Hmdb loader
Survey
You are using an unsupported browser. Please upgrade your browser to a newer version to get the best experience on Human Metabolome Database.
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-05-17 01:21:29 UTC
Update Date2022-03-07 03:17:45 UTC
HMDB IDHMDB0060447
Secondary Accession Numbers
  • HMDB60447
Metabolite Identification
Common NameBromobenzene-3,4-dihydrodiol
DescriptionBromobenzene-3,4-dihydrodiol belongs to the class of organic compounds known as 1,2-diols. These are polyols containing an alcohol group at two adjacent positions. Bromobenzene-3,4-dihydrodiol is an extremely weak basic (essentially neutral) compound (based on its pKa). Bromobenzene-3,4-dihydrodiol exists in all living organisms, ranging from bacteria to humans. These are organic compounds containing an aliphatic ring substituted with at least one hydroxyl group.
Structure
Data?1563866061
Synonyms
ValueSource
4-Bromo-3,5-cyclohexadiene-1,2-diolKegg
Chemical FormulaC6H7BrO2
Average Molecular Weight191.023
Monoisotopic Molecular Weight189.962942115
IUPAC Name4-bromocyclohexa-3,5-diene-1,2-diol
Traditional Namebromobenzene-3,4-dihydrodiol
CAS Registry NumberNot Available
SMILES
OC1C=CC(Br)=CC1O
InChI Identifier
InChI=1S/C6H7BrO2/c7-4-1-2-5(8)6(9)3-4/h1-3,5-6,8-9H
InChI KeyMWJZOLXUCNEWFL-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 1,2-diols. These are polyols containing an alcohol group at two adjacent positions.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassAlcohols and polyols
Direct Parent1,2-diols
Alternative Parents
Substituents
  • Secondary alcohol
  • 1,2-diol
  • Bromoalkene
  • Haloalkene
  • Vinyl halide
  • Vinyl bromide
  • Hydrocarbon derivative
  • Organobromide
  • Organohalogen compound
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility23.2 g/LALOGPS
logP0.47ALOGPS
logP0.2ChemAxon
logS-0.91ALOGPS
pKa (Strongest Acidic)13.43ChemAxon
pKa (Strongest Basic)-3.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity40.1 m³·mol⁻¹ChemAxon
Polarizability14.56 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+127.32330932474
DeepCCS[M-H]-124.75230932474
DeepCCS[M-2H]-161.34730932474
DeepCCS[M+Na]+136.07130932474
AllCCS[M+H]+141.632859911
AllCCS[M+H-H2O]+137.232859911
AllCCS[M+NH4]+145.632859911
AllCCS[M+Na]+146.832859911
AllCCS[M-H]-134.032859911
AllCCS[M+Na-2H]-136.332859911
AllCCS[M+HCOO]-138.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Bromobenzene-3,4-dihydrodiolOC1C=CC(Br)=CC1O2460.6Standard polar33892256
Bromobenzene-3,4-dihydrodiolOC1C=CC(Br)=CC1O1351.2Standard non polar33892256
Bromobenzene-3,4-dihydrodiolOC1C=CC(Br)=CC1O1367.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Bromobenzene-3,4-dihydrodiol,1TMS,isomer #1C[Si](C)(C)OC1C=CC(Br)=CC1O1505.5Semi standard non polar33892256
Bromobenzene-3,4-dihydrodiol,1TMS,isomer #2C[Si](C)(C)OC1C=C(Br)C=CC1O1509.4Semi standard non polar33892256
Bromobenzene-3,4-dihydrodiol,2TMS,isomer #1C[Si](C)(C)OC1C=CC(Br)=CC1O[Si](C)(C)C1577.2Semi standard non polar33892256
Bromobenzene-3,4-dihydrodiol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1C=CC(Br)=CC1O1760.0Semi standard non polar33892256
Bromobenzene-3,4-dihydrodiol,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1C=C(Br)C=CC1O1759.0Semi standard non polar33892256
Bromobenzene-3,4-dihydrodiol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1C=CC(Br)=CC1O[Si](C)(C)C(C)(C)C2019.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Bromobenzene-3,4-dihydrodiol GC-MS (Non-derivatized) - 70eV, Positivesplash10-054o-9500000000-eace1fd301db5c210bd62017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Bromobenzene-3,4-dihydrodiol GC-MS (2 TMS) - 70eV, Positivesplash10-0100-9371000000-65fc225f04066a0354d22017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Bromobenzene-3,4-dihydrodiol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Bromobenzene-3,4-dihydrodiol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bromobenzene-3,4-dihydrodiol 10V, Positive-QTOFsplash10-0006-0900000000-ff82f21814efde2e65e72017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bromobenzene-3,4-dihydrodiol 20V, Positive-QTOFsplash10-0006-1900000000-912b069ed79bc96d211b2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bromobenzene-3,4-dihydrodiol 40V, Positive-QTOFsplash10-0lkl-5900000000-27697748f8edd1c7ffd42017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bromobenzene-3,4-dihydrodiol 10V, Negative-QTOFsplash10-000i-0900000000-aa7bea4d7c013a808f782017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bromobenzene-3,4-dihydrodiol 20V, Negative-QTOFsplash10-000i-0900000000-6d9c0f7e6f2f88649d582017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bromobenzene-3,4-dihydrodiol 40V, Negative-QTOFsplash10-0pwc-4900000000-35733eafc14790ae965c2017-10-06Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDC14844
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound158239
PDB IDNot Available
ChEBI ID34588
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Magrane M: UniProt Knowledgebase: a hub of integrated protein data. Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011. [PubMed:21447597 ]

Enzymes

General function:
Involved in catalytic activity
Specific function:
Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water.
Gene Name:
EPHX1
Uniprot ID:
P07099
Molecular weight:
52948.48
Reactions
Bromobenzene-3,4-oxide + Water → Bromobenzene-3,4-dihydrodioldetails