Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-07-04 18:59:12 UTC
Update Date2019-07-23 07:15:05 UTC
HMDB IDHMDB0060784
Secondary Accession Numbers
  • HMDB60784
Metabolite Identification
Common Name6-beta-Naltrexol
Description6-beta-Naltrexol is a metabolite of naltrexone. Naltrexone is an opioid receptor antagonist used primarily in the management of alcohol dependence and opioid dependence. It is marketed in generic form as its hydrochloride salt, naltrexone hydrochloride, and marketed under the trade names Revia and Depade. In some countries including the United States, a once-monthly extended-release injectable formulation is marketed under the trade name Vivitrol. (Wikipedia)
Structure
Data?1563866105
Synonyms
ValueSource
6-b-NaltrexolGenerator
6-Β-naltrexolGenerator
Chemical FormulaC20H25NO4
Average Molecular Weight343.4168
Monoisotopic Molecular Weight343.178358293
IUPAC Name4-(cyclopropylmethyl)-12-oxa-4-azapentacyclo[9.6.1.0¹,¹³.0⁵,¹⁷.0⁷,¹⁸]octadeca-7(18),8,10-triene-10,14,17-triol
Traditional Name4-(cyclopropylmethyl)-12-oxa-4-azapentacyclo[9.6.1.0¹,¹³.0⁵,¹⁷.0⁷,¹⁸]octadeca-7(18),8,10-triene-10,14,17-triol
CAS Registry NumberNot Available
SMILES
OC1CCC2(O)C3CC4=C5C(OC1C25CCN3CC1CC1)=C(O)C=C4
InChI Identifier
InChI=1S/C20H25NO4/c22-13-4-3-12-9-15-20(24)6-5-14(23)18-19(20,16(12)17(13)25-18)7-8-21(15)10-11-1-2-11/h3-4,11,14-15,18,22-24H,1-2,5-10H2
InChI KeyJLVNEHKORQFVQJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenanthrenes and derivatives. These are polycyclic compounds containing a phenanthrene moiety, which is a tricyclic aromatic compound with three non-linearly fused benzene.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenanthrenes and derivatives
Sub ClassNot Available
Direct ParentPhenanthrenes and derivatives
Alternative Parents
Substituents
  • Phenanthrene
  • Tetralin
  • Coumaran
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Aralkylamine
  • Piperidine
  • Cyclic alcohol
  • Tertiary alcohol
  • 1,2-aminoalcohol
  • Secondary alcohol
  • Tertiary aliphatic amine
  • Tertiary amine
  • Ether
  • Oxacycle
  • Polyol
  • Azacycle
  • Organoheterocyclic compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Alcohol
  • Organic oxygen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility3.48 g/LALOGPS
logP1.5ALOGPS
logP0.84ChemAxon
logS-2ALOGPS
pKa (Strongest Acidic)10.3ChemAxon
pKa (Strongest Basic)9.47ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area73.16 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity92.4 m³·mol⁻¹ChemAxon
Polarizability36.72 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+180.53531661259
DarkChem[M-H]-174.76731661259
DeepCCS[M-2H]-216.55130932474
DeepCCS[M+Na]+191.82830932474
AllCCS[M+H]+183.232859911
AllCCS[M+H-H2O]+180.532859911
AllCCS[M+NH4]+185.732859911
AllCCS[M+Na]+186.432859911
AllCCS[M-H]-184.932859911
AllCCS[M+Na-2H]-184.532859911
AllCCS[M+HCOO]-184.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
6-beta-NaltrexolOC1CCC2(O)C3CC4=C5C(OC1C25CCN3CC1CC1)=C(O)C=C43955.3Standard polar33892256
6-beta-NaltrexolOC1CCC2(O)C3CC4=C5C(OC1C25CCN3CC1CC1)=C(O)C=C42959.0Standard non polar33892256
6-beta-NaltrexolOC1CCC2(O)C3CC4=C5C(OC1C25CCN3CC1CC1)=C(O)C=C42947.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
6-beta-Naltrexol,1TMS,isomer #1C[Si](C)(C)OC1CCC2(O)C3CC4=CC=C(O)C5=C4C2(CCN3CC2CC2)C1O52884.5Semi standard non polar33892256
6-beta-Naltrexol,1TMS,isomer #2C[Si](C)(C)OC12CCC(O)C3OC4=C(O)C=CC5=C4C31CCN(CC1CC1)C2C52852.1Semi standard non polar33892256
6-beta-Naltrexol,1TMS,isomer #3C[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O)CCC35O2930.2Semi standard non polar33892256
