CONECT   10   27
CONECT   11   12   28   29
CONECT   12   30
END
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SMILES for HMDB0038744 (9-Hydroxygeraniol)

C\C(CO)=C\CC\C(C)=C\CO
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INCHI for HMDB0038744 (9-Hydroxygeraniol)

InChI=1S/C10H18O2/c1-9(6-7-11)4-3-5-10(2)8-12/h5-6,11-12H,3-4,7-8H2,1-2H3/b9-6+,10-5-
Download
View in JSmolView NMR AssignmentsView Stereo Labels
SynonymsNot Available
Chemical FormulaC10H18O2
Average Molecular Weight170.2487
Monoisotopic Molecular Weight170.13067982
IUPAC Name(2Z,6E)-2,6-dimethylocta-2,6-diene-1,8-diol
Traditional Name(2Z,6E)-2,6-dimethylocta-2,6-diene-1,8-diol
CAS Registry Number32663-40-4
SMILES
C\C(CO)=C\CC\C(C)=C\CO
InChI Identifier
InChI=1S/C10H18O2/c1-9(6-7-11)4-3-5-10(2)8-12/h5-6,11-12H,3-4,7-8H2,1-2H3/b9-6+,10-5-
InChI KeyPREUOUJFXMCMSJ-KWNZIKDBSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acyclic monoterpenoids. These are monoterpenes that do not contain a cycle.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassMonoterpenoids
Direct ParentAcyclic monoterpenoids
Alternative Parents
Substituents
  • Acyclic monoterpenoid
  • Fatty alcohol
  • Fatty acyl
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationRoute of exposureSource
Process
Naturally occurring process
Role
Biological roleIndustrial application
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility534.7 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility3.04 g/LALOGPS
logP1.62ALOGPS
logP1.22ChemAxon
logS-1.8ALOGPS
pKa (Strongest Acidic)16.16ChemAxon
pKa (Strongest Basic)-2.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity52.96 m³·mol⁻¹ChemAxon
Polarizability20.21 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+141.4231661259
DarkChem[M-H]-138.25231661259
DeepCCS[M+H]+147.23630932474
DeepCCS[M-H]-143.40930932474
DeepCCS[M-2H]-180.82830932474
DeepCCS[M+Na]+156.46130932474
AllCCS[M+H]+141.432859911
AllCCS[M+H-H2O]+137.532859911
AllCCS[M+NH4]+145.132859911
AllCCS[M+Na]+146.132859911
AllCCS[M-H]-142.332859911
AllCCS[M+Na-2H]-144.132859911
AllCCS[M+HCOO]-146.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
9-HydroxygeraniolC\C(CO)=C\CC\C(C)=C\CO2520.5Standard polar33892256
9-HydroxygeraniolC\C(CO)=C\CC\C(C)=C\CO1434.4Standard non polar33892256
9-HydroxygeraniolC\C(CO)=C\CC\C(C)=C\CO1501.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
9-Hydroxygeraniol,1TMS,isomer #1C/C(=C/CC/C(C)=C/CO)CO[Si](C)(C)C1513.8Semi standard non polar33892256
9-Hydroxygeraniol,1TMS,isomer #2C/C(=C/CC/C(C)=C/CO[Si](C)(C)C)CO1547.7Semi standard non polar33892256
9-Hydroxygeraniol,2TMS,isomer #1C/C(=C/CC/C(C)=C/CO[Si](C)(C)C)CO[Si](C)(C)C1637.5Semi standard non polar33892256
9-Hydroxygeraniol,1TBDMS,isomer #1C/C(=C/CC/C(C)=C/CO)CO[Si](C)(C)C(C)(C)C1743.4Semi standard non polar33892256
9-Hydroxygeraniol,1TBDMS,isomer #2C/C(=C/CC/C(C)=C/CO[Si](C)(C)C(C)(C)C)CO1763.2Semi standard non polar33892256
9-Hydroxygeraniol,2TBDMS,isomer #1C/C(=C/CC/C(C)=C/CO[Si](C)(C)C(C)(C)C)CO[Si](C)(C)C(C)(C)C2079.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 9-Hydroxygeraniol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0079-9500000000-035bef7056691423a4b42017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 9-Hydroxygeraniol GC-MS (2 TMS) - 70eV, Positivesplash10-05dv-9770000000-17ffc2bc8d6592df368e2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 9-Hydroxygeraniol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 9-Hydroxygeraniol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 10V, Positive-QTOFsplash10-0uk9-1900000000-cab703d0c86b69d50dfd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 20V, Positive-QTOFsplash10-0uki-6900000000-6c1f7a6af5901d4656d72016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 40V, Positive-QTOFsplash10-0gi0-9200000000-50ac9f197f98b43168762016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 10V, Negative-QTOFsplash10-014i-0900000000-dc6794edf402325db2a02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 20V, Negative-QTOFsplash10-0fy9-0900000000-d3e941eaed0012977c202016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 40V, Negative-QTOFsplash10-0abi-9800000000-5f823ced46daa61e4aac2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 10V, Negative-QTOFsplash10-014i-0900000000-7944bb1cb3171565e1882021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 20V, Negative-QTOFsplash10-05tr-0900000000-04c0d33dd43ebb93db172021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 40V, Negative-QTOFsplash10-014i-9200000000-6997db3a61ffa9ec87c22021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 10V, Positive-QTOFsplash10-00ls-9300000000-f7c96b46296209cb97c22021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 20V, Positive-QTOFsplash10-05o1-9000000000-06bd685d1ade7ed256d92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 9-Hydroxygeraniol 40V, Positive-QTOFsplash10-0ap3-9000000000-48992c44001d05d261322021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB018155
KNApSAcK IDNot Available
Chemspider ID24785381
KEGG Compound IDNot Available
BioCyc IDCPD-15953
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound13619433
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1741931
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.