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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-07-22 19:52:12 UTC
Update Date2019-07-23 07:15:53 UTC
HMDB IDHMDB0061168
Secondary Accession Numbers
  • HMDB61168
Metabolite Identification
Common NameN2-Monodes-methylnizatidine
DescriptionN2-Monodes-methylnizatidine, also known as N-2-MDMN, belongs to the class of organic compounds known as 2,4-disubstituted thiazoles. 2,4-disubstituted thiazoles are compounds containing a thiazole ring substituted at the positions 2 and 3. N2-Monodes-methylnizatidine is a very strong basic compound (based on its pKa). Nizatidine is a histamine H2-receptor antagonist that inhibits stomach acid production, and commonly used in the treatment of peptic ulcer disease (PUD) and gastroesophageal reflux disease (GERD). N2-Monodes-methylnizatidine is a metabolite of nizatidine. It was developed by Eli Lilly and is marketed under the brand names Tazac and Axid.
Structure
Data?1563866153
Synonyms
ValueSource
N-2-MDMNHMDB
N-2-MonodesmethylnizatidineHMDB
N-DesmethylnizatidineHMDB
Chemical FormulaC11H19N5O2S2
Average Molecular Weight317.431
Monoisotopic Molecular Weight317.098016257
IUPAC Name[(E)-1-(methylamino)-2-nitroethenyl]({2-[({2-[(methylamino)methyl]-1,3-thiazol-4-yl}methyl)sulfanyl]ethyl})amine
Traditional Name[(E)-1-(methylamino)-2-nitroethenyl]({2-[({2-[(methylamino)methyl]-1,3-thiazol-4-yl}methyl)sulfanyl]ethyl})amine
CAS Registry NumberNot Available
SMILES
CNCC1=NC(CSCCN\C(NC)=C\[N+]([O-])=O)=CS1
InChI Identifier
InChI=1S/C11H19N5O2S2/c1-12-5-11-15-9(8-20-11)7-19-4-3-14-10(13-2)6-16(17)18/h6,8,12-14H,3-5,7H2,1-2H3/b10-6+
InChI KeyQDLSRAPBCBFIQC-UXBLZVDNSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 2,4-disubstituted thiazoles. 2,4-Disubstituted thiazoles are compounds containing a thiazole ring substituted at the positions 2 and 3.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassAzoles
Sub ClassThiazoles
Direct Parent2,4-disubstituted thiazoles
Alternative Parents
Substituents
  • 2,4-disubstituted 1,3-thiazole
  • Aralkylamine
  • Heteroaromatic compound
  • C-nitro compound
  • Organic nitro compound
  • Secondary aliphatic amine
  • Organic oxoazanium
  • Secondary amine
  • Thioether
  • Sulfenyl compound
  • Allyl-type 1,3-dipolar organic compound
  • Propargyl-type 1,3-dipolar organic compound
  • Organic 1,3-dipolar compound
  • Dialkylthioether
  • Azacycle
  • Organic oxygen compound
  • Organic zwitterion
  • Amine
  • Organonitrogen compound
  • Organosulfur compound
  • Organopnictogen compound
  • Organic oxide
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.03 g/LALOGPS
logP-0.26ALOGPS
logP0.38ChemAxon
logS-4ALOGPS
pKa (Strongest Basic)7.78ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area94.8 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity91.55 m³·mol⁻¹ChemAxon
Polarizability33.91 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+164.85130932474
DeepCCS[M-H]-161.39930932474
DeepCCS[M-2H]-196.26730932474
DeepCCS[M+Na]+172.59830932474
AllCCS[M+H]+169.932859911
AllCCS[M+H-H2O]+167.232859911
AllCCS[M+NH4]+172.432859911
AllCCS[M+Na]+173.132859911
AllCCS[M-H]-167.932859911
AllCCS[M+Na-2H]-168.532859911
AllCCS[M+HCOO]-169.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
N2-Monodes-methylnizatidineCNCC1=NC(CSCCN\C(NC)=C\[N+]([O-])=O)=CS13780.9Standard polar33892256
N2-Monodes-methylnizatidineCNCC1=NC(CSCCN\C(NC)=C\[N+]([O-])=O)=CS12361.3Standard non polar33892256
N2-Monodes-methylnizatidineCNCC1=NC(CSCCN\C(NC)=C\[N+]([O-])=O)=CS12960.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
N2-Monodes-methylnizatidine,1TMS,isomer #1CN/C(=C\[N+](=O)[O-])NCCSCC1=CSC(CN(C)[Si](C)(C)C)=N13043.9Semi standard non polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #1CN/C(=C\[N+](=O)[O-])NCCSCC1=CSC(CN(C)[Si](C)(C)C)=N12708.2Standard non polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #1CN/C(=C\[N+](=O)[O-])NCCSCC1=CSC(CN(C)[Si](C)(C)C)=N14250.6Standard polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #2CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])NC)[Si](C)(C)C)=CS13010.6Semi standard non polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #2CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])NC)[Si](C)(C)C)=CS12727.4Standard non polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #2CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])NC)[Si](C)(C)C)=CS14240.6Standard polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #3CNCC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)=CS13015.8Semi standard non polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #3CNCC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)=CS12710.0Standard non polar33892256
N2-Monodes-methylnizatidine,1TMS,isomer #3CNCC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)=CS14160.9Standard polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #1CN(CC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)=CS1)[Si](C)(C)C3072.5Semi standard non polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #1CN(CC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)=CS1)[Si](C)(C)C2827.1Standard non polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #1CN(CC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)=CS1)[Si](C)(C)C3841.5Standard polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #2CN/C(=C\[N+](=O)[O-])N(CCSCC1=CSC(CN(C)[Si](C)(C)C)=N1)[Si](C)(C)C3034.5Semi standard non polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #2CN/C(=C\[N+](=O)[O-])N(CCSCC1=CSC(CN(C)[Si](C)(C)C)=N1)[Si](C)(C)C2851.5Standard non polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #2CN/C(=C\[N+](=O)[O-])N(CCSCC1=CSC(CN(C)[Si](C)(C)C)=N1)[Si](C)(C)C3897.9Standard polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #3CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)[Si](C)(C)C)=CS12940.9Semi standard non polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #3CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)[Si](C)(C)C)=CS12907.0Standard non polar33892256
