Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 04:52:01 UTC |
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Update Date | 2022-11-30 19:26:13 UTC |
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HMDB ID | HMDB0115499 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) |
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Description | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)), in particular, consists of one chain of arachidonic acid at the C-1 position and one chain of dihomo-gamma-linolenic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC InChI=1S/C43H71O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-42(44)49-39-41(40-50-52(46,47)48)51-43(45)38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h11-14,17-20,23-26,29,31,41H,3-10,15-16,21-22,27-28,30,32-40H2,1-2H3,(H2,46,47,48)/b13-11-,14-12-,19-17-,20-18-,25-23-,26-24-,31-29-/t41-/m1/s1 |
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Synonyms | Value | Source |
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1-arachidonoyl-2-dihomo-gamma-linolenoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-arachidonoyl-2-dihomo-gamma-linolenoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:4/20:3) | SMPDB, HMDB | PA(20:4n6/20:3n6) | SMPDB, HMDB | PA(20:4w6/20:3w6) | SMPDB, HMDB | PA(40:7) | SMPDB, HMDB | Phosphatidic acid(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) | SMPDB, HMDB | Phosphatidic acid(20:4/20:3) | SMPDB, HMDB | Phosphatidic acid(20:4n6/20:3n6) | SMPDB, HMDB | Phosphatidic acid(20:4w6/20:3w6) | SMPDB, HMDB | Phosphatidic acid(40:7) | SMPDB, HMDB | Phosphatidate(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) | SMPDB, HMDB | Phosphatidate(20:4/20:3) | SMPDB, HMDB | Phosphatidate(20:4n6/20:3n6) | SMPDB, HMDB | Phosphatidate(20:4w6/20:3w6) | SMPDB, HMDB | Phosphatidate(40:7) | SMPDB, HMDB | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) | SMPDB |
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Chemical Formula | C43H71O8P |
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Average Molecular Weight | 747.007 |
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Monoisotopic Molecular Weight | 746.488656244 |
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IUPAC Name | [(2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-2-[(8Z,11Z,14Z)-icosa-8,11,14-trienoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-2-[(8Z,11Z,14Z)-icosa-8,11,14-trienoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC |
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InChI Identifier | InChI=1S/C43H71O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-42(44)49-39-41(40-50-52(46,47)48)51-43(45)38-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h11-14,17-20,23-26,29,31,41H,3-10,15-16,21-22,27-28,30,32-40H2,1-2H3,(H2,46,47,48)/b13-11-,14-12-,19-17-,20-18-,25-23-,26-24-,31-29-/t41-/m1/s1 |
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InChI Key | ZXGHGCCKGRMBMJ-PZGVQGCDSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/18:2(9Z,12Z)/16:1(9Z)) (PathBank: SMP0029698)
- Cardiolipin Biosynthesis CL(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/18:2(9Z,12Z)/18:2(9Z,12Z)) (PathBank: SMP0029699)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0035273)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0035274)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0035275)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0035276)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0035277)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/22:2(13Z,16Z)) (PathBank: SMP0035278)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0035279)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0035280)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0035281)
- De Novo Triacylglycerol Biosynthesis TG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0035282)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC | 5550.2 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC | 4594.4 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/CCCCC | 5317.7 | Semi standard non polar | 33892256 |
DerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 5352.7 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 4715.1 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 5308.0 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 5316.3 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 4678.5 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 4688.3 | Standard polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 5560.3 | Semi standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 4832.7 | Standard non polar | 33892256 | PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCC/C=C\C/C=C\C/C=C\CCCCC | 5327.7 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-000e-1164903600-30dce1dd9c716627ea1b | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-000e-3295524100-61783218a4727aa949ac | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-0002-1179224000-74dd8bd8daa20cbe7b53 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 10V, Negative-QTOF | splash10-0f9j-8089700600-3557d951aa90a7be509c | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 20V, Negative-QTOF | splash10-004i-9022000000-b21566c2cfa816f1c935 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 40V, Negative-QTOF | splash10-004i-9000000000-072d9626c44965636ae0 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 10V, Negative-QTOF | splash10-0002-0000000900-2da6b7d200634fb246fa | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 20V, Negative-QTOF | splash10-0pbm-0006900400-f6c5c6797ca4817ead64 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 40V, Negative-QTOF | splash10-0zfr-0009300000-48a81404acbccb561777 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-004j-0000000900-d580669eb885ca628a37 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-0002-0000005900-af4a6a19118f5cbeca4a | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-0007-0000906200-2f9fcf7b418b05734ac5 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-014i-0000000900-dd40129350790c872237 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-01i0-0000009900-4abfd8987f657ec365a4 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-0159-0000902300-3c3aba09f23279707eed | 2021-09-23 | Wishart Lab | View Spectrum |
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