Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 04:51:20 UTC |
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Update Date | 2022-11-30 19:26:13 UTC |
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HMDB ID | HMDB0115494 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) |
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Description | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)), in particular, consists of one chain of mead acid at the C-1 position and one chain of dihomo-gamma-linolenic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC InChI=1S/C43H73O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-42(44)49-39-41(40-50-52(46,47)48)51-43(45)38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h12,14,17-20,23-26,29,31,41H,3-11,13,15-16,21-22,27-28,30,32-40H2,1-2H3,(H2,46,47,48)/b14-12-,19-17-,20-18-,25-23-,26-24-,31-29-/t41-/m1/s1 |
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Synonyms | Value | Source |
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1-meadoyl-2-dihomo-gamma-linolenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-meadoyl-2-dihomo-gamma-linolenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:3/20:3) | SMPDB, HMDB | PA(20:3n9/20:3n6) | SMPDB, HMDB | PA(20:3w9/20:3w6) | SMPDB, HMDB | PA(40:6) | SMPDB, HMDB | Phosphatidic acid(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) | SMPDB, HMDB | Phosphatidic acid(20:3/20:3) | SMPDB, HMDB | Phosphatidic acid(20:3n9/20:3n6) | SMPDB, HMDB | Phosphatidic acid(20:3w9/20:3w6) | SMPDB, HMDB | Phosphatidic acid(40:6) | SMPDB, HMDB | Phosphatidate(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) | SMPDB, HMDB | Phosphatidate(20:3/20:3) | SMPDB, HMDB | Phosphatidate(20:3n9/20:3n6) | SMPDB, HMDB | Phosphatidate(20:3w9/20:3w6) | SMPDB, HMDB | Phosphatidate(40:6) | SMPDB, HMDB | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) | SMPDB | [(2R)-3-[(5Z,8Z,11Z)-Icosa-5,8,11-trienoyloxy]-2-[(8Z,11Z,14Z)-icosa-8,11,14-trienoyloxy]propoxy]phosphonate | Generator, HMDB |
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Chemical Formula | C43H73O8P |
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Average Molecular Weight | 749.023 |
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Monoisotopic Molecular Weight | 748.504306309 |
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IUPAC Name | [(2R)-3-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]-2-[(8Z,11Z,14Z)-icosa-8,11,14-trienoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]-2-[(8Z,11Z,14Z)-icosa-8,11,14-trienoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC |
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InChI Identifier | InChI=1S/C43H73O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-42(44)49-39-41(40-50-52(46,47)48)51-43(45)38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h12,14,17-20,23-26,29,31,41H,3-11,13,15-16,21-22,27-28,30,32-40H2,1-2H3,(H2,46,47,48)/b14-12-,19-17-,20-18-,25-23-,26-24-,31-29-/t41-/m1/s1 |
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InChI Key | OBFLXCYBNNVNDS-DBTVDUBJSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/18:2(9Z,12Z)/18:2(9Z,12Z)) (PathBank: SMP0029572)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/18:2(9Z,12Z)) (PathBank: SMP0034903)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0034904)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0034905)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0034906)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:2(11Z,14Z)) (PathBank: SMP0034907)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:3(5Z,8Z,11Z)) (PathBank: SMP0034908)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0034909)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0034910)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0034911)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0034912)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:1(13Z)) (PathBank: SMP0034913)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:2(13Z,16Z)) (PathBank: SMP0034914)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0034915)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0034916)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0034917)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0034918)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/24:1(15Z)) (PathBank: SMP0034919)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/22:0) (PathBank: SMP0067862)
- De Novo Triacylglycerol Biosynthesis TG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/24:0) (PathBank: SMP0067869)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0086675)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0086676)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0086677)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086678)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0086679)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0086680)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086681)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0086682)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086683)
- Cardiolipin Biosynthesis CL(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086684)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC | 5396.1 | Standard polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC | 4595.9 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC | 5314.0 | Semi standard non polar | 33892256 |
DerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5338.7 | Semi standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 4704.2 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C | 5488.8 | Standard polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 5318.5 | Semi standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4668.7 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4820.6 | Standard polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5551.9 | Semi standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 4811.7 | Standard non polar | 33892256 | PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\CCCCCCC(=O)O[C@H](COC(=O)CCC/C=C\C/C=C\C/C=C\CCCCCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5493.3 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-000e-1153903600-82952701b820fffabe69 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-000b-4296634200-f59359e4d7db5b74abe2 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-0002-1159124000-fe91261ed10a7df6fe0e | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 10V, Negative-QTOF | splash10-0a71-8089700600-846266aedd6fb52318c2 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 20V, Negative-QTOF | splash10-004i-9022000000-e319d07b748400128487 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 40V, Negative-QTOF | splash10-004i-9000000000-cdb4cfad11228689d367 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 10V, Negative-QTOF | splash10-0002-0000000900-21194b677cfc246e25b0 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 20V, Negative-QTOF | splash10-052e-1106700900-9cb5b6dfaef284a7db87 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 40V, Negative-QTOF | splash10-0a4i-1109300100-6de35646ed34675acf14 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-00di-0000000900-8a9781fb0eb02f3c5f74 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-00di-0000009900-1b29abe610d539f1fcb5 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-00xr-0000904600-2b3c619e366ef3c7fe7f | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-001j-0000000900-ae7430b3d3c19c2ff546 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-0f6t-0000005900-47901d33f4a90360f76b | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-0udl-0000609300-d99b3eafd70e81e1dba7 | 2021-09-22 | Wishart Lab | View Spectrum |
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