N2-Monodes-methylnizatidine,2TMS,isomer #3CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)[Si](C)(C)C)=CS13718.4Standard polar33892256
N2-Monodes-methylnizatidine,3TMS,isomer #1CN(CC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)[Si](C)(C)C)=CS1)[Si](C)(C)C3004.0Semi standard non polar33892256
N2-Monodes-methylnizatidine,3TMS,isomer #1CN(CC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)[Si](C)(C)C)=CS1)[Si](C)(C)C2995.4Standard non polar33892256
N2-Monodes-methylnizatidine,3TMS,isomer #1CN(CC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C)[Si](C)(C)C)=CS1)[Si](C)(C)C3389.2Standard polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #1CN/C(=C\[N+](=O)[O-])NCCSCC1=CSC(CN(C)[Si](C)(C)C(C)(C)C)=N13253.2Semi standard non polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #1CN/C(=C\[N+](=O)[O-])NCCSCC1=CSC(CN(C)[Si](C)(C)C(C)(C)C)=N12938.3Standard non polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #1CN/C(=C\[N+](=O)[O-])NCCSCC1=CSC(CN(C)[Si](C)(C)C(C)(C)C)=N14317.8Standard polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #2CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])NC)[Si](C)(C)C(C)(C)C)=CS13195.9Semi standard non polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #2CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])NC)[Si](C)(C)C(C)(C)C)=CS12979.5Standard non polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #2CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])NC)[Si](C)(C)C(C)(C)C)=CS14195.8Standard polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #3CNCC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)=CS13194.0Semi standard non polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #3CNCC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)=CS12974.2Standard non polar33892256
N2-Monodes-methylnizatidine,1TBDMS,isomer #3CNCC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)=CS14155.3Standard polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #1CN(CC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)=CS1)[Si](C)(C)C(C)(C)C3473.1Semi standard non polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #1CN(CC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)=CS1)[Si](C)(C)C(C)(C)C3282.8Standard non polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #1CN(CC1=NC(CSCCN/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)=CS1)[Si](C)(C)C(C)(C)C3890.8Standard polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #2CN/C(=C\[N+](=O)[O-])N(CCSCC1=CSC(CN(C)[Si](C)(C)C(C)(C)C)=N1)[Si](C)(C)C(C)(C)C3455.8Semi standard non polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #2CN/C(=C\[N+](=O)[O-])N(CCSCC1=CSC(CN(C)[Si](C)(C)C(C)(C)C)=N1)[Si](C)(C)C(C)(C)C3297.6Standard non polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #2CN/C(=C\[N+](=O)[O-])N(CCSCC1=CSC(CN(C)[Si](C)(C)C(C)(C)C)=N1)[Si](C)(C)C(C)(C)C3918.4Standard polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #3CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=CS13356.7Semi standard non polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #3CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=CS13301.8Standard non polar33892256
N2-Monodes-methylnizatidine,2TBDMS,isomer #3CNCC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=CS13743.2Standard polar33892256
N2-Monodes-methylnizatidine,3TBDMS,isomer #1CN(CC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=CS1)[Si](C)(C)C(C)(C)C3615.3Semi standard non polar33892256
N2-Monodes-methylnizatidine,3TBDMS,isomer #1CN(CC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=CS1)[Si](C)(C)C(C)(C)C3549.6Standard non polar33892256
N2-Monodes-methylnizatidine,3TBDMS,isomer #1CN(CC1=NC(CSCCN(/C(=C/[N+](=O)[O-])N(C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=CS1)[Si](C)(C)C(C)(C)C3556.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - N2-Monodes-methylnizatidine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-3930000000-f3c3448c731670756b2d2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N2-Monodes-methylnizatidine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 10V, Positive-QTOFsplash10-0006-9824000000-91d8ddab6bf5745f660d2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 20V, Positive-QTOFsplash10-0006-3910000000-b261e7253be3cfc8ea302017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 40V, Positive-QTOFsplash10-0006-9400000000-1ec3a11479ce835ef4242017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 10V, Negative-QTOFsplash10-0gb9-1921000000-9fd510ae82b6ef0b4f812017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 20V, Negative-QTOFsplash10-00or-1900000000-893230bdc032bd4bf5452017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 40V, Negative-QTOFsplash10-00dl-9500000000-d007e3fcc38a813bcbe62017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 10V, Positive-QTOFsplash10-014i-0019000000-40ea7af10f101a1dc3012021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 20V, Positive-QTOFsplash10-016r-1696000000-19a9e41f259f94a0875a2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 40V, Positive-QTOFsplash10-002f-6900000000-384f6b501c1285f7729e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 10V, Negative-QTOFsplash10-014i-0239000000-32c63cabc2535def120d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 20V, Negative-QTOFsplash10-0002-4942000000-41c557308d424e2bf3ce2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N2-Monodes-methylnizatidine 40V, Negative-QTOFsplash10-0002-9800000000-fee1dfc51304cdc286162021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound13121939
PDB IDNot Available
ChEBI ID143311
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available