Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-08-01 02:19:48 UTC
Update Date2022-03-07 03:18:01 UTC
HMDB IDHMDB0094702
Secondary Accession Numbers
  • HMDB94702
Metabolite Identification
Common NameGly-Norvaline
DescriptionGly-Norvaline, also known as Glycyl-DL-norvaline or Gly-DL-norvaline, is classified as a member of the dipeptides. Dipeptides are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond. Gly-Norvaline is considered to be slightly soluble (in water) and acidic. (ChemoSummarizer)
Structure
Data?1563871218
Synonyms
ValueSource
Gly-DL-norvalineChEMBL, HMDB
Chemical FormulaC7H14N2O3
Average Molecular Weight174.2
Monoisotopic Molecular Weight174.100442319
IUPAC Name2-[(2-amino-1-hydroxyethylidene)amino]pentanoic acid
Traditional Name2-[(2-amino-1-hydroxyethylidene)amino]pentanoic acid
CAS Registry NumberNot Available
SMILES
CCCC(N=C(O)CN)C(O)=O
InChI Identifier
InChI=1S/C7H14N2O3/c1-2-3-5(7(11)12)9-6(10)4-8/h5H,2-4,8H2,1H3,(H,9,10)(H,11,12)
InChI KeyJXIQKLAZYWZTRA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentDipeptides
Alternative Parents
Substituents
  • Alpha-dipeptide
  • N-acyl-alpha-amino acid
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • Alpha-amino acid or derivatives
  • Branched fatty acid
  • Methyl-branched fatty acid
  • Fatty acyl
  • Fatty acid
  • Amino acid or derivatives
  • Amino acid
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Primary aliphatic amine
  • Primary amine
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Organopnictogen compound
  • Amine
  • Organic oxygen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-2.4ALOGPS
logP-2.4ChemAxon
logS-1.6ALOGPS
pKa (Strongest Acidic)3.63ChemAxon
pKa (Strongest Basic)9.33ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area95.91 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity42.95 m³·mol⁻¹ChemAxon
Polarizability17.92 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+141.35131661259
DarkChem[M-H]-136.05431661259
DeepCCS[M+H]+135.04330932474
DeepCCS[M-H]-131.21930932474
DeepCCS[M-2H]-168.55630932474
DeepCCS[M+Na]+143.91730932474
AllCCS[M+H]+140.732859911
AllCCS[M+H-H2O]+136.932859911
AllCCS[M+NH4]+144.332859911
AllCCS[M+Na]+145.332859911
AllCCS[M-H]-136.532859911
AllCCS[M+Na-2H]-138.132859911
AllCCS[M+HCOO]-139.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Gly-NorvalineCCCC(N=C(O)CN)C(O)=O2385.4Standard polar33892256
Gly-NorvalineCCCC(N=C(O)CN)C(O)=O1618.2Standard non polar33892256
Gly-NorvalineCCCC(N=C(O)CN)C(O)=O1697.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Gly-Norvaline,1TMS,isomer #1CCCC(N=C(CN)O[Si](C)(C)C)C(=O)O1644.0Semi standard non polar33892256
Gly-Norvaline,1TMS,isomer #2CCCC(N=C(O)CN)C(=O)O[Si](C)(C)C1627.4Semi standard non polar33892256
Gly-Norvaline,1TMS,isomer #3CCCC(N=C(O)CN[Si](C)(C)C)C(=O)O1737.7Semi standard non polar33892256
Gly-Norvaline,2TMS,isomer #1CCCC(N=C(CN)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1679.6Semi standard non polar33892256
Gly-Norvaline,2TMS,isomer #2CCCC(N=C(CN[Si](C)(C)C)O[Si](C)(C)C)C(=O)O1739.8Semi standard non polar33892256
Gly-Norvaline,2TMS,isomer #3CCCC(N=C(O)CN[Si](C)(C)C)C(=O)O[Si](C)(C)C1743.2Semi standard non polar33892256
Gly-Norvaline,2TMS,isomer #4CCCC(N=C(O)CN([Si](C)(C)C)[Si](C)(C)C)C(=O)O1885.6Semi standard non polar33892256
Gly-Norvaline,3TMS,isomer #1CCCC(N=C(CN[Si](C)(C)C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1757.2Semi standard non polar33892256
Gly-Norvaline,3TMS,isomer #1CCCC(N=C(CN[Si](C)(C)C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1744.3Standard non polar33892256
Gly-Norvaline,3TMS,isomer #1CCCC(N=C(CN[Si](C)(C)C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2018.9Standard polar33892256
Gly-Norvaline,3TMS,isomer #2CCCC(N=C(CN([Si](C)(C)C)[Si](C)(C)C)O[Si](C)(C)C)C(=O)O1930.7Semi standard non polar33892256
Gly-Norvaline,3TMS,isomer #2CCCC(N=C(CN([Si](C)(C)C)[Si](C)(C)C)O[Si](C)(C)C)C(=O)O1832.4Standard non polar33892256
Gly-Norvaline,3TMS,isomer #2CCCC(N=C(CN([Si](C)(C)C)[Si](C)(C)C)O[Si](C)(C)C)C(=O)O2253.1Standard polar33892256
Gly-Norvaline,3TMS,isomer #3CCCC(N=C(O)CN([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C1903.8Semi standard non polar33892256
Gly-Norvaline,3TMS,isomer #3CCCC(N=C(O)CN([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C1828.8Standard non polar33892256
Gly-Norvaline,3TMS,isomer #3CCCC(N=C(O)CN([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2191.6Standard polar33892256
Gly-Norvaline,4TMS,isomer #1CCCC(N=C(CN([Si](C)(C)C)[Si](C)(C)C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1963.8Semi standard non polar33892256
