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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:46:41 UTC
Update Date2022-03-07 02:56:31 UTC
HMDB IDHMDB0040242
Secondary Accession Numbers
  • HMDB40242
Metabolite Identification
Common Name3-Methyl-5-pentyl-1,2,4-trithiolane
Description3-Methyl-5-pentyl-1,2,4-trithiolane belongs to the class of organic compounds known as trithiolanes. These are organic compounds containing a six-member aliphatic saturated heterocycle made up of three sulfur atoms and two carbon atoms. Based on a literature review very few articles have been published on 3-Methyl-5-pentyl-1,2,4-trithiolane.
Structure
Data?1563863511
SynonymsNot Available
Chemical FormulaC8H16S3
Average Molecular Weight208.408
Monoisotopic Molecular Weight208.041412582
IUPAC Name3-methyl-5-pentyl-1,2,4-trithiolane
Traditional Name3-methyl-5-pentyl-1,2,4-trithiolane
CAS Registry Number101517-93-5
SMILES
CCCCCC1SSC(C)S1
InChI Identifier
InChI=1S/C8H16S3/c1-3-4-5-6-8-9-7(2)10-11-8/h7-8H,3-6H2,1-2H3
InChI KeyMLOZURMZWJZSCN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as trithiolanes. These are organic compounds containing a six-member aliphatic saturated heterocycle made up of three sulfur atoms and two carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassTrithiolanes
Sub ClassNot Available
Direct ParentTrithiolanes
Alternative Parents
Substituents
  • Trithiolane
  • Organic disulfide
  • Dialkylthioether
  • Thioether
  • Hydrocarbon derivative
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point294.91 °C. @ 760.00 mm Hg (est)The Good Scents Company Information System
Water Solubility11.18 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP4.439 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.035 g/LALOGPS
logP4.17ALOGPS
logP4ChemAxon
logS-3.8ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity60.05 m³·mol⁻¹ChemAxon
Polarizability24.03 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+146.00931661259
DarkChem[M-H]-139.69831661259
DeepCCS[M+H]+149.50530932474
DeepCCS[M-H]-146.31330932474
DeepCCS[M-2H]-183.57530932474
DeepCCS[M+Na]+158.80430932474
AllCCS[M+H]+142.032859911
AllCCS[M+H-H2O]+138.332859911
AllCCS[M+NH4]+145.432859911
AllCCS[M+Na]+146.432859911
AllCCS[M-H]-151.832859911
AllCCS[M+Na-2H]-153.532859911
AllCCS[M+HCOO]-155.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3-Methyl-5-pentyl-1,2,4-trithiolaneCCCCCC1SSC(C)S12044.7Standard polar33892256
3-Methyl-5-pentyl-1,2,4-trithiolaneCCCCCC1SSC(C)S11493.2Standard non polar33892256
3-Methyl-5-pentyl-1,2,4-trithiolaneCCCCCC1SSC(C)S11579.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane GC-MS (Non-derivatized) - 70eV, Positivesplash10-002o-9700000000-dbc948c7b4f47b5abb782017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 10V, Positive-QTOFsplash10-0a4i-2190000000-f66c2084dbe47d20926f2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 20V, Positive-QTOFsplash10-0bu1-9850000000-53f4a6c3194a4fa2df972017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 40V, Positive-QTOFsplash10-0973-9000000000-658bd096f5075af1d3a22017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 10V, Negative-QTOFsplash10-0007-9800000000-53c0a212785171b6349b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 20V, Negative-QTOFsplash10-052f-9400000000-e80b84a00307222285e72017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 40V, Negative-QTOFsplash10-0a59-9100000000-c5764eeb54dbde5a14282017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 10V, Negative-QTOFsplash10-0a4i-1090000000-43e95c8d027426435d862021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 20V, Negative-QTOFsplash10-0006-9000000000-0589b6a3917e88e178282021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 40V, Negative-QTOFsplash10-01ox-9400000000-b70ceaf44559e425422f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 10V, Positive-QTOFsplash10-0a4i-0190000000-9b64c9d4989221f1a74b2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 20V, Positive-QTOFsplash10-0a4i-9340000000-03c9f168d4c9aea6342f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Methyl-5-pentyl-1,2,4-trithiolane 40V, Positive-QTOFsplash10-01ox-9100000000-9b711e51223e8875ecde2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019957
KNApSAcK IDNot Available
Chemspider ID20035934
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound22212051
PDB IDNot Available
ChEBI ID174033
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1120011
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .