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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2013-05-09 20:59:22 UTC

Update Date

2022-10-24 19:44:13 UTC

HMDB ID

HMDB0060158

Secondary Accession Numbers

HMDB60158

Metabolite Identification

Common Name

Tetracosatetraenoyl carnitine

Description

Tetracosatetraenoyl carnitine is an acylcarnitine. More specifically, it is an tetracosatetraenoic acid ester of carnitine. Acylcarnitines were first discovered more than 70 year ago (PMID: 13825279 ). It is believed that there are more than 1000 types of acylcarnitines in the human body. The general role of acylcarnitines is to transport acyl-groups (organic acids and fatty acids) from the cytoplasm into the mitochondria so that they can be broken down to produce energy. This process is known as beta-oxidation. According to a recent review (PMID: 35710135 ), acylcarnitines (ACs) can be classified into 9 different categories depending on the type and size of their acyl-group: 1) short-chain ACs; 2) medium-chain ACs; 3) long-chain ACs; 4) very long-chain ACs; 5) hydroxy ACs; 6) branched chain ACs; 7) unsaturated ACs; 8) dicarboxylic ACs and 9) miscellaneous ACs. Short-chain ACs have acyl-groups with two to five carbons (C2-C5), medium-chain ACs have acyl-groups with six to thirteen carbons (C6-C13), long-chain ACs have acyl-groups with fourteen to twenty once carbons (C14-C21) and very long-chain ACs have acyl groups with more than 22 carbons. Tetracosatetraenoyl carnitine is therefore classified as a very-long chain AC. As a very long-chain acylcarnitine tetracosatetraenoyl carnitine is generally formed in the cytoplasm from very long acyl groups synthesized by fatty acid synthases or obtained from the diet. Very-long-chain fatty acids are generally too long to be involved in mitochondrial beta-oxidation. As a result peroxisomes are the main organelle where very-long-chain fatty acids are metabolized and their acylcarnitines synthesized (PMID: 18793625 ). Altered levels of very long-chain acylcarnitines can serve as useful markers for inherited disorders of peroxisomal metabolism. The study of acylcarnitines is an active area of research and it is likely that many novel acylcarnitines will be discovered in the coming years. It is also likely that many novel roles in health and disease will be uncovered. An excellent review of the current state of knowledge for acylcarnitines is available (PMID: 35710135 ).

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

  Mrv0541 05091313592D          

 36 35  0  0  0  0            999 V2000
    2.8066    6.5704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0947    1.2079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2697    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9197    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8066    5.7454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0921    5.3329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0921    4.5079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    4.0954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6632    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6632    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    1.6204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    0.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0921    0.3829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8066    0.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5211    0.3829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2355    0.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2355    1.6204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9500    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9500    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6645    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3789    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0934    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8079    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5224    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2368    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3802    4.0954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0947    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3802    3.2704    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   12.0947    4.5079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9513    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0947    2.0329    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   12.0947    5.3329    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.8092    4.0954    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    9.9513    4.0954    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6658    2.8579    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  1  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  9  8  1  0  0  0  0
 10  9  2  0  0  0  0
 10 11  1  4  0  0  0
 12 11  1  0  0  0  0
 13 12  2  0  0  0  0
 13 14  1  4  0  0  0
 15 14  1  0  0  0  0
 16 15  2  0  0  0  0
 16 17  1  4  0  0  0
 18 17  1  0  0  0  0
 19 18  2  0  0  0  0
 19 20  1  4  0  0  0
 21 20  1  0  0  0  0
 22 21  1  0  0  0  0
 23 22  1  0  0  0  0
 24 23  1  0  0  0  0
 25 24  1  0  0  0  0
 26 25  1  0  0  0  0
 29 27  1  0  0  0  0
 29 28  1  0  0  0  0
 30 27  1  0  0  0  0
 31 26  1  0  0  0  0
 32  2  1  0  0  0  0
 32  3  1  0  0  0  0
 32  4  1  0  0  0  0
 32 28  1  0  0  0  0
 33 30  2  0  0  0  0
 34 30  1  0  0  0  0
 35 31  2  0  0  0  0
 29 36  1  1  0  0  0
 36 31  1  0  0  0  0
M  CHG  2  32   1  34  -1
M  END

HMDB0060158
     RDKit          3D
Tetracosatetraenoyl carnitine
 89 88  0  0  0  0  0  0  0  0999 V2000
   12.9231    1.0094    2.6758 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2939    0.6078    1.2525 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1194   -0.1735    0.6546 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8930    0.6767    0.6373 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7142   -0.1023    0.0520 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0017   -0.5217   -1.3177 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4444   -0.2538   -2.4441 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2965    0.5851   -2.8198 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7058    1.2971   -1.7050 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4815    1.1483   -1.2716 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5099    0.2032   -1.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0585   -0.8012   -0.8965 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8649   -1.0062   -0.5106 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6624   -0.2877   -0.9623 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7477   -1.3052   -1.5569 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5654   -1.5381   -1.1078 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0744   -0.8731    0.0264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3304   -0.1920   -0.5053 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0065    0.5049    0.6259 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4363   -0.3668    1.7558 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4182   -1.4352    1.3437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6683   -0.8073    0.7636 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6732   -1.8509    0.3442 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8975   -1.2328   -0.2298 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8884   -0.8634   -1.4538 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0516   -1.0295    0.4761 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2399   -0.4348   -0.0811 C   0  0  1  0  0  0  0  0  0  0  0  0
  -10.3548   -1.3941    0.2020 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0675   -2.6936   -0.4299 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0603   -2.9802   -1.1048 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0273   -3.7080   -0.2511 O   0  0  0  0  0  1  0  0  0  0  0  0
   -9.3853    0.8583    0.6941 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4848    1.6771    0.3602 N   0  0  0  0  0  4  0  0  0  0  0  0
  -11.5259    1.5152    1.3904 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0323    3.0699    0.5605 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0115    1.6003   -0.9526 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1012    0.3634    3.0349 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.6354    2.0799    2.6538 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8371    0.9001    3.2854 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1554   -0.0716    1.2565 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.4786    1.4854    0.6346 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.0050   -1.0809    1.2569 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.4613   -0.4316   -0.3858 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6166    0.9527    1.6642 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.0531    1.5783    0.0273 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6429   -1.0563    0.7082 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7925    0.4321    0.2504 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8956   -1.2263   -1.3664 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9411   -0.7721   -3.3337 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6650    1.3901   -3.5525 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5548    0.0167   -3.4259 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3337    2.0770   -1.1789 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1306    1.7481   -0.4056 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8436   -0.2830   -2.7999 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6679    0.8839   -2.2318 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8767   -1.4228   -0.4699 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6731   -1.7979    0.2403 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1803    0.2881   -0.1616 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8935    0.3941   -1.8426 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1017   -1.8963   -2.4353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0497   -2.3155   -1.6124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4034   -1.6864    0.7466 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5172   -0.1580    0.5991 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0831    0.5454   -1.2735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9435   -0.9740   -0.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8193    1.1395    0.2196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2595    1.2347    1.0521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5574   -0.8564    2.1955 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9724    0.2811    2.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6500   -2.0291    2.2507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9774   -2.1365    0.6110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4335   -0.0897   -0.0430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1448   -0.2087    1.5752 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2203   -2.4746   -0.4454 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9002   -2.4816    1.2240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0002   -0.2610   -1.1308 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3862   -1.5499    1.3017 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3332   -1.0629   -0.2002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3800    0.5760    1.7724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4079    1.4045    0.5453 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0646    1.9157    2.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3634    2.1704    1.1052 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7822    0.4759    1.5780 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1069    3.2671   -0.0020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9186    3.2968    1.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8094    3.7750    0.1596 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.2256    2.6191   -1.3374 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4748    1.0083   -1.6855 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0343    1.1219   -0.8659 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  3
  7  8  1  0
  8  9  1  0
  9 10  2  3
 10 11  1  0
 11 12  1  0
 12 13  2  3
 13 14  1  0
 14 15  1  0
 15 16  2  3
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 27 32  1  0
 32 33  1  0
 33 34  1  0
 33 35  1  0
 33 36  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  2 40  1  0
  2 41  1  0
  3 42  1  0
  3 43  1  0
  4 44  1  0
  4 45  1  0
  5 46  1  0
  5 47  1  0
  6 48  1  0
  7 49  1  0
  8 50  1  0
  8 51  1  0
  9 52  1  0
 10 53  1  0
 11 54  1  0
 11 55  1  0
 12 56  1  0
 13 57  1  0
 14 58  1  0
 14 59  1  0
 15 60  1  0
 16 61  1  0
 17 62  1  0
 17 63  1  0
 18 64  1  0
 18 65  1  0
 19 66  1  0
 19 67  1  0
 20 68  1  0
 20 69  1  0
 21 70  1  0
 21 71  1  0
 22 72  1  0
 22 73  1  0
 23 74  1  0
 23 75  1  0
 27 76  1  6
 28 77  1  0
 28 78  1  0
 32 79  1  0
 32 80  1  0
 34 81  1  0
 34 82  1  0
 34 83  1  0
 35 84  1  0
 35 85  1  0
 35 86  1  0
 36 87  1  0
 36 88  1  0
 36 89  1  0
M  CHG  2  31  -1  33   1
M  END

  Mrv0541 05091313592D          

 36 35  0  0  0  0            999 V2000
    2.8066    6.5704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0947    1.2079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2697    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9197    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8066    5.7454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0921    5.3329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0921    4.5079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    4.0954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6632    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6632    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    1.6204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3776    0.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0921    0.3829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8066    0.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5211    0.3829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2355    0.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2355    1.6204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9500    2.0329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9500    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6645    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3789    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0934    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8079    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5224    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2368    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3802    4.0954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0947    2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3802    3.2704    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   12.0947    4.5079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9513    3.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0947    2.0329    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   12.0947    5.3329    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.8092    4.0954    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    9.9513    4.0954    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6658    2.8579    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  1  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  9  8  1  0  0  0  0
 10  9  2  0  0  0  0
 10 11  1  4  0  0  0
 12 11  1  0  0  0  0
 13 12  2  0  0  0  0
 13 14  1  4  0  0  0
 15 14  1  0  0  0  0
 16 15  2  0  0  0  0
 16 17  1  4  0  0  0
 18 17  1  0  0  0  0
 19 18  2  0  0  0  0
 19 20  1  4  0  0  0
 21 20  1  0  0  0  0
 22 21  1  0  0  0  0
 23 22  1  0  0  0  0
 24 23  1  0  0  0  0
 25 24  1  0  0  0  0
 26 25  1  0  0  0  0
 29 27  1  0  0  0  0
 29 28  1  0  0  0  0
 30 27  1  0  0  0  0
 31 26  1  0  0  0  0
 32  2  1  0  0  0  0
 32  3  1  0  0  0  0
 32  4  1  0  0  0  0
 32 28  1  0  0  0  0
 33 30  2  0  0  0  0
 34 30  1  0  0  0  0
 35 31  2  0  0  0  0
 29 36  1  1  0  0  0
 36 31  1  0  0  0  0
M  CHG  2  32   1  34  -1
M  END
> <DATABASE_ID>
HMDB0060158

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCCC=CCC=CCC=CCC=CCCCCCCCC(=O)O[C@@H](CC([O-])=O)C[N+](C)(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C31H53NO4/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-23-24-25-26-31(35)36-29(27-30(33)34)28-32(2,3)4/h9-10,12-13,15-16,18-19,29H,5-8,11,14,17,20-28H2,1-4H3/t29-/m0/s1

> <INCHI_KEY>
OVCKQONNZPULLZ-LJAQVGFWSA-N

> <FORMULA>
C31H53NO4

> <MOLECULAR_WEIGHT>
503.7568

> <EXACT_MASS>
503.397459189

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
61.506681801826005

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S)-3-(tetracosa-9,12,15,18-tetraenoyloxy)-4-(trimethylazaniumyl)butanoate

> <ALOGPS_LOGP>
3.25

> <JCHEM_LOGP>
4.142410547528254

> <ALOGPS_LOGS>
-7.97

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.216763902737658

> <JCHEM_PKA_STRONGEST_BASIC>
-7.057186892022398

> <JCHEM_POLAR_SURFACE_AREA>
66.42999999999999

> <JCHEM_REFRACTIVITY>
178.35110000000006

> <JCHEM_ROTATABLE_BOND_COUNT>
24

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.98e-06 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S)-3-(tetracosa-9,12,15,18-tetraenoyloxy)-4-(trimethylammonio)butanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0060158
     RDKit          3D
Tetracosatetraenoyl carnitine
 89 88  0  0  0  0  0  0  0  0999 V2000
   12.9231    1.0094    2.6758 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2939    0.6078    1.2525 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1194   -0.1735    0.6546 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8930    0.6767    0.6373 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7142   -0.1023    0.0520 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0017   -0.5217   -1.3177 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4444   -0.2538   -2.4441 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2965    0.5851   -2.8198 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7058    1.2971   -1.7050 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4815    1.1483   -1.2716 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5099    0.2032   -1.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0585   -0.8012   -0.8965 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8649   -1.0062   -0.5106 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6624   -0.2877   -0.9623 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7477   -1.3052   -1.5569 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5654   -1.5381   -1.1078 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0744   -0.8731    0.0264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3304   -0.1920   -0.5053 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0065    0.5049    0.6259 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4363   -0.3668    1.7558 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4182   -1.4352    1.3437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6683   -0.8073    0.7636 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6732   -1.8509    0.3442 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8975   -1.2328   -0.2298 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8884   -0.8634   -1.4538 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0516   -1.0295    0.4761 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2399   -0.4348   -0.0811 C   0  0  1  0  0  0  0  0  0  0  0  0
  -10.3548   -1.3941    0.2020 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0675   -2.6936   -0.4299 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0603   -2.9802   -1.1048 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0273   -3.7080   -0.2511 O   0  0  0  0  0  1  0  0  0  0  0  0
   -9.3853    0.8583    0.6941 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4848    1.6771    0.3602 N   0  0  0  0  0  4  0  0  0  0  0  0
  -11.5259    1.5152    1.3904 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0323    3.0699    0.5605 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0115    1.6003   -0.9526 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1012    0.3634    3.0349 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.6354    2.0799    2.6538 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8371    0.9001    3.2854 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1554   -0.0716    1.2565 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.4786    1.4854    0.6346 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.0050   -1.0809    1.2569 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.4613   -0.4316   -0.3858 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6166    0.9527    1.6642 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.0531    1.5783    0.0273 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6429   -1.0563    0.7082 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7925    0.4321    0.2504 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8956   -1.2263   -1.3664 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9411   -0.7721   -3.3337 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6650    1.3901   -3.5525 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5548    0.0167   -3.4259 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3337    2.0770   -1.1789 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1306    1.7481   -0.4056 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8436   -0.2830   -2.7999 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6679    0.8839   -2.2318 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8767   -1.4228   -0.4699 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6731   -1.7979    0.2403 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1803    0.2881   -0.1616 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8935    0.3941   -1.8426 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1017   -1.8963   -2.4353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0497   -2.3155   -1.6124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4034   -1.6864    0.7466 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5172   -0.1580    0.5991 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0831    0.5454   -1.2735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9435   -0.9740   -0.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8193    1.1395    0.2196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2595    1.2347    1.0521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5574   -0.8564    2.1955 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9724    0.2811    2.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6500   -2.0291    2.2507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9774   -2.1365    0.6110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4335   -0.0897   -0.0430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1448   -0.2087    1.5752 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2203   -2.4746   -0.4454 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9002   -2.4816    1.2240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0002   -0.2610   -1.1308 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3862   -1.5499    1.3017 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3332   -1.0629   -0.2002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3800    0.5760    1.7724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4079    1.4045    0.5453 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0646    1.9157    2.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3634    2.1704    1.1052 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7822    0.4759    1.5780 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1069    3.2671   -0.0020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9186    3.2968    1.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8094    3.7750    0.1596 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.2256    2.6191   -1.3374 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4748    1.0083   -1.6855 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0343    1.1219   -0.8659 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  3
  7  8  1  0
  8  9  1  0
  9 10  2  3
 10 11  1  0
 11 12  1  0
 12 13  2  3
 13 14  1  0
 14 15  1  0
 15 16  2  3
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 27 32  1  0
 32 33  1  0
 33 34  1  0
 33 35  1  0
 33 36  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  2 40  1  0
  2 41  1  0
  3 42  1  0
  3 43  1  0
  4 44  1  0
  4 45  1  0
  5 46  1  0
  5 47  1  0
  6 48  1  0
  7 49  1  0
  8 50  1  0
  8 51  1  0
  9 52  1  0
 10 53  1  0
 11 54  1  0
 11 55  1  0
 12 56  1  0
 13 57  1  0
 14 58  1  0
 14 59  1  0
 15 60  1  0
 16 61  1  0
 17 62  1  0
 17 63  1  0
 18 64  1  0
 18 65  1  0
 19 66  1  0
 19 67  1  0
 20 68  1  0
 20 69  1  0
 21 70  1  0
 21 71  1  0
 22 72  1  0
 22 73  1  0
 23 74  1  0
 23 75  1  0
 27 76  1  6
 28 77  1  0
 28 78  1  0
 32 79  1  0
 32 80  1  0
 34 81  1  0
 34 82  1  0
 34 83  1  0
 35 84  1  0
 35 85  1  0
 35 86  1  0
 36 87  1  0
 36 88  1  0
 36 89  1  0
M  CHG  2  31  -1  33   1
M  END

HEADER    PROTEIN                                 09-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-MAY-13         0                                  
HETATM    1  C   UNK     0       5.239  12.265   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      22.577   2.255   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      21.037   3.795   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      24.117   3.795   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.239  10.725   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.905   9.955   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.905   8.415   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.572   7.645   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.572   6.105   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.238   5.335   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.238   3.795   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.572   3.025   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.572   1.485   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.905   0.715   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.239   1.485   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.573   0.715   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.906   1.485   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.906   3.025   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.240   3.795   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       9.240   5.335   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      10.574   6.105   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      11.907   5.335   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      13.241   6.105   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      14.575   5.335   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      15.908   6.105   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      17.242   5.335   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      21.243   7.645   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      22.577   5.335   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      21.243   6.105   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      22.577   8.415   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      18.576   6.105   0.000  0.00  0.00           C+0
HETATM   32  N   UNK     0      22.577   3.795   0.000  0.00  0.00           N+1
HETATM   33  O   UNK     0      22.577   9.955   0.000  0.00  0.00           O+0
HETATM   34  O   UNK     0      23.911   7.645   0.000  0.00  0.00           O-1
HETATM   35  O   UNK     0      18.576   7.645   0.000  0.00  0.00           O+0
HETATM   36  O   UNK     0      19.909   5.335   0.000  0.00  0.00           O+0
CONECT    1    5                                                            
CONECT    2   32                                                            
CONECT    3   32                                                            
CONECT    4   32                                                            
CONECT    5    1    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   31                                                       
CONECT   27   29   30                                                       
CONECT   28   29   32                                                       
CONECT   29   27   28   36                                                  
CONECT   30   27   33   34                                                  
CONECT   31   26   35   36                                                  
CONECT   32    2    3    4   28                                             
CONECT   33   30                                                            
CONECT   34   30                                                            
CONECT   35   31                                                            
CONECT   36   29   31                                                       
MASTER        0    0    0    0    0    0    0    0   36    0   70    0
END

