Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:15:33 UTC |
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Update Date | 2022-11-30 19:25:59 UTC |
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HMDB ID | HMDB0114979 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(18:3(6Z,9Z,12Z)/18:1(11Z)) |
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Description | PA(18:3(6Z,9Z,12Z)/18:1(11Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(18:3(6Z,9Z,12Z)/18:1(11Z)), in particular, consists of one chain of gamma-linolenic acid at the C-1 position and one chain of cis-vaccenic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCCCCC\C=C/CCCCCC InChI=1S/C39H69O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38(40)45-35-37(36-46-48(42,43)44)47-39(41)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h11,13-14,16-17,19,23,25,37H,3-10,12,15,18,20-22,24,26-36H2,1-2H3,(H2,42,43,44)/b13-11-,16-14-,19-17-,25-23-/t37-/m1/s1 |
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Synonyms | Value | Source |
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1-gamma-linolenoyl-2-cis-vaccenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-gamma-linolenoyl-2-cis-vaccenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(18:3/18:1) | SMPDB, HMDB | PA(18:3n6/18:1n7) | SMPDB, HMDB | PA(18:3w6/18:1w7) | SMPDB, HMDB | PA(36:4) | SMPDB, HMDB | Phosphatidic acid(18:3(6Z,9Z,12Z)/18:1(11Z)) | SMPDB, HMDB | Phosphatidic acid(18:3/18:1) | SMPDB, HMDB | Phosphatidic acid(18:3n6/18:1n7) | SMPDB, HMDB | Phosphatidic acid(18:3w6/18:1w7) | SMPDB, HMDB | Phosphatidic acid(36:4) | SMPDB, HMDB | Phosphatidate(18:3(6Z,9Z,12Z)/18:1(11Z)) | SMPDB, HMDB | Phosphatidate(18:3/18:1) | SMPDB, HMDB | Phosphatidate(18:3n6/18:1n7) | SMPDB, HMDB | Phosphatidate(18:3w6/18:1w7) | SMPDB, HMDB | Phosphatidate(36:4) | SMPDB, HMDB | PA(18:3(6Z,9Z,12Z)/18:1(11Z)) | SMPDB | [(2R)-2-[(11Z)-Octadec-11-enoyloxy]-3-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxy]phosphonate | Generator, HMDB |
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Chemical Formula | C39H69O8P |
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Average Molecular Weight | 696.947 |
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Monoisotopic Molecular Weight | 696.47300618 |
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IUPAC Name | [(2R)-2-[(11Z)-octadec-11-enoyloxy]-3-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-2-[(11Z)-octadec-11-enoyloxy]-3-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCCCCC\C=C/CCCCCC |
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InChI Identifier | InChI=1S/C39H69O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38(40)45-35-37(36-46-48(42,43)44)47-39(41)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h11,13-14,16-17,19,23,25,37H,3-10,12,15,18,20-22,24,26-36H2,1-2H3,(H2,42,43,44)/b13-11-,16-14-,19-17-,25-23-/t37-/m1/s1 |
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InChI Key | AHLPLNNRMHPXKH-YYWRJTHLSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0024523)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0024524)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/22:2(13Z,16Z)) (PathBank: SMP0024525)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0024526)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0024527)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0024528)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0024529)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0024530)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0024531)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024532)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024533)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/20:2(11Z,14Z)) (PathBank: SMP0033311)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/18:1(11Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0033312)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(18:3(6Z,9Z,12Z)/18:1(11Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4934.7 | Semi standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4356.3 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5479.0 | Standard polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4905.0 | Semi standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4319.2 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4742.6 | Standard polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5158.8 | Semi standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4460.8 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/18:1(11Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5468.6 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 10V, Positive-QTOF | splash10-014j-1182927000-814e1d78f39579764020 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 20V, Positive-QTOF | splash10-014i-3293432000-2ded8280366ca8bc625b | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 40V, Positive-QTOF | splash10-014r-1196122000-766e211f17943d69f05c | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 10V, Negative-QTOF | splash10-056s-3090302000-051825bbd40e65c565a7 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 20V, Negative-QTOF | splash10-004i-9050000000-02a35ad4f63201e369de | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 40V, Negative-QTOF | splash10-004i-9000000000-cb24ba35c99238f1d15f | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 10V, Positive-QTOF | splash10-004j-0000009000-8b88b98eab7e161d5872 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 20V, Positive-QTOF | splash10-0002-0000059000-63d74b98d40aee73f8c4 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 40V, Positive-QTOF | splash10-014j-0000962000-25ddb10fb5f35085ae5b | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 10V, Negative-QTOF | splash10-0002-0000009000-1893c50f1f6cce1e67a0 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 20V, Negative-QTOF | splash10-040t-0060904000-84bf518e2ec2d75538f0 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 40V, Negative-QTOF | splash10-0059-0090300000-b931ef55efd53106c70a | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 10V, Positive-QTOF | splash10-014i-0000000900-880d5930a7c08196e5c4 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 20V, Positive-QTOF | splash10-01i0-0000009900-5d255d71254b516f42e9 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/18:1(11Z)) 40V, Positive-QTOF | splash10-0avu-0000901300-c8bfc9c9710b7a29bf46 | 2021-09-23 | Wishart Lab | View Spectrum |
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