6-beta-Naltrexol,2TMS,isomer #1C[Si](C)(C)OC1CCC2(O[Si](C)(C)C)C3CC4=CC=C(O)C5=C4C2(CCN3CC2CC2)C1O52784.6Semi standard non polar33892256
6-beta-Naltrexol,2TMS,isomer #2C[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O[Si](C)(C)C)CCC35O2872.3Semi standard non polar33892256
6-beta-Naltrexol,2TMS,isomer #3C[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O)CCC35O[Si](C)(C)C2837.6Semi standard non polar33892256
6-beta-Naltrexol,3TMS,isomer #1C[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O[Si](C)(C)C)CCC35O[Si](C)(C)C2817.8Semi standard non polar33892256
6-beta-Naltrexol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1CCC2(O)C3CC4=CC=C(O)C5=C4C2(CCN3CC2CC2)C1O53096.9Semi standard non polar33892256
6-beta-Naltrexol,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC12CCC(O)C3OC4=C(O)C=CC5=C4C31CCN(CC1CC1)C2C53081.4Semi standard non polar33892256
6-beta-Naltrexol,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O)CCC35O3163.7Semi standard non polar33892256
6-beta-Naltrexol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1CCC2(O[Si](C)(C)C(C)(C)C)C3CC4=CC=C(O)C5=C4C2(CCN3CC2CC2)C1O53218.1Semi standard non polar33892256
6-beta-Naltrexol,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O[Si](C)(C)C(C)(C)C)CCC35O3317.0Semi standard non polar33892256
6-beta-Naltrexol,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O)CCC35O[Si](C)(C)C(C)(C)C3299.2Semi standard non polar33892256
6-beta-Naltrexol,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C2CC3N(CC4CC4)CCC45C2=C1OC4C(O[Si](C)(C)C(C)(C)C)CCC35O[Si](C)(C)C(C)(C)C3475.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (Non-derivatized) - 70eV, Positivesplash10-004l-9034000000-67b65afd99e88b039f182017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (3 TMS) - 70eV, Positivesplash10-00mo-9200560000-12f6230fe57f10e51e402017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS ("6-beta-Naltrexol,2TMS,#3" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-beta-Naltrexol GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 10V, Positive-QTOFsplash10-056u-2009000000-69aabc4b29b39d398ff32017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 20V, Positive-QTOFsplash10-0a4i-9007000000-173c8eb52ff812c412682017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 40V, Positive-QTOFsplash10-0a4i-9000000000-902bfc2b8f4d8bdff0a62017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 10V, Negative-QTOFsplash10-0006-0009000000-3c5fe152f2212e8736282017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 20V, Negative-QTOFsplash10-00dl-0039000000-df1d89bc5789f2f659392017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 40V, Negative-QTOFsplash10-0076-3090000000-66e43d77c62c4ce773362017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 10V, Positive-QTOFsplash10-0006-0009000000-d805c0618b333d81d5102021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 20V, Positive-QTOFsplash10-0006-0009000000-bb3083304619be806a112021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 40V, Positive-QTOFsplash10-000l-1089000000-52cd750832b00f5a67c42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 10V, Negative-QTOFsplash10-0006-0009000000-5a516184c230fa2e7a582021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 20V, Negative-QTOFsplash10-0006-0009000000-5a516184c230fa2e7a582021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-beta-Naltrexol 40V, Negative-QTOFsplash10-000x-0096000000-f74306c9c1043fa743152021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound631219
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available