COMPND    HMDB0060158
HETATM    1  C1  UNL     1      12.923   1.009   2.676  1.00  0.00           C  
HETATM    2  C2  UNL     1      13.294   0.608   1.252  1.00  0.00           C  
HETATM    3  C3  UNL     1      12.119  -0.174   0.655  1.00  0.00           C  
HETATM    4  C4  UNL     1      10.893   0.677   0.637  1.00  0.00           C  
HETATM    5  C5  UNL     1       9.714  -0.102   0.052  1.00  0.00           C  
HETATM    6  C6  UNL     1      10.002  -0.522  -1.318  1.00  0.00           C  
HETATM    7  C7  UNL     1       9.444  -0.254  -2.444  1.00  0.00           C  
HETATM    8  C8  UNL     1       8.296   0.585  -2.820  1.00  0.00           C  
HETATM    9  C9  UNL     1       7.706   1.297  -1.705  1.00  0.00           C  
HETATM   10  C10 UNL     1       6.482   1.148  -1.272  1.00  0.00           C  
HETATM   11  C11 UNL     1       5.510   0.203  -1.883  1.00  0.00           C  
HETATM   12  C12 UNL     1       5.058  -0.801  -0.897  1.00  0.00           C  
HETATM   13  C13 UNL     1       3.865  -1.006  -0.511  1.00  0.00           C  
HETATM   14  C14 UNL     1       2.662  -0.288  -0.962  1.00  0.00           C  
HETATM   15  C15 UNL     1       1.748  -1.305  -1.557  1.00  0.00           C  
HETATM   16  C16 UNL     1       0.565  -1.538  -1.108  1.00  0.00           C  
HETATM   17  C17 UNL     1      -0.074  -0.873   0.026  1.00  0.00           C  
HETATM   18  C18 UNL     1      -1.330  -0.192  -0.505  1.00  0.00           C  
HETATM   19  C19 UNL     1      -2.006   0.505   0.626  1.00  0.00           C  
HETATM   20  C20 UNL     1      -2.436  -0.367   1.756  1.00  0.00           C  
HETATM   21  C21 UNL     1      -3.418  -1.435   1.344  1.00  0.00           C  
HETATM   22  C22 UNL     1      -4.668  -0.807   0.764  1.00  0.00           C  
HETATM   23  C23 UNL     1      -5.673  -1.851   0.344  1.00  0.00           C  
HETATM   24  C24 UNL     1      -6.898  -1.233  -0.230  1.00  0.00           C  
HETATM   25  O1  UNL     1      -6.888  -0.863  -1.454  1.00  0.00           O  
HETATM   26  O2  UNL     1      -8.052  -1.029   0.476  1.00  0.00           O  
HETATM   27  C25 UNL     1      -9.240  -0.435  -0.081  1.00  0.00           C  
HETATM   28  C26 UNL     1     -10.355  -1.394   0.202  1.00  0.00           C  
HETATM   29  C27 UNL     1     -10.067  -2.694  -0.430  1.00  0.00           C  
HETATM   30  O3  UNL     1      -9.060  -2.980  -1.105  1.00  0.00           O  
HETATM   31  O4  UNL     1     -11.027  -3.708  -0.251  1.00  0.00           O1-
HETATM   32  C28 UNL     1      -9.385   0.858   0.694  1.00  0.00           C  
HETATM   33  N1  UNL     1     -10.485   1.677   0.360  1.00  0.00           N1+
HETATM   34  C29 UNL     1     -11.526   1.515   1.390  1.00  0.00           C  
HETATM   35  C30 UNL     1     -10.032   3.070   0.560  1.00  0.00           C  
HETATM   36  C31 UNL     1     -11.011   1.600  -0.953  1.00  0.00           C  
HETATM   37  H1  UNL     1      12.101   0.363   3.035  1.00  0.00           H  
HETATM   38  H2  UNL     1      12.635   2.080   2.654  1.00  0.00           H  
HETATM   39  H3  UNL     1      13.837   0.900   3.285  1.00  0.00           H  
HETATM   40  H4  UNL     1      14.155  -0.072   1.257  1.00  0.00           H  
HETATM   41  H5  UNL     1      13.479   1.485   0.635  1.00  0.00           H  
HETATM   42  H6  UNL     1      12.005  -1.081   1.257  1.00  0.00           H  
HETATM   43  H7  UNL     1      12.461  -0.432  -0.386  1.00  0.00           H  
HETATM   44  H8  UNL     1      10.617   0.953   1.664  1.00  0.00           H  
HETATM   45  H9  UNL     1      11.053   1.578   0.027  1.00  0.00           H  
HETATM   46  H10 UNL     1       9.643  -1.056   0.708  1.00  0.00           H  
HETATM   47  H11 UNL     1       8.793   0.432   0.250  1.00  0.00           H  
HETATM   48  H12 UNL     1      10.896  -1.226  -1.366  1.00  0.00           H  
HETATM   49  H13 UNL     1       9.941  -0.772  -3.334  1.00  0.00           H  
HETATM   50  H14 UNL     1       8.665   1.390  -3.553  1.00  0.00           H  
HETATM   51  H15 UNL     1       7.555   0.017  -3.426  1.00  0.00           H  
HETATM   52  H16 UNL     1       8.334   2.077  -1.179  1.00  0.00           H  
HETATM   53  H17 UNL     1       6.131   1.748  -0.406  1.00  0.00           H  
HETATM   54  H18 UNL     1       5.844  -0.283  -2.800  1.00  0.00           H  
HETATM   55  H19 UNL     1       4.668   0.884  -2.232  1.00  0.00           H  
HETATM   56  H20 UNL     1       5.877  -1.423  -0.470  1.00  0.00           H  
HETATM   57  H21 UNL     1       3.673  -1.798   0.240  1.00  0.00           H  
HETATM   58  H22 UNL     1       2.180   0.288  -0.162  1.00  0.00           H  
HETATM   59  H23 UNL     1       2.894   0.394  -1.843  1.00  0.00           H  
HETATM   60  H24 UNL     1       2.102  -1.896  -2.435  1.00  0.00           H  
HETATM   61  H25 UNL     1      -0.050  -2.315  -1.612  1.00  0.00           H  
HETATM   62  H26 UNL     1      -0.403  -1.686   0.747  1.00  0.00           H  
HETATM   63  H27 UNL     1       0.517  -0.158   0.599  1.00  0.00           H  
HETATM   64  H28 UNL     1      -1.083   0.545  -1.273  1.00  0.00           H  
HETATM   65  H29 UNL     1      -1.943  -0.974  -0.978  1.00  0.00           H  
HETATM   66  H30 UNL     1      -2.819   1.139   0.220  1.00  0.00           H  
HETATM   67  H31 UNL     1      -1.260   1.235   1.052  1.00  0.00           H  
HETATM   68  H32 UNL     1      -1.557  -0.856   2.195  1.00  0.00           H  
HETATM   69  H33 UNL     1      -2.972   0.281   2.486  1.00  0.00           H  
HETATM   70  H34 UNL     1      -3.650  -2.029   2.251  1.00  0.00           H  
HETATM   71  H35 UNL     1      -2.977  -2.136   0.611  1.00  0.00           H  
HETATM   72  H36 UNL     1      -4.433  -0.090  -0.043  1.00  0.00           H  
HETATM   73  H37 UNL     1      -5.145  -0.209   1.575  1.00  0.00           H  
HETATM   74  H38 UNL     1      -5.220  -2.475  -0.445  1.00  0.00           H  
HETATM   75  H39 UNL     1      -5.900  -2.482   1.224  1.00  0.00           H  
HETATM   76  H40 UNL     1      -9.000  -0.261  -1.131  1.00  0.00           H  
HETATM   77  H41 UNL     1     -10.386  -1.550   1.302  1.00  0.00           H  
HETATM   78  H42 UNL     1     -11.333  -1.063  -0.200  1.00  0.00           H  
HETATM   79  H43 UNL     1      -9.380   0.576   1.772  1.00  0.00           H  
HETATM   80  H44 UNL     1      -8.408   1.404   0.545  1.00  0.00           H  
HETATM   81  H45 UNL     1     -11.065   1.916   2.328  1.00  0.00           H  
HETATM   82  H46 UNL     1     -12.363   2.170   1.105  1.00  0.00           H  
HETATM   83  H47 UNL     1     -11.782   0.476   1.578  1.00  0.00           H  
HETATM   84  H48 UNL     1      -9.107   3.267  -0.002  1.00  0.00           H  
HETATM   85  H49 UNL     1      -9.919   3.297   1.628  1.00  0.00           H  
HETATM   86  H50 UNL     1     -10.809   3.775   0.160  1.00  0.00           H  
HETATM   87  H51 UNL     1     -11.226   2.619  -1.337  1.00  0.00           H  
HETATM   88  H52 UNL     1     -10.475   1.008  -1.685  1.00  0.00           H  
HETATM   89  H53 UNL     1     -12.034   1.122  -0.866  1.00  0.00           H  
CONECT    1    2   37   38   39
CONECT    2    3   40   41
CONECT    3    4   42   43
CONECT    4    5   44   45
CONECT    5    6   46   47
CONECT    6    7    7   48
CONECT    7    8   49
CONECT    8    9   50   51
CONECT    9   10   10   52
CONECT   10   11   53
CONECT   11   12   54   55
CONECT   12   13   13   56
CONECT   13   14   57
CONECT   14   15   58   59
CONECT   15   16   16   60
CONECT   16   17   61
CONECT   17   18   62   63
CONECT   18   19   64   65
CONECT   19   20   66   67
CONECT   20   21   68   69
CONECT   21   22   70   71
CONECT   22   23   72   73
CONECT   23   24   74   75
CONECT   24   25   25   26
CONECT   26   27
CONECT   27   28   32   76
CONECT   28   29   77   78
CONECT   29   30   30   31
CONECT   32   33   79   80
CONECT   33   34   35   36
CONECT   34   81   82   83
CONECT   35   84   85   86
CONECT   36   87   88   89
END

