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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2017-09-13 02:14:49 UTC
Update Date2023-02-21 17:31:31 UTC
HMDB IDHMDB0125533
Secondary Accession NumbersNone
Metabolite Identification
Common Name3,5-Dihydroxyphenylpropionic acid
Description3,5-Dihydroxyphenylpropionic acid (3,5-DHPPA) is an alkylresorcinol metabolite. It is a potential urinary biomarker of whole grain intake (PMID: 15282102 ). BioTransformer predicts that 3,5-DHPPA is a product of 3,5-dihydroxycinnamic acid metabolism via a reduction-of-alpha-beta-unsaturated-compounds-pattern1 reaction occurring in human gut microbiota and catalyzed by the abkar1 enzyme (PMID: 30612223 ).
Structure
Data?1677000691
Synonyms
ValueSource
3,5-DihydroxyphenylpropionateGenerator
3-(3,5-Dihydroxyphenyl)propanoateGenerator
3,5-DHPPAHMDB
3,5-Dihydroxybenzenepropionic acidHMDB
3,5-Dihydroxyphenylpropanoic acidHMDB
3,5-Dihydroxyphenylpropionic acidHMDB
3-(3,5-Dihydroxyphenyl)-1-propanoic acidHMDB
3-(3,5-Dihydroxyphenyl)-1-propionic acidHMDB
3-(3',5'-Dihydroxyphenyl)propanoic acidHMDB
3-(3,5-Dihydroxyphenyl)propanoic acidHMDB
3-(3,5-Dihydroxyphenyl)propanoic acid;HMDB
Chemical FormulaC9H10O4
Average Molecular Weight182.175
Monoisotopic Molecular Weight182.057908802
IUPAC Name3-(3,5-dihydroxyphenyl)propanoic acid
Traditional Name3-(3,5-dihydroxyphenyl)propanoic acid
CAS Registry Number26539-01-5
SMILES
OC(=O)CCC1=CC(O)=CC(O)=C1
InChI Identifier
InChI=1S/C9H10O4/c10-7-3-6(1-2-9(12)13)4-8(11)5-7/h3-5,10-11H,1-2H2,(H,12,13)
InChI KeyITPFIKQWNDGDLG-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylpropanoic acids. Phenylpropanoic acids are compounds with a structure containing a benzene ring conjugated to a propanoic acid.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassPhenylpropanoic acids
Sub ClassNot Available
Direct ParentPhenylpropanoic acids
Alternative Parents
Substituents
  • 3-phenylpropanoic-acid
  • Resorcinol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Carbonyl group
  • Organic oxygen compound
  • Organooxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationSource
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.99ALOGPS
logP1.45ChemAxon
logS-1.8ALOGPS
pKa (Strongest Acidic)3.82ChemAxon
pKa (Strongest Basic)-5.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity45.93 m³·mol⁻¹ChemAxon
Polarizability17.89 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+141.96431661259
DarkChem[M-H]-138.86631661259
DeepCCS[M+H]+135.92130932474
DeepCCS[M-H]-132.93930932474
DeepCCS[M-2H]-169.97430932474
DeepCCS[M+Na]+145.51330932474
AllCCS[M+H]+139.132859911
AllCCS[M+H-H2O]+134.932859911
AllCCS[M+NH4]+143.132859911
AllCCS[M+Na]+144.232859911
AllCCS[M-H]-136.632859911
AllCCS[M+Na-2H]-137.432859911
AllCCS[M+HCOO]-138.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3,5-Dihydroxyphenylpropionic acidOC(=O)CCC1=CC(O)=CC(O)=C13411.0Standard polar33892256
3,5-Dihydroxyphenylpropionic acidOC(=O)CCC1=CC(O)=CC(O)=C11894.0Standard non polar33892256
3,5-Dihydroxyphenylpropionic acidOC(=O)CCC1=CC(O)=CC(O)=C11986.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3,5-Dihydroxyphenylpropionic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)CCC1=CC(O)=CC(O)=C12026.9Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,1TMS,isomer #2C[Si](C)(C)OC1=CC(O)=CC(CCC(=O)O)=C11979.5Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CCC1=CC(O)=CC(O[Si](C)(C)C)=C12003.0Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,2TMS,isomer #2C[Si](C)(C)OC1=CC(CCC(=O)O)=CC(O[Si](C)(C)C)=C11984.4Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CCC1=CC(O[Si](C)(C)C)=CC(O[Si](C)(C)C)=C11978.1Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC1=CC(O)=CC(O)=C12268.8Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC(O)=CC(CCC(=O)O)=C12218.6Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC1=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C12453.3Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC(CCC(=O)O)=CC(O[Si](C)(C)C(C)(C)C)=C12457.3Semi standard non polar33892256
3,5-Dihydroxyphenylpropionic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC1=CC(O[Si](C)(C)C(C)(C)C)=CC(O[Si](C)(C)C(C)(C)C)=C12663.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-Dihydroxyphenylpropionic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0080-1900000000-a7da1bd2dfb09541aa862017-07-27Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-Dihydroxyphenylpropionic acid GC-MS (3 TMS) - 70eV, Positivesplash10-010r-9055000000-e5c05de39f53cb40bc532017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-Dihydroxyphenylpropionic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 10V, Positive-QTOFsplash10-00lr-0900000000-4b763ab5e9795472fe392017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 20V, Positive-QTOFsplash10-00li-1900000000-377ffebc50146a6e89e82017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 40V, Positive-QTOFsplash10-0fri-9800000000-2e82de879aeb36a7a3672017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 10V, Negative-QTOFsplash10-001i-0900000000-3c6dfe18bf51db167b532017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 20V, Negative-QTOFsplash10-001i-0900000000-a81d1dc98f5be380aef52017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 40V, Negative-QTOFsplash10-01pc-4900000000-247ffd87c4a9f77fc1952017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 10V, Positive-QTOFsplash10-00y0-0900000000-c28e45417cd4f7cf76ac2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 20V, Positive-QTOFsplash10-0080-2900000000-3e4e0453b895a825828c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 40V, Positive-QTOFsplash10-0kas-9200000000-101d0967b2925794e2ba2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 10V, Negative-QTOFsplash10-001i-0900000000-342e0859267fcbe95f962021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 20V, Negative-QTOFsplash10-000i-0900000000-f3d5a71bfcb2af4a9f6d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-Dihydroxyphenylpropionic acid 40V, Negative-QTOFsplash10-052u-4900000000-73b016b632e4bbefc9be2021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB084412
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound161525
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Ross AB, Aman P, Kamal-Eldin A: Identification of cereal alkylresorcinol metabolites in human urine-potential biomarkers of wholegrain wheat and rye intake. J Chromatogr B Analyt Technol Biomed Life Sci. 2004 Sep 25;809(1):125-30. doi: 10.1016/j.jchromb.2004.06.015. [PubMed:15282102 ]
  2. Djoumbou-Feunang Y, Fiamoncini J, Gil-de-la-Fuente A, Greiner R, Manach C, Wishart DS: BioTransformer: a comprehensive computational tool for small molecule metabolism prediction and metabolite identification. J Cheminform. 2019 Jan 5;11(1):2. doi: 10.1186/s13321-018-0324-5. [PubMed:30612223 ]
  3. Koistinen VM (2019). Effects of Food Processing and Gut Microbial Metabolism on Whole Grain Phytochemicals: A Metabolomics Approach. In Publications of the University of Eastern Finland. Dissertations in Health Sciences., no 510 (pp. 26-58). University of Eastern Finland. [ISBN:978-952-61-3088-0 ]

Enzymes

General function:
Involved in transferase activity, transferring hexosyl groups
Specific function:
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isoform glucuronidates bilirubin IX-alpha to form both the IX-alpha-C8 and IX-alpha-C12 monoconjugates and diconjugate. Is also able to catalyze the glucuronidation of 17beta-estradiol, 17alpha-ethinylestradiol, 1-hydroxypyrene, 4-methylumbelliferone, 1-naphthol, paranitrophenol, scopoletin, and umbelliferone.
Gene Name:
UGT1A1
Uniprot ID:
P22309
Molecular weight:
59590.91
Reactions
3,5-Dihydroxyphenylpropionic acid → 6-[3-(2-carboxyethyl)-5-hydroxyphenoxy]-3,4,5-trihydroxyoxane-2-carboxylic aciddetails
3,5-Dihydroxyphenylpropionic acid → 6-{[3-(3,5-dihydroxyphenyl)propanoyl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic aciddetails