Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 04:46:54 UTC |
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Update Date | 2022-11-30 19:26:12 UTC |
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HMDB ID | HMDB0115464 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(24:1(15Z)/18:3(6Z,9Z,12Z)) |
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Description | PA(24:1(15Z)/18:3(6Z,9Z,12Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(24:1(15Z)/18:3(6Z,9Z,12Z)), in particular, consists of one chain of nervonic acid at the C-1 position and one chain of gamma-linolenic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCCCCCCCCCCCC\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC InChI=1S/C45H81O8P/c1-3-5-7-9-11-13-15-17-19-20-21-22-23-24-26-27-29-31-33-35-37-39-44(46)51-41-43(42-52-54(48,49)50)53-45(47)40-38-36-34-32-30-28-25-18-16-14-12-10-8-6-4-2/h12,14,17-19,25,30,32,43H,3-11,13,15-16,20-24,26-29,31,33-42H2,1-2H3,(H2,48,49,50)/b14-12-,19-17-,25-18-,32-30-/t43-/m1/s1 |
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Synonyms | Value | Source |
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1-nervonoyl-2-gamma-linolenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-nervonoyl-2-gamma-linolenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(24:1/18:3) | SMPDB, HMDB | PA(24:1n9/18:3n6) | SMPDB, HMDB | PA(24:1w9/18:3w6) | SMPDB, HMDB | PA(42:4) | SMPDB, HMDB | Phosphatidic acid(24:1(15Z)/18:3(6Z,9Z,12Z)) | SMPDB, HMDB | Phosphatidic acid(24:1/18:3) | SMPDB, HMDB | Phosphatidic acid(24:1n9/18:3n6) | SMPDB, HMDB | Phosphatidic acid(24:1w9/18:3w6) | SMPDB, HMDB | Phosphatidic acid(42:4) | SMPDB, HMDB | Phosphatidate(24:1(15Z)/18:3(6Z,9Z,12Z)) | SMPDB, HMDB | Phosphatidate(24:1/18:3) | SMPDB, HMDB | Phosphatidate(24:1n9/18:3n6) | SMPDB, HMDB | Phosphatidate(24:1w9/18:3w6) | SMPDB, HMDB | Phosphatidate(42:4) | SMPDB, HMDB | PA(24:1(15Z)/18:3(6Z,9Z,12Z)) | SMPDB | [(2R)-2-[(6Z,9Z,12Z)-Octadeca-6,9,12-trienoyloxy]-3-[(15Z)-tetracos-15-enoyloxy]propoxy]phosphonate | Generator, HMDB |
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Chemical Formula | C45H81O8P |
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Average Molecular Weight | 781.109 |
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Monoisotopic Molecular Weight | 780.566906566 |
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IUPAC Name | [(2R)-2-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]-3-[(15Z)-tetracos-15-enoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-2-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]-3-[(15Z)-tetracos-15-enoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCCCCCCCCCCCC\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC |
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InChI Identifier | InChI=1S/C45H81O8P/c1-3-5-7-9-11-13-15-17-19-20-21-22-23-24-26-27-29-31-33-35-37-39-44(46)51-41-43(42-52-54(48,49)50)53-45(47)40-38-36-34-32-30-28-25-18-16-14-12-10-8-6-4-2/h12,14,17-19,25,30,32,43H,3-11,13,15-16,20-24,26-29,31,33-42H2,1-2H3,(H2,48,49,50)/b14-12-,19-17-,25-18-,32-30-/t43-/m1/s1 |
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InChI Key | RWCYNMPYUNPCLG-NUPWCGCMSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/24:1(15Z)) (PathBank: SMP0023985)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/18:2(9Z,12Z)) (PathBank: SMP0023986)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0023987)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0023988)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/22:2(13Z,16Z)) (PathBank: SMP0023989)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0023990)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0023991)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0023992)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0023993)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0023994)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0023995)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0023996)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0023997)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/20:2(11Z,14Z)) (PathBank: SMP0037085)
- De Novo Triacylglycerol Biosynthesis TG(24:1(15Z)/18:3(6Z,9Z,12Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0037086)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(24:1(15Z)/18:3(6Z,9Z,12Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5557.6 | Semi standard non polar | 33892256 | PA(24:1(15Z)/18:3(6Z,9Z,12Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 4847.4 | Standard non polar | 33892256 | PA(24:1(15Z)/18:3(6Z,9Z,12Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5988.0 | Standard polar | 33892256 | PA(24:1(15Z)/18:3(6Z,9Z,12Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5785.7 | Semi standard non polar | 33892256 | PA(24:1(15Z)/18:3(6Z,9Z,12Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 4935.5 | Standard non polar | 33892256 | PA(24:1(15Z)/18:3(6Z,9Z,12Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5971.1 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 10V, Positive-QTOF | splash10-03ea-2188563900-79179d5a3b65feae358c | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 20V, Positive-QTOF | splash10-01ot-3279534300-cb28b7204d1b978c4b44 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 40V, Positive-QTOF | splash10-0c01-2179805200-619a9138562041303ccd | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 10V, Negative-QTOF | splash10-00os-4039030300-b7d0c6dd66673ad4517a | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 20V, Negative-QTOF | splash10-004j-9015000000-b0f591bfae77d7cbc776 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 40V, Negative-QTOF | splash10-004i-9000000000-1bc64e2e93fcc95e3dfe | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 10V, Positive-QTOF | splash10-03e9-0000000900-5758e0ff0c13618a7b94 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 20V, Positive-QTOF | splash10-001i-0000005900-9de5ca1c3a2ad9c8465f | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 40V, Positive-QTOF | splash10-0fsi-0000669300-fbbdb8a5628624d48ed3 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 10V, Negative-QTOF | splash10-004i-0000000900-d82318e0eebb3edd5000 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 20V, Negative-QTOF | splash10-0fb9-1155690700-ef5d0e8ff6ffec963fea | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 40V, Negative-QTOF | splash10-016r-1169330100-c914c5b8b7562741a7cc | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 10V, Positive-QTOF | splash10-0udi-0000000090-faa9cdcdef13f4e1a75e | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 20V, Positive-QTOF | splash10-14i0-0000000990-d2c675cb4645a7eae1fa | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(24:1(15Z)/18:3(6Z,9Z,12Z)) 40V, Positive-QTOF | splash10-0pdu-0000990460-c25faa2c720b749f60de | 2021-09-23 | Wishart Lab | View Spectrum |
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