HMDB0060158
     RDKit          3D
Tetracosatetraenoyl carnitine
 89 88  0  0  0  0  0  0  0  0999 V2000
   12.9231    1.0094    2.6758 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2939    0.6078    1.2525 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1194   -0.1735    0.6546 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8930    0.6767    0.6373 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7142   -0.1023    0.0520 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0017   -0.5217   -1.3177 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4444   -0.2538   -2.4441 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2965    0.5851   -2.8198 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7058    1.2971   -1.7050 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4815    1.1483   -1.2716 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5099    0.2032   -1.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0585   -0.8012   -0.8965 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8649   -1.0062   -0.5106 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6624   -0.2877   -0.9623 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7477   -1.3052   -1.5569 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5654   -1.5381   -1.1078 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0744   -0.8731    0.0264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3304   -0.1920   -0.5053 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0065    0.5049    0.6259 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4363   -0.3668    1.7558 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4182   -1.4352    1.3437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6683   -0.8073    0.7636 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6732   -1.8509    0.3442 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8975   -1.2328   -0.2298 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8884   -0.8634   -1.4538 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0516   -1.0295    0.4761 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2399   -0.4348   -0.0811 C   0  0  1  0  0  0  0  0  0  0  0  0
  -10.3548   -1.3941    0.2020 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0675   -2.6936   -0.4299 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0603   -2.9802   -1.1048 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0273   -3.7080   -0.2511 O   0  0  0  0  0  1  0  0  0  0  0  0
   -9.3853    0.8583    0.6941 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4848    1.6771    0.3602 N   0  0  0  0  0  4  0  0  0  0  0  0
  -11.5259    1.5152    1.3904 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0323    3.0699    0.5605 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0115    1.6003   -0.9526 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1012    0.3634    3.0349 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.6354    2.0799    2.6538 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8371    0.9001    3.2854 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1554   -0.0716    1.2565 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.4786    1.4854    0.6346 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.0050   -1.0809    1.2569 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.4613   -0.4316   -0.3858 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6166    0.9527    1.6642 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.0531    1.5783    0.0273 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6429   -1.0563    0.7082 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7925    0.4321    0.2504 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8956   -1.2263   -1.3664 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9411   -0.7721   -3.3337 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6650    1.3901   -3.5525 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5548    0.0167   -3.4259 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3337    2.0770   -1.1789 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1306    1.7481   -0.4056 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8436   -0.2830   -2.7999 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6679    0.8839   -2.2318 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8767   -1.4228   -0.4699 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6731   -1.7979    0.2403 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1803    0.2881   -0.1616 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8935    0.3941   -1.8426 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1017   -1.8963   -2.4353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0497   -2.3155   -1.6124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4034   -1.6864    0.7466 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5172   -0.1580    0.5991 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0831    0.5454   -1.2735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9435   -0.9740   -0.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8193    1.1395    0.2196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2595    1.2347    1.0521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5574   -0.8564    2.1955 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9724    0.2811    2.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6500   -2.0291    2.2507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9774   -2.1365    0.6110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4335   -0.0897   -0.0430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1448   -0.2087    1.5752 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2203   -2.4746   -0.4454 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9002   -2.4816    1.2240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0002   -0.2610   -1.1308 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3862   -1.5499    1.3017 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3332   -1.0629   -0.2002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3800    0.5760    1.7724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4079    1.4045    0.5453 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0646    1.9157    2.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3634    2.1704    1.1052 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7822    0.4759    1.5780 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1069    3.2671   -0.0020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9186    3.2968    1.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8094    3.7750    0.1596 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.2256    2.6191   -1.3374 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4748    1.0083   -1.6855 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0343    1.1219   -0.8659 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  3
  7  8  1  0
  8  9  1  0
  9 10  2  3
 10 11  1  0
 11 12  1  0
 12 13  2  3
 13 14  1  0
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 15 16  2  3
 16 17  1  0
 17 18  1  0
 18 19  1  0
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  1 37  1  0
  1 38  1  0
  1 39  1  0
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  7 49  1  0
  8 50  1  0
  8 51  1  0
  9 52  1  0
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 34 83  1  0
 35 84  1  0
 35 85  1  0
 35 86  1  0
 36 87  1  0
 36 88  1  0
 36 89  1  0
M  CHG  2  31  -1  33   1
M  END

