Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-07-09 16:18:47 UTC
Update Date2021-09-14 14:57:39 UTC
HMDB IDHMDB0061105
Secondary Accession Numbers
  • HMDB61105
Metabolite Identification
Common Nameortho-hydroxyrosiglitazone
Descriptionortho-hydroxyrosiglitazone is a metabolite of rosiglitazone. Rosiglitazone is an antidiabetic drug in the thiazolidinedione class of drugs. It works as an insulin sensitizer, by binding to the PPAR receptors in fat cells and making the cells more responsive to insulin. It is marketed by the pharmaceutical company GlaxoSmithKline (GSK) as a stand-alone drug (Avandia) and in combination with metformin (Avandamet) or with glimepiride (Avandaryl). Annual sales peaked at approximately $2.5bn in 2006, but declined after reports of adverse effects. (Wikipedia)
Structure
Data?1563866146
SynonymsNot Available
Chemical FormulaC18H19N3O4S
Average Molecular Weight373.426
Monoisotopic Molecular Weight373.109626801
IUPAC Name4-hydroxy-5-[(4-{2-[(3-hydroxypyridin-2-yl)(methyl)amino]ethoxy}phenyl)methyl]-2,5-dihydro-1,3-thiazol-2-one
Traditional Name4-hydroxy-5-[(4-{2-[(3-hydroxypyridin-2-yl)(methyl)amino]ethoxy}phenyl)methyl]-5H-1,3-thiazol-2-one
CAS Registry NumberNot Available
SMILES
CN(CCOC1=CC=C(CC2SC(=O)N=C2O)C=C1)C1=C(O)C=CC=N1
InChI Identifier
InChI=1S/C18H19N3O4S/c1-21(16-14(22)3-2-8-19-16)9-10-25-13-6-4-12(5-7-13)11-15-17(23)20-18(24)26-15/h2-8,15,22H,9-11H2,1H3,(H,20,23,24)
InChI KeyKQXWMUFVDAFGPU-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenol ethers. These are aromatic compounds containing an ether group substituted with a benzene ring.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenol ethers
Sub ClassNot Available
Direct ParentPhenol ethers
Alternative Parents
Substituents
  • Phenoxy compound
  • Phenol ether
  • Dialkylarylamine
  • Alkyl aryl ether
  • Aminopyridine
  • Hydroxypyridine
  • Monocyclic benzene moiety
  • Pyridine
  • Imidolactam
  • Heteroaromatic compound
  • Meta-thiazoline
  • Carbonic acid derivative
  • Ether
  • Azacycle
  • Organoheterocyclic compound
  • Propargyl-type 1,3-dipolar organic compound
  • Organic 1,3-dipolar compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organopnictogen compound
  • Carbonyl group
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.13 g/LALOGPS
logP2.71ALOGPS
logP2.14ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)5.81ChemAxon
pKa (Strongest Basic)6.71ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area95.25 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity100.09 m³·mol⁻¹ChemAxon
Polarizability38.73 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+184.72431661259
DarkChem[M-H]-180.83631661259
DeepCCS[M+H]+184.92330932474
DeepCCS[M-H]-182.56530932474
DeepCCS[M-2H]-216.12230932474
DeepCCS[M+Na]+191.69530932474
AllCCS[M+H]+188.432859911
AllCCS[M+H-H2O]+185.632859911
AllCCS[M+NH4]+191.032859911
AllCCS[M+Na]+191.832859911
AllCCS[M-H]-186.232859911
AllCCS[M+Na-2H]-186.132859911
AllCCS[M+HCOO]-186.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ortho-hydroxyrosiglitazoneCN(CCOC1=CC=C(CC2SC(=O)N=C2O)C=C1)C1=C(O)C=CC=N14234.2Standard polar33892256
ortho-hydroxyrosiglitazoneCN(CCOC1=CC=C(CC2SC(=O)N=C2O)C=C1)C1=C(O)C=CC=N13342.2Standard non polar33892256
ortho-hydroxyrosiglitazoneCN(CCOC1=CC=C(CC2SC(=O)N=C2O)C=C1)C1=C(O)C=CC=N13471.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
ortho-hydroxyrosiglitazone,1TMS,isomer #1CN(CCOC1=CC=C(CC2SC(=O)N=C2O[Si](C)(C)C)C=C1)C1=NC=CC=C1O3448.5Semi standard non polar33892256
ortho-hydroxyrosiglitazone,1TMS,isomer #2CN(CCOC1=CC=C(CC2SC(=O)N=C2O)C=C1)C1=NC=CC=C1O[Si](C)(C)C3529.8Semi standard non polar33892256
ortho-hydroxyrosiglitazone,2TMS,isomer #1CN(CCOC1=CC=C(CC2SC(=O)N=C2O[Si](C)(C)C)C=C1)C1=NC=CC=C1O[Si](C)(C)C3450.4Semi standard non polar33892256
ortho-hydroxyrosiglitazone,1TBDMS,isomer #1CN(CCOC1=CC=C(CC2SC(=O)N=C2O[Si](C)(C)C(C)(C)C)C=C1)C1=NC=CC=C1O3677.9Semi standard non polar33892256
ortho-hydroxyrosiglitazone,1TBDMS,isomer #2CN(CCOC1=CC=C(CC2SC(=O)N=C2O)C=C1)C1=NC=CC=C1O[Si](C)(C)C(C)(C)C3742.0Semi standard non polar33892256
ortho-hydroxyrosiglitazone,2TBDMS,isomer #1CN(CCOC1=CC=C(CC2SC(=O)N=C2O[Si](C)(C)C(C)(C)C)C=C1)C1=NC=CC=C1O[Si](C)(C)C(C)(C)C3794.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - ortho-hydroxyrosiglitazone GC-MS (Non-derivatized) - 70eV, Positivesplash10-05g0-4932000000-7da5f4e50b59ced3de232017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - ortho-hydroxyrosiglitazone GC-MS (2 TMS) - 70eV, Positivesplash10-0ue9-4692150000-00d6fad719ebbe3a8e5d2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - ortho-hydroxyrosiglitazone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - ortho-hydroxyrosiglitazone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 10V, Positive-QTOFsplash10-00di-0219000000-9ee1246f5606ccba338c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 20V, Positive-QTOFsplash10-0udi-0925000000-f2f1a0547338d02c02772017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 40V, Positive-QTOFsplash10-0a70-1910000000-5d149c7a5cc9dd4d28622017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 10V, Negative-QTOFsplash10-00di-0229000000-0ff802c62bbd3068bda82017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 20V, Negative-QTOFsplash10-0ukc-6897000000-69fdd4c434bd3e0ba13a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 40V, Negative-QTOFsplash10-0006-9400000000-bca081c8bd3472d80bfc2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 10V, Negative-QTOFsplash10-00di-0249000000-d04dabe572ac1289c09d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 20V, Negative-QTOFsplash10-006x-6439000000-7c379ffdf2b141c6831f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 40V, Negative-QTOFsplash10-0006-9100000000-b942da07d15082e7d0352021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 10V, Positive-QTOFsplash10-00di-0509000000-b4dd5bd16cdf97320c492021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 20V, Positive-QTOFsplash10-0uk9-0529000000-2e508890ecaecaa5e4b12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ortho-hydroxyrosiglitazone 40V, Positive-QTOFsplash10-0kar-0911000000-9c742637b9b75e231d322021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Membrane (predicted from logP)
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound100995317
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available