Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:45:01 UTC |
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Update Date | 2022-11-30 19:26:04 UTC |
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HMDB ID | HMDB0115150 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) |
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Description | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)), in particular, consists of one chain of arachidonic acid at the C-1 position and one chain of cis-vaccenic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCCCCC\C=C/CCCCCC InChI=1S/C41H71O8P/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(42)47-37-39(38-48-50(44,45)46)49-41(43)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2/h11,13-14,16-17,19,22-23,27,29,39H,3-10,12,15,18,20-21,24-26,28,30-38H2,1-2H3,(H2,44,45,46)/b13-11-,16-14-,19-17-,23-22-,29-27-/t39-/m1/s1 |
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Synonyms | Value | Source |
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1-arachidonoyl-2-cis-vaccenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-arachidonoyl-2-cis-vaccenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:4/18:1) | SMPDB, HMDB | PA(20:4n6/18:1n7) | SMPDB, HMDB | PA(20:4w6/18:1w7) | SMPDB, HMDB | PA(38:5) | SMPDB, HMDB | Phosphatidic acid(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) | SMPDB, HMDB | Phosphatidic acid(20:4/18:1) | SMPDB, HMDB | Phosphatidic acid(20:4n6/18:1n7) | SMPDB, HMDB | Phosphatidic acid(20:4w6/18:1w7) | SMPDB, HMDB | Phosphatidic acid(38:5) | SMPDB, HMDB | Phosphatidate(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) | SMPDB, HMDB | Phosphatidate(20:4/18:1) | SMPDB, HMDB | Phosphatidate(20:4n6/18:1n7) | SMPDB, HMDB | Phosphatidate(20:4w6/18:1w7) | SMPDB, HMDB | Phosphatidate(38:5) | SMPDB, HMDB | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) | SMPDB | [(2R)-3-[(5Z,8Z,11Z,14Z)-Icosa-5,8,11,14-tetraenoyloxy]-2-[(11Z)-octadec-11-enoyloxy]propoxy]phosphonate | Generator, HMDB |
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Chemical Formula | C41H71O8P |
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Average Molecular Weight | 722.985 |
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Monoisotopic Molecular Weight | 722.488656244 |
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IUPAC Name | [(2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-2-[(11Z)-octadec-11-enoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-2-[(11Z)-octadec-11-enoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCCCCC\C=C/CCCCCC |
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InChI Identifier | InChI=1S/C41H71O8P/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(42)47-37-39(38-48-50(44,45)46)49-41(43)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2/h11,13-14,16-17,19,22-23,27,29,39H,3-10,12,15,18,20-21,24-26,28,30-38H2,1-2H3,(H2,44,45,46)/b13-11-,16-14-,19-17-,23-22-,29-27-/t39-/m1/s1 |
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InChI Key | IQJBXZNFVWBOCJ-QUACFGHDSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0016135)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:2(13Z,16Z)) (PathBank: SMP0024807)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0024808)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0024809)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0024810)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0024811)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0024812)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0024813)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024814)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024815)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) (PathBank: SMP0029636)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/18:1(9Z)) (PathBank: SMP0029637)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/18:2(9Z,12Z)) (PathBank: SMP0029638)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0029639)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0029640)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0029641)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0029642)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/18:1(11Z)) (PathBank: SMP0029643)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/18:1(9Z)) (PathBank: SMP0029644)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0029645)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0029646)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0029647)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/18:1(11Z)) (PathBank: SMP0029648)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/18:1(9Z)) (PathBank: SMP0029649)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0029650)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0029651)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0029652)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:1(11Z)) (PathBank: SMP0029653)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:1(9Z)) (PathBank: SMP0029654)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0029655)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0029656)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5130.3 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4528.6 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5511.0 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5112.4 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4493.3 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4801.4 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5351.7 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 4635.7 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCC/C=C\CCCCCC | 5504.4 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 10V, Positive-QTOF | splash10-06dr-1091502400-7f26645bca5592d7f92d | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 20V, Positive-QTOF | splash10-00kk-1192202000-1549a1dff451da3b0713 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 40V, Positive-QTOF | splash10-01vt-1095013000-8769f6e33c633b145408 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 10V, Negative-QTOF | splash10-0f9i-5095400300-668d9a84a35bd8cf0b2a | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 20V, Negative-QTOF | splash10-004i-9032000000-38ffc50076af4505e440 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 40V, Negative-QTOF | splash10-004i-9000000000-6f75e84e240ec6bd3787 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 10V, Positive-QTOF | splash10-0002-0000000900-3c6297c8e75d148e84fe | 2021-09-21 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 20V, Positive-QTOF | splash10-0002-0000009900-bf69caf620d90cd37f0a | 2021-09-21 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 40V, Positive-QTOF | splash10-01ow-0000902300-a9d6462aa5664b7e5bd7 | 2021-09-21 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 10V, Positive-QTOF | splash10-0ab9-0000000900-7954a08116ed6bddb705 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 20V, Positive-QTOF | splash10-00fr-0000005900-8efe52195da8bbe88870 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 40V, Positive-QTOF | splash10-00ou-0000906200-735c234770740eea2653 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 10V, Negative-QTOF | splash10-00di-0000000900-8021e9daadeb1989f632 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 20V, Negative-QTOF | splash10-0fz0-0033900400-2dfa5fa8d3355dfcdd27 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)) 40V, Negative-QTOF | splash10-0ue9-1169600100-245662358b1950ca0f41 | 2021-09-22 | Wishart Lab | View Spectrum |
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