View in JSmol View Stereo Labels

Synonyms

Not Available

Chemical Formula

C₃₁H₅₃NO₄

Average Molecular Weight

503.7568

Monoisotopic Molecular Weight

503.397459189

IUPAC Name

(3S)-3-(tetracosa-9,12,15,18-tetraenoyloxy)-4-(trimethylazaniumyl)butanoate

Traditional Name

(3S)-3-(tetracosa-9,12,15,18-tetraenoyloxy)-4-(trimethylammonio)butanoate

CAS Registry Number

Not Available

SMILES

CCCCCC=CCC=CCC=CCC=CCCCCCCCC(=O)O[C@@H](CC([O-])=O)C[N+](C)(C)C

InChI Identifier

InChI=1S/C31H53NO4/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-23-24-25-26-31(35)36-29(27-30(33)34)28-32(2,3)4/h9-10,12-13,15-16,18-19,29H,5-8,11,14,17,20-28H2,1-4H3/t29-/m0/s1

InChI Key

OVCKQONNZPULLZ-LJAQVGFWSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as acyl carnitines. These are organic compounds containing a fatty acid with the carboxylic acid attached to carnitine through an ester bond.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acid esters

Direct Parent

Acyl carnitines

Alternative Parents

Substituents

Acyl-carnitine
Dicarboxylic acid or derivatives
Tetraalkylammonium salt
Quaternary ammonium salt
Carboxylic acid ester
Carboxylic acid salt
Carboxylic acid derivative
Carboxylic acid
Organic nitrogen compound
Organooxygen compound
Organonitrogen compound
Organic salt
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organic oxygen compound
Carbonyl group
Amine
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 35710135)

Cellular substructure

Organelle

Peroxisome (PMID: 35710135)

Cell

All cells and tissues (PMID: 35710135)

Excreta

Biofluid or Excreta

Urine (PMID: 35710135)

