Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:36:23 UTC |
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Update Date | 2022-11-30 19:26:03 UTC |
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HMDB ID | HMDB0115100 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:1(11Z)/18:3(6Z,9Z,12Z)) |
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Description | PA(20:1(11Z)/18:3(6Z,9Z,12Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:1(11Z)/18:3(6Z,9Z,12Z)), in particular, consists of one chain of eicosenoic acid at the C-1 position and one chain of gamma-linolenic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCCCCCCCC\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC InChI=1S/C41H73O8P/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(42)47-37-39(38-48-50(44,45)46)49-41(43)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2/h12,14,17-19,21,26,28,39H,3-11,13,15-16,20,22-25,27,29-38H2,1-2H3,(H2,44,45,46)/b14-12-,19-17-,21-18-,28-26-/t39-/m1/s1 |
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Synonyms | Value | Source |
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1-eicosenoyl-2-gamma-linolenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-eicosenoyl-2-gamma-linolenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:1/18:3) | SMPDB, HMDB | PA(20:1n9/18:3n6) | SMPDB, HMDB | PA(20:1w9/18:3w6) | SMPDB, HMDB | PA(38:4) | SMPDB, HMDB | Phosphatidic acid(20:1(11Z)/18:3(6Z,9Z,12Z)) | SMPDB, HMDB | Phosphatidic acid(20:1/18:3) | SMPDB, HMDB | Phosphatidic acid(20:1n9/18:3n6) | SMPDB, HMDB | Phosphatidic acid(20:1w9/18:3w6) | SMPDB, HMDB | Phosphatidic acid(38:4) | SMPDB, HMDB | Phosphatidate(20:1(11Z)/18:3(6Z,9Z,12Z)) | SMPDB, HMDB | Phosphatidate(20:1/18:3) | SMPDB, HMDB | Phosphatidate(20:1n9/18:3n6) | SMPDB, HMDB | Phosphatidate(20:1w9/18:3w6) | SMPDB, HMDB | Phosphatidate(38:4) | SMPDB, HMDB | PA(20:1(11Z)/18:3(6Z,9Z,12Z)) | SMPDB |
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Chemical Formula | C41H73O8P |
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Average Molecular Weight | 725.001 |
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Monoisotopic Molecular Weight | 724.504306309 |
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IUPAC Name | [(2R)-3-[(11Z)-icos-11-enoyloxy]-2-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(11Z)-icos-11-enoyloxy]-2-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCCCCCCCC\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC |
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InChI Identifier | InChI=1S/C41H73O8P/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(42)47-37-39(38-48-50(44,45)46)49-41(43)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2/h12,14,17-19,21,26,28,39H,3-11,13,15-16,20,22-25,27,29-38H2,1-2H3,(H2,44,45,46)/b14-12-,19-17-,21-18-,28-26-/t39-/m1/s1 |
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InChI Key | CTZIFPVLQHRRDD-AFIKDLIBSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:1(11Z)) (PathBank: SMP0022819)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:3(5Z,8Z,11Z)) (PathBank: SMP0022820)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/22:1(13Z)) (PathBank: SMP0022821)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/24:1(15Z)) (PathBank: SMP0022822)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/18:2(9Z,12Z)) (PathBank: SMP0022823)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0022824)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0022825)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/22:2(13Z,16Z)) (PathBank: SMP0022826)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0022827)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0022828)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0022829)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0022830)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0022831)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0022832)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0022833)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0022834)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:2(11Z,14Z)) (PathBank: SMP0034436)
- De Novo Triacylglycerol Biosynthesis TG(20:1(11Z)/18:3(6Z,9Z,12Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0034437)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:1(11Z)/18:3(6Z,9Z,12Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5133.3 | Semi standard non polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 4521.0 | Standard non polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5649.1 | Standard polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 5102.8 | Semi standard non polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4482.9 | Standard non polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4912.6 | Standard polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5360.3 | Semi standard non polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 4619.2 | Standard non polar | 33892256 | PA(20:1(11Z)/18:3(6Z,9Z,12Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5637.0 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 10V, Positive-QTOF | splash10-01ta-1192602400-98ddd8a6e52d71605acc | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 20V, Positive-QTOF | splash10-01ow-2192212000-c9316bdf53f8384f6b18 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 40V, Positive-QTOF | splash10-0gbc-1195003000-f1ba0cf9e3ea0d374cc7 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 10V, Negative-QTOF | splash10-05dl-5095400300-cb28460f6054781b5ca5 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 20V, Negative-QTOF | splash10-004i-9032000000-fddbfe56ff22579a3d88 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 40V, Negative-QTOF | splash10-004i-9000000000-7cd22a1677942c7084e1 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 10V, Positive-QTOF | splash10-0a6r-0000000900-f25618a4673f1c76e672 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 20V, Positive-QTOF | splash10-004i-0000005900-4871ac345f15ca0d32cd | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 40V, Positive-QTOF | splash10-00os-0000906200-0ac43e03f46c19c0f329 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 10V, Negative-QTOF | splash10-00di-0000000900-503da6078c6f482f0a70 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 20V, Negative-QTOF | splash10-076t-0033900400-945b67b7b2d0ceb36315 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 40V, Negative-QTOF | splash10-0a6r-1169600100-79beed4b6a952846f83f | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 10V, Positive-QTOF | splash10-0002-0000000900-c7217cc8b4fecc83cb81 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 20V, Positive-QTOF | splash10-0002-0000009900-9aeab714e87e1529316e | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:1(11Z)/18:3(6Z,9Z,12Z)) 40V, Positive-QTOF | splash10-00kk-0000902300-b9de7d577efbac1f0636 | 2021-09-24 | Wishart Lab | View Spectrum |
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