Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 17:07:35 UTC
Update Date2021-09-23 17:07:35 UTC
HMDB IDHMDB0302352
Secondary Accession NumbersNone
Metabolite Identification
Common NameOct-trans-2-en-1-ol
DescriptionOct-trans-2-en-1-ol is a member of the class of compounds known as fatty alcohols. Fatty alcohols are aliphatic alcohols consisting of a chain of a least six carbon atoms. Thus, oct-trans-2-en-1-ol is considered to be a fatty alcohol lipid molecule. Oct-trans-2-en-1-ol is slightly soluble (in water) and an extremely weak acidic compound (based on its pKa). Oct-trans-2-en-1-ol can be found in corn, oat, and watermelon, which makes oct-trans-2-en-1-ol a potential biomarker for the consumption of these food products.
Structure
Thumb
Synonyms
ValueSource
(e)-2-OctenolChEBI
(e)-Oct-2-enolChEBI
trans-2-Octen-1-olChEBI
trans-Oct-2-en-1-olChEBI
Chemical FormulaC8H16O
Average Molecular Weight128.215
Monoisotopic Molecular Weight128.120115135
IUPAC Name(2E)-oct-2-en-1-ol
Traditional Name(2E)-oct-2-en-1-ol
CAS Registry NumberNot Available
SMILES
[H]\C(CO)=C(\[H])CCCCC
InChI Identifier
InChI=1S/C8H16O/c1-2-3-4-5-6-7-8-9/h6-7,9H,2-5,8H2,1H3/b7-6+
InChI KeyAYQPVPFZWIQERS-VOTSOKGWSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty alcohols. These are aliphatic alcohols consisting of a chain of a least six carbon atoms.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty alcohols
Direct ParentFatty alcohols
Alternative Parents
Substituents
  • Fatty alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.89ALOGPS
logP2.38ChemAxon
logS-2ALOGPS
pKa (Strongest Acidic)16.08ChemAxon
pKa (Strongest Basic)-2.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity41.5 m³·mol⁻¹ChemAxon
Polarizability16.56 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+131.91932859911
AllCCS[M+H-H2O]+127.71932859911
AllCCS[M+Na]+136.96332859911
AllCCS[M+NH4]+135.83432859911
AllCCS[M-H]-136.08632859911
AllCCS[M+Na-2H]-138.82132859911
AllCCS[M+HCOO]-141.88232859911
DeepCCS[M+H]+137.23530932474
DeepCCS[M-H]-134.84930932474
DeepCCS[M-2H]-170.01330932474
DeepCCS[M+Na]+144.2730932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 10V, Positive-QTOFsplash10-03fr-1900000000-fedce33772cacafa9e222016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 20V, Positive-QTOFsplash10-03di-6900000000-e960b9c9d9a0c93b827b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 40V, Positive-QTOFsplash10-052f-9000000000-4713a4951d9f54daca752016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 10V, Negative-QTOFsplash10-004i-2900000000-dbeb18da728a3c1ef0a82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 20V, Negative-QTOFsplash10-004i-5900000000-13b1fdd52e2a4f9679782016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 40V, Negative-QTOFsplash10-052g-9100000000-fd3f4f266369266ecd102016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 10V, Positive-QTOFsplash10-0api-9100000000-95ec3cc0fb8cb7072cc52021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 20V, Positive-QTOFsplash10-0aou-9000000000-33b257678623b26b54cd2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 40V, Positive-QTOFsplash10-0apl-9000000000-feea5069a343be1c7ee92021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 10V, Negative-QTOFsplash10-004i-0900000000-e8448bc978ba2df6edde2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 20V, Negative-QTOFsplash10-0a4i-2900000000-6a76a247b425d76985db2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Oct-trans-2-en-1-ol 40V, Negative-QTOFsplash10-0gb9-9100000000-0b7e6a5d1be41420b2412021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB004240
KNApSAcK IDC00055580
Chemspider ID4477134
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID142616
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1048181
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available