Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:41:46 UTC |
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Update Date | 2022-11-30 19:26:03 UTC |
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HMDB ID | HMDB0115131 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:3(5Z,8Z,11Z)/20:1(11Z)) |
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Description | PA(20:3(5Z,8Z,11Z)/20:1(11Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:3(5Z,8Z,11Z)/20:1(11Z)), in particular, consists of one chain of mead acid at the C-1 position and one chain of eicosenoic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCCCCC\C=C/CCCCCCCC InChI=1S/C43H77O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-42(44)49-39-41(40-50-52(46,47)48)51-43(45)38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h17-20,23,25,29,31,41H,3-16,21-22,24,26-28,30,32-40H2,1-2H3,(H2,46,47,48)/b19-17-,20-18-,25-23-,31-29-/t41-/m1/s1 |
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Synonyms | Value | Source |
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1-meadoyl-2-eicosenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-meadoyl-2-eicosenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:3/20:1) | SMPDB, HMDB | PA(20:3n9/20:1n9) | SMPDB, HMDB | PA(20:3w9/20:1w9) | SMPDB, HMDB | PA(40:4) | SMPDB, HMDB | Phosphatidic acid(20:3(5Z,8Z,11Z)/20:1(11Z)) | SMPDB, HMDB | Phosphatidic acid(20:3/20:1) | SMPDB, HMDB | Phosphatidic acid(20:3n9/20:1n9) | SMPDB, HMDB | Phosphatidic acid(20:3w9/20:1w9) | SMPDB, HMDB | Phosphatidic acid(40:4) | SMPDB, HMDB | Phosphatidate(20:3(5Z,8Z,11Z)/20:1(11Z)) | SMPDB, HMDB | Phosphatidate(20:3/20:1) | SMPDB, HMDB | Phosphatidate(20:3n9/20:1n9) | SMPDB, HMDB | Phosphatidate(20:3w9/20:1w9) | SMPDB, HMDB | Phosphatidate(40:4) | SMPDB, HMDB | PA(20:3(5Z,8Z,11Z)/20:1(11Z)) | SMPDB | [(2R)-2-[(11Z)-Icos-11-enoyloxy]-3-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]propoxy]phosphonate | Generator, HMDB |
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Chemical Formula | C43H77O8P |
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Average Molecular Weight | 753.055 |
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Monoisotopic Molecular Weight | 752.535606437 |
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IUPAC Name | [(2R)-2-[(11Z)-icos-11-enoyloxy]-3-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-2-[(11Z)-icos-11-enoyloxy]-3-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCCCCC\C=C/CCCCCCCC |
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InChI Identifier | InChI=1S/C43H77O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-42(44)49-39-41(40-50-52(46,47)48)51-43(45)38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h17-20,23,25,29,31,41H,3-16,21-22,24,26-28,30,32-40H2,1-2H3,(H2,46,47,48)/b19-17-,20-18-,25-23-,31-29-/t41-/m1/s1 |
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InChI Key | YJGBNHVYWNPWLA-OAWHKRQZSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/20:3(5Z,8Z,11Z)) (PathBank: SMP0023159)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/22:1(13Z)) (PathBank: SMP0023160)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/24:1(15Z)) (PathBank: SMP0023161)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/18:2(9Z,12Z)) (PathBank: SMP0023162)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0023163)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0023164)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/22:2(13Z,16Z)) (PathBank: SMP0023165)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0023166)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0023167)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0023168)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0023169)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0023170)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0023171)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0023172)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0023173)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/20:2(11Z,14Z)) (PathBank: SMP0034882)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:1(11Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0034883)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:3(5Z,8Z,11Z)/20:1(11Z)),1TMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 5342.1 | Semi standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),1TMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 4686.1 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),1TMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 5817.2 | Standard polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),2TMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 5309.1 | Semi standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),2TMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 4649.1 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),2TMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 5082.8 | Standard polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),1TBDMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 5571.8 | Semi standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),1TBDMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 4779.6 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:1(11Z)),1TBDMS,isomer #1 | CCCCCCCC/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCCCC | 5803.3 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 10V, Positive-QTOF | splash10-0f7d-1164903600-f825c5aa0aa9615c0a70 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 20V, Positive-QTOF | splash10-000b-3294413100-00910a496b3b11ae79d2 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 40V, Positive-QTOF | splash10-01ot-1198215000-02395be0a0867100805a | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 10V, Negative-QTOF | splash10-0a4i-5059500300-c4bdf7a079171bc8008a | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 20V, Negative-QTOF | splash10-004i-9023000000-3095656d9cc1ee45dffc | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 40V, Negative-QTOF | splash10-004i-9000000000-fffdba9795feda95aa39 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 10V, Negative-QTOF | splash10-0udi-0000000900-e8a2290e8255e37d1996 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 20V, Negative-QTOF | splash10-0pbc-0006900400-028f70c2a55afaf26954 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 40V, Negative-QTOF | splash10-0a4i-0009300000-425472d057a0e6b9e86a | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 10V, Positive-QTOF | splash10-004i-0000000900-02cf947cba8282294585 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 20V, Positive-QTOF | splash10-004i-0000009900-b6a834ad91359eb11884 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 40V, Positive-QTOF | splash10-016r-0000902300-4ea57424c938d3130fd4 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 10V, Positive-QTOF | splash10-0f79-0000000900-115cf847b0b45deff91d | 2021-09-25 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 20V, Positive-QTOF | splash10-0zfr-0000005900-3ecaea0650a91ae05061 | 2021-09-25 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:1(11Z)) 40V, Positive-QTOF | splash10-0a4m-0000906200-21bbd6648297653ffe93 | 2021-09-25 | Wishart Lab | View Spectrum |
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