Gly-Norvaline,4TMS,isomer #1CCCC(N=C(CN([Si](C)(C)C)[Si](C)(C)C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1859.3Standard non polar33892256
Gly-Norvaline,4TMS,isomer #1CCCC(N=C(CN([Si](C)(C)C)[Si](C)(C)C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1910.4Standard polar33892256
Gly-Norvaline,1TBDMS,isomer #1CCCC(N=C(CN)O[Si](C)(C)C(C)(C)C)C(=O)O1883.0Semi standard non polar33892256
Gly-Norvaline,1TBDMS,isomer #2CCCC(N=C(O)CN)C(=O)O[Si](C)(C)C(C)(C)C1859.1Semi standard non polar33892256
Gly-Norvaline,1TBDMS,isomer #3CCCC(N=C(O)CN[Si](C)(C)C(C)(C)C)C(=O)O1954.9Semi standard non polar33892256
Gly-Norvaline,2TBDMS,isomer #1CCCC(N=C(CN)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2091.0Semi standard non polar33892256
Gly-Norvaline,2TBDMS,isomer #2CCCC(N=C(CN[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O2163.6Semi standard non polar33892256
Gly-Norvaline,2TBDMS,isomer #3CCCC(N=C(O)CN[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2173.5Semi standard non polar33892256
Gly-Norvaline,2TBDMS,isomer #4CCCC(N=C(O)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O2256.4Semi standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #1CCCC(N=C(CN[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2338.6Semi standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #1CCCC(N=C(CN[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2270.8Standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #1CCCC(N=C(CN[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2351.2Standard polar33892256
Gly-Norvaline,3TBDMS,isomer #2CCCC(N=C(CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O2545.8Semi standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #2CCCC(N=C(CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O2341.1Standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #2CCCC(N=C(CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O2491.7Standard polar33892256
Gly-Norvaline,3TBDMS,isomer #3CCCC(N=C(O)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2506.1Semi standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #3CCCC(N=C(O)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2412.9Standard non polar33892256
Gly-Norvaline,3TBDMS,isomer #3CCCC(N=C(O)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2476.7Standard polar33892256
Gly-Norvaline,4TBDMS,isomer #1CCCC(N=C(CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2764.0Semi standard non polar33892256
Gly-Norvaline,4TBDMS,isomer #1CCCC(N=C(CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2562.1Standard non polar33892256
Gly-Norvaline,4TBDMS,isomer #1CCCC(N=C(CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2362.3Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Gly-Norvaline GC-MS (Non-derivatized) - 70eV, Positivesplash10-001i-9100000000-5edf86298d8aafd6ad042017-09-14Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gly-Norvaline GC-MS (2 TMS) - 70eV, Positivesplash10-001i-9120000000-c81b51ee7cfc9f59a7c22017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gly-Norvaline GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gly-Norvaline GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 10V, Negative-QTOFsplash10-00di-0900000000-2157e387f4c3da655d962017-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 20V, Negative-QTOFsplash10-05i0-4900000000-52949c4757d5e8e0bf092017-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 40V, Negative-QTOFsplash10-00dl-9100000000-24b5e593eb37be4b04cf2017-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 10V, Positive-QTOFsplash10-004i-3900000000-f4dcd707686eb19a41d42017-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 20V, Positive-QTOFsplash10-0089-9400000000-cbe5f93799e1c2a848aa2017-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 40V, Positive-QTOFsplash10-00ec-9000000000-ca88d925a8ae23ae84422017-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 10V, Negative-QTOFsplash10-03xr-0900000000-390a99f7febb06c357942021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 20V, Negative-QTOFsplash10-0a4i-9500000000-b3624978c2069938e0002021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 40V, Negative-QTOFsplash10-0006-9100000000-4514d0777a0c88c66df02021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 10V, Positive-QTOFsplash10-00or-1900000000-cbf3c67d0d9e8b6c7e622021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 20V, Positive-QTOFsplash10-00di-9100000000-dcaa45d7b1d75af94fb92021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gly-Norvaline 40V, Positive-QTOFsplash10-0ab9-9000000000-4bf4529bd29c4d05e7902021-09-24Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound86841
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available