Source

Exogenous

Exogenous (HMDB: HMDB0060158)

Process

Not Available

Role

Biological role

Energy source (PMID: 35710135)

Industrial application

Pharmaceutical industry

Biomarker

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	6.0e-06 g/L	ALOGPS
logP	3.25	ALOGPS
logP	4.14	ChemAxon
logS	-8	ALOGPS
pKa (Strongest Acidic)	4.22	ChemAxon
pKa (Strongest Basic)	-7.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	66.43 Å²	ChemAxon
Rotatable Bond Count	24	ChemAxon
Refractivity	178.35 m³·mol⁻¹	ChemAxon
Polarizability	61.51 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	248.305	30932474
DeepCCS	[M-H]-	245.045	30932474
DeepCCS	[M-2H]-	279.299	30932474
DeepCCS	[M+Na]+	255.802	30932474
AllCCS	[M+H]+	235.9	32859911
AllCCS	[M+H-H2O]+	234.4	32859911
AllCCS	[M+NH4]+	237.2	32859911
AllCCS	[M+Na]+	237.6	32859911
AllCCS	[M-H]-	229.7	32859911
AllCCS	[M+Na-2H]-	233.3	32859911
AllCCS	[M+HCOO]-	237.4	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Tetracosatetraenoyl carnitine	CCCCCC=CCC=CCC=CCC=CCCCCCCCC(=O)O[C@@H](CC([O-])=O)C[N+](C)(C)C	4021.5	Standard polar	33892256
Tetracosatetraenoyl carnitine	CCCCCC=CCC=CCC=CCC=CCCCCCCCC(=O)O[C@@H](CC([O-])=O)C[N+](C)(C)C	3086.8	Standard non polar	33892256
Tetracosatetraenoyl carnitine	CCCCCC=CCC=CCC=CCC=CCCCCCCCC(=O)O[C@@H](CC([O-])=O)C[N+](C)(C)C	3462.6	Semi standard non polar	33892256

Spectra

Biological Properties

Cellular Locations

Membrane (predicted from logP)

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Thiele I, Swainston N, Fleming RM, Hoppe A, Sahoo S, Aurich MK, Haraldsdottir H, Mo ML, Rolfsson O, Stobbe MD, Thorleifsson SG, Agren R, Bolling C, Bordel S, Chavali AK, Dobson P, Dunn WB, Endler L, Hala D, Hucka M, Hull D, Jameson D, Jamshidi N, Jonsson JJ, Juty N, Keating S, Nookaew I, Le Novere N, Malys N, Mazein A, Papin JA, Price ND, Selkov E Sr, Sigurdsson MI, Simeonidis E, Sonnenschein N, Smallbone K, Sorokin A, van Beek JH, Weichart D, Goryanin I, Nielsen J, Westerhoff HV, Kell DB, Mendes P, Palsson BO: A community-driven global reconstruction of human metabolism. Nat Biotechnol. 2013 May;31(5):419-25. doi: 10.1038/nbt.2488. Epub 2013 Mar 3. [PubMed:23455439 ]
Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
FRITZ IB: Action of carnitine on long chain fatty acid oxidation by liver. Am J Physiol. 1959 Aug;197:297-304. doi: 10.1152/ajplegacy.1959.197.2.297. [PubMed:13825279 ]
Duranti G, Boenzi S, Rizzo C, Rava L, Di Ciommo V, Carrozzo R, Meschini MC, Johnson DW, Dionisi-Vici C: Urine acylcarnitine analysis by ESI-MS/MS: a new tool for the diagnosis of peroxisomal biogenesis disorders. Clin Chim Acta. 2008 Dec;398(1-2):86-9. doi: 10.1016/j.cca.2008.08.018. Epub 2008 Aug 28. [PubMed:18793625 ]
Dambrova M, Makrecka-Kuka M, Kuka J, Vilskersts R, Nordberg D, Attwood MM, Smesny S, Sen ZD, Guo AC, Oler E, Tian S, Zheng J, Wishart DS, Liepinsh E, Schioth HB: Acylcarnitines: Nomenclature, Biomarkers, Therapeutic Potential, Drug Targets, and Clinical Trials. Pharmacol Rev. 2022 Jul;74(3):506-551. doi: 10.1124/pharmrev.121.000408. [PubMed:35710135 ]
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Tetracosatetraenoyl carnitine (HMDB0060158)

MOL for HMDB0060158 (Tetracosatetraenoyl carnitine)

3D MOL for HMDB0060158 (Tetracosatetraenoyl carnitine)

3D SDF for HMDB0060158 (Tetracosatetraenoyl carnitine)

3D-SDF for HMDB0060158 (Tetracosatetraenoyl carnitine)

PDB for HMDB0060158 (Tetracosatetraenoyl carnitine)

3D PDB for HMDB0060158 (Tetracosatetraenoyl carnitine)

SMILES for HMDB0060158 (Tetracosatetraenoyl carnitine)

INCHI for HMDB0060158 (Tetracosatetraenoyl carnitine)

Structure for HMDB0060158 (Tetracosatetraenoyl carnitine)

3D Structure for HMDB0060158 (Tetracosatetraenoyl carnitine)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized