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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 23:13:56 UTC
Update Date2021-09-23 23:13:57 UTC
HMDB IDHMDB0303089
Secondary Accession NumbersNone
Metabolite Identification
Common Name10-Gingerdione
Description10-gingerdione is a member of the class of compounds known as methoxyphenols. Methoxyphenols are compounds containing a methoxy group attached to the benzene ring of a phenol moiety. 10-gingerdione is practically insoluble (in water) and a very weakly acidic compound (based on its pKa). 10-gingerdione can be found in ginger, which makes 10-gingerdione a potential biomarker for the consumption of this food product.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC21H32O4
Average Molecular Weight348.4764
Monoisotopic Molecular Weight348.230059512
IUPAC Name(3Z)-3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)tetradec-3-en-5-one
Traditional Name(3Z)-3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)tetradec-3-en-5-one
CAS Registry NumberNot Available
SMILES
CCCCCCCCCC(=O)\C=C(/O)CCC1=CC(OC)=C(O)C=C1
InChI Identifier
InChI=1S/C21H32O4/c1-3-4-5-6-7-8-9-10-18(22)16-19(23)13-11-17-12-14-20(24)21(15-17)25-2/h12,14-16,23-24H,3-11,13H2,1-2H3/b19-16-
InChI KeyZDFMHONYMPZGOT-MNDPQUGUSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as methoxyphenols. Methoxyphenols are compounds containing a methoxy group attached to the benzene ring of a phenol moiety.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenols
Sub ClassMethoxyphenols
Direct ParentMethoxyphenols
Alternative Parents
Substituents
  • Methoxyphenol
  • Anisole
  • Phenoxy compound
  • Phenol ether
  • Methoxybenzene
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • Vinylogous acid
  • Alpha,beta-unsaturated ketone
  • Acryloyl-group
  • Enone
  • Ketone
  • Ether
  • Enol
  • Organooxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.3ALOGPS
logP5.8ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)8.39ChemAxon
pKa (Strongest Basic)-4.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area66.76 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity103.14 m³·mol⁻¹ChemAxon
Polarizability41.54 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+192.28432859911
AllCCS[M+H-H2O]+189.48132859911
AllCCS[M+Na]+195.61732859911
AllCCS[M+NH4]+194.87432859911
AllCCS[M-H]-191.88632859911
AllCCS[M+Na-2H]-193.48632859911
AllCCS[M+HCOO]-195.432859911
DeepCCS[M+H]+197.63730932474
DeepCCS[M-H]-195.08630932474
DeepCCS[M-2H]-228.30630932474
DeepCCS[M+Na]+204.93530932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
10-Gingerdione,3TMS,isomer #1CCCCCCCCC=C(/C=C(/CCC1=CC=C(O[Si](C)(C)C)C(OC)=C1)O[Si](C)(C)C)O[Si](C)(C)C2997.2Semi standard non polar33892256
10-Gingerdione,3TMS,isomer #1CCCCCCCCC=C(/C=C(/CCC1=CC=C(O[Si](C)(C)C)C(OC)=C1)O[Si](C)(C)C)O[Si](C)(C)C2810.9Standard non polar33892256
10-Gingerdione,3TMS,isomer #1CCCCCCCCC=C(/C=C(/CCC1=CC=C(O[Si](C)(C)C)C(OC)=C1)O[Si](C)(C)C)O[Si](C)(C)C3016.8Standard polar33892256
10-Gingerdione,3TBDMS,isomer #1CCCCCCCCC=C(/C=C(/CCC1=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C1)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3707.8Semi standard non polar33892256
10-Gingerdione,3TBDMS,isomer #1CCCCCCCCC=C(/C=C(/CCC1=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C1)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3298.6Standard non polar33892256
10-Gingerdione,3TBDMS,isomer #1CCCCCCCCC=C(/C=C(/CCC1=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C1)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3238.8Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 10V, Positive-QTOFsplash10-0002-0609000000-94481020fbbafedb496d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 20V, Positive-QTOFsplash10-0kdr-1901000000-a096cd268f911db8baec2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 40V, Positive-QTOFsplash10-052o-6910000000-97c9cd5adb88113a4da82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 10V, Negative-QTOFsplash10-00kb-0907000000-a1901b8de75e96abfca22016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 20V, Negative-QTOFsplash10-014i-0901000000-fec19d0cfb7936c3b30f2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 40V, Negative-QTOFsplash10-014i-3910000000-01f18adf7d43219728282016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 10V, Positive-QTOFsplash10-0002-0918000000-ab963afe8019a4b311ed2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 20V, Positive-QTOFsplash10-000i-1921000000-86be6143e06e5d178aa42021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 40V, Positive-QTOFsplash10-001c-9800000000-fc8977be4763fdf79bf42021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 10V, Negative-QTOFsplash10-0fxt-0904000000-e4b9d91f598d7d0b28a22021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 20V, Negative-QTOFsplash10-002v-2902000000-77f78c1a6b30edd435f12021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10-Gingerdione 40V, Negative-QTOFsplash10-009i-3900000000-2dc810b2ca2bcc47103b2021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB007719
KNApSAcK IDNot Available
Chemspider ID4476435
